Protein–RNA interactions for Protein: P97334

Nkx2-3, Homeobox protein Nkx-2.3, mousemouse

Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-3P97334 Ceacam16-201ENSMUST00000014830 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Nkx2-3P97334 Psmd12-201ENSMUST00000021063 1904 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Nkx2-3P97334 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
Nkx2-3P97334 Sec24a-203ENSMUST00000109092 2094 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Nkx2-3P97334 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
Nkx2-3P97334 Tyw1-203ENSMUST00000100662 1867 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Nkx2-3P97334 Gm13134-202ENSMUST00000144347 387 ntTSL 2 BASIC18.53■□□□□ 0.56
Nkx2-3P97334 Gm12446-202ENSMUST00000152069 713 ntTSL 2 BASIC18.53■□□□□ 0.56
Nkx2-3P97334 Gm13568-201ENSMUST00000156099 446 ntTSL 5 BASIC18.53■□□□□ 0.56
Nkx2-3P97334 Gm26560-201ENSMUST00000181240 2619 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Nkx2-3P97334 Rgs6-216ENSMUST00000200911 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Nkx2-3P97334 Gm6916-202ENSMUST00000205523 195 ntBASIC18.53■□□□□ 0.56
Nkx2-3P97334 Gm45751-201ENSMUST00000210185 1573 ntBASIC18.53■□□□□ 0.56
Nkx2-3P97334 Prrg2-207ENSMUST00000210500 922 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
Nkx2-3P97334 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Nkx2-3P97334 Mpc1-201ENSMUST00000046754 920 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
Nkx2-3P97334 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Nkx2-3P97334 Gm13074-201ENSMUST00000124848 2735 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Nkx2-3P97334 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Nkx2-3P97334 Gm5763-201ENSMUST00000155951 1530 ntBASIC18.53■□□□□ 0.56
Nkx2-3P97334 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Nkx2-3P97334 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
Nkx2-3P97334 Acp6-201ENSMUST00000090759 1754 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Nkx2-3P97334 Zbed5-201ENSMUST00000041466 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Nkx2-3P97334 Etfrf1-205ENSMUST00000111724 1618 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Nkx2-3P97334 Dhrs1-201ENSMUST00000002403 1477 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Nkx2-3P97334 Eef1d-204ENSMUST00000089681 2152 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Nkx2-3P97334 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Nkx2-3P97334 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
Nkx2-3P97334 Cant1-202ENSMUST00000092378 2995 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Nkx2-3P97334 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC18.52■□□□□ 0.56
Nkx2-3P97334 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
Nkx2-3P97334 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Nkx2-3P97334 Ube2j2-206ENSMUST00000118192 922 ntTSL 5 BASIC18.52■□□□□ 0.56
Nkx2-3P97334 Gm7820-201ENSMUST00000121012 1052 ntBASIC18.52■□□□□ 0.56
Nkx2-3P97334 Tmem109-207ENSMUST00000147699 1096 ntTSL 2 BASIC18.52■□□□□ 0.56
Nkx2-3P97334 Mpv17-207ENSMUST00000201491 923 ntTSL 2 BASIC18.52■□□□□ 0.56
Nkx2-3P97334 Gm40193-201ENSMUST00000209971 237 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
Nkx2-3P97334 AC154239.3-201ENSMUST00000226933 674 ntBASIC18.52■□□□□ 0.56
Nkx2-3P97334 Uts2-201ENSMUST00000030803 538 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Nkx2-3P97334 Selenow-201ENSMUST00000044355 736 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Nkx2-3P97334 Zmat5-201ENSMUST00000009220 792 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Nkx2-3P97334 Tmem107-202ENSMUST00000094081 1263 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Nkx2-3P97334 Ginm1-204ENSMUST00000124838 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Nkx2-3P97334 Fkbp10-201ENSMUST00000001595 2584 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Nkx2-3P97334 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Nkx2-3P97334 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
Nkx2-3P97334 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Nkx2-3P97334 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.55
Nkx2-3P97334 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Nkx2-3P97334 Prelid1-201ENSMUST00000021942 2644 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Nkx2-3P97334 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Nkx2-3P97334 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.55
Nkx2-3P97334 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Nkx2-3P97334 Mospd3-202ENSMUST00000111007 1318 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Nkx2-3P97334 Sp2-203ENSMUST00000107624 3055 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Nkx2-3P97334 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Nkx2-3P97334 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Nkx2-3P97334 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC18.51■□□□□ 0.55
Nkx2-3P97334 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Nkx2-3P97334 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Nkx2-3P97334 Fbxo27-202ENSMUST00000108280 2031 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Nkx2-3P97334 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Nkx2-3P97334 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Nkx2-3P97334 Mcrs1-202ENSMUST00000163506 1795 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Nkx2-3P97334 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Nkx2-3P97334 Gm11555-202ENSMUST00000104929 638 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
Nkx2-3P97334 Rdm1-201ENSMUST00000010506 1124 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Nkx2-3P97334 Tmem128-202ENSMUST00000119047 726 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Nkx2-3P97334 Naxd-205ENSMUST00000178721 1108 ntTSL 5 BASIC18.51■□□□□ 0.55
Nkx2-3P97334 Gm6745-201ENSMUST00000199216 526 ntBASIC18.51■□□□□ 0.55
Nkx2-3P97334 Gm45059-201ENSMUST00000205558 1077 ntBASIC18.51■□□□□ 0.55
Nkx2-3P97334 Gm9908-201ENSMUST00000211534 448 ntBASIC18.51■□□□□ 0.55
Nkx2-3P97334 AC156016.3-201ENSMUST00000228623 344 ntBASIC18.51■□□□□ 0.55
Nkx2-3P97334 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC18.51■□□□□ 0.55
Nkx2-3P97334 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Nkx2-3P97334 Unc93b1-204ENSMUST00000165711 1991 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
Nkx2-3P97334 Bscl2-201ENSMUST00000086058 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Nkx2-3P97334 Trim68-205ENSMUST00000210855 2301 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Nkx2-3P97334 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Nkx2-3P97334 Ppia-206ENSMUST00000213200 1450 ntTSL 5 BASIC18.51■□□□□ 0.55
Nkx2-3P97334 Tmem59l-201ENSMUST00000045286 1491 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Nkx2-3P97334 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC18.51■□□□□ 0.55
Nkx2-3P97334 Gm42918-201ENSMUST00000199249 1580 ntBASIC18.51■□□□□ 0.55
Nkx2-3P97334 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Nkx2-3P97334 Hs3st5-201ENSMUST00000058738 3078 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Nkx2-3P97334 Tmprss12-201ENSMUST00000096200 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Nkx2-3P97334 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
Nkx2-3P97334 Gm10110-201ENSMUST00000081204 1891 ntTSL 5 BASIC18.5■□□□□ 0.55
Nkx2-3P97334 Mthfsd-202ENSMUST00000116415 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Nkx2-3P97334 Grik2-210ENSMUST00000220263 2085 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Nkx2-3P97334 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC18.5■□□□□ 0.55
Nkx2-3P97334 1600025M17Rik-202ENSMUST00000151426 547 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Nkx2-3P97334 Fbxw4-204ENSMUST00000160018 931 ntTSL 3 BASIC18.5■□□□□ 0.55
Nkx2-3P97334 U2af1l4-216ENSMUST00000166510 835 ntTSL 5 BASIC18.5■□□□□ 0.55
Nkx2-3P97334 9230114J08Rik-201ENSMUST00000200375 350 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Nkx2-3P97334 Tm2d3-207ENSMUST00000206517 905 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
Nkx2-3P97334 AC132467.2-202ENSMUST00000227726 559 ntBASIC18.5■□□□□ 0.55
Nkx2-3P97334 AC123645.1-201ENSMUST00000228469 605 ntBASIC18.5■□□□□ 0.55
Nkx2-3P97334 Gm5519-201ENSMUST00000042061 513 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 39.5 ms