Protein–RNA interactions for Protein: P70278

Stra8, Stimulated by retinoic acid gene 8 protein, mousemouse

Predictions only

Length 393 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Stra8P70278 Skap1-205ENSMUST00000107662 1861 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Stra8P70278 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Stra8P70278 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC20.48■□□□□ 0.87
Stra8P70278 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC20.48■□□□□ 0.87
Stra8P70278 Gm23547-201ENSMUST00000158210 271 ntBASIC20.48■□□□□ 0.87
Stra8P70278 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC20.48■□□□□ 0.87
Stra8P70278 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC20.48■□□□□ 0.87
Stra8P70278 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC20.48■□□□□ 0.87
Stra8P70278 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC20.48■□□□□ 0.87
Stra8P70278 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Stra8P70278 AC158538.2-201ENSMUST00000225455 906 ntBASIC20.48■□□□□ 0.87
Stra8P70278 Sf1-204ENSMUST00000113489 2863 ntTSL 5 BASIC20.48■□□□□ 0.87
Stra8P70278 Dtd2-201ENSMUST00000021339 2564 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Stra8P70278 Fgfr3-210ENSMUST00000169212 4245 ntAPPRIS P4 TSL 1 (best) BASIC20.48■□□□□ 0.87
Stra8P70278 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC20.48■□□□□ 0.87
Stra8P70278 Chd4-203ENSMUST00000112392 6652 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
Stra8P70278 Arhgef33-201ENSMUST00000068175 3260 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
Stra8P70278 Edn3-201ENSMUST00000029030 3117 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Stra8P70278 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Stra8P70278 Lix1l-201ENSMUST00000062058 3312 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Stra8P70278 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Stra8P70278 Pid1-207ENSMUST00000177458 2521 ntTSL 2 BASIC20.48■□□□□ 0.87
Stra8P70278 Fbxo21-201ENSMUST00000035579 3883 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Stra8P70278 Dlg1-201ENSMUST00000023454 3725 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Stra8P70278 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC20.48■□□□□ 0.87
Stra8P70278 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Stra8P70278 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
Stra8P70278 Pbx3-201ENSMUST00000040638 2587 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
Stra8P70278 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Stra8P70278 Syndig1-201ENSMUST00000109934 2081 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
Stra8P70278 Camkk2-201ENSMUST00000111668 4861 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Stra8P70278 Irx3os-201ENSMUST00000062522 2988 ntTSL 5 BASIC20.47■□□□□ 0.87
Stra8P70278 Dym-201ENSMUST00000039608 2471 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Stra8P70278 Stx5a-201ENSMUST00000010254 1780 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
Stra8P70278 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Stra8P70278 AC162938.1-201ENSMUST00000213140 2323 ntBASIC20.47■□□□□ 0.87
Stra8P70278 Mbp-202ENSMUST00000062446 2186 ntAPPRIS P4 TSL 1 (best) BASIC20.47■□□□□ 0.87
Stra8P70278 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC20.47■□□□□ 0.87
Stra8P70278 Gm12008-201ENSMUST00000117791 755 ntBASIC20.47■□□□□ 0.87
Stra8P70278 Zfp524-202ENSMUST00000207901 1263 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
Stra8P70278 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Stra8P70278 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
Stra8P70278 Glb1-201ENSMUST00000063042 2396 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Stra8P70278 Zfp839-201ENSMUST00000170060 3723 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Stra8P70278 Nfasc-201ENSMUST00000043189 5072 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Stra8P70278 Lpcat2-201ENSMUST00000046290 2811 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Stra8P70278 Olfr718-ps1-202ENSMUST00000213631 4737 ntAPPRIS P5 TSL 5 BASIC20.47■□□□□ 0.87
Stra8P70278 Aarsd1-201ENSMUST00000070395 1516 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Stra8P70278 Celf4-206ENSMUST00000224553 1729 ntBASIC20.47■□□□□ 0.87
Stra8P70278 Chuk-201ENSMUST00000026217 3502 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Stra8P70278 Fzd7-201ENSMUST00000114246 4532 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
Stra8P70278 Knop1-204ENSMUST00000106550 5524 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
Stra8P70278 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Stra8P70278 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Stra8P70278 Acin1-201ENSMUST00000022793 4735 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
Stra8P70278 Gm13884-201ENSMUST00000118103 829 ntBASIC20.46■□□□□ 0.87
Stra8P70278 Gm11780-201ENSMUST00000136880 516 ntBASIC20.46■□□□□ 0.87
Stra8P70278 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Stra8P70278 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC20.46■□□□□ 0.87
Stra8P70278 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC20.46■□□□□ 0.87
Stra8P70278 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
Stra8P70278 Gm7461-201ENSMUST00000058918 827 ntBASIC20.46■□□□□ 0.87
Stra8P70278 Rps4l-201ENSMUST00000071745 943 ntBASIC20.46■□□□□ 0.87
Stra8P70278 Dtx3-201ENSMUST00000038217 1944 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Stra8P70278 Rnf123-214ENSMUST00000162355 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Stra8P70278 Pax7-201ENSMUST00000030508 5854 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Stra8P70278 Unc93b1-204ENSMUST00000165711 1991 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
Stra8P70278 Slc35a2-202ENSMUST00000115660 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Stra8P70278 Cc2d1b-201ENSMUST00000030320 3303 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Stra8P70278 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC20.46■□□□□ 0.87
Stra8P70278 Tnn-201ENSMUST00000039178 5817 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Stra8P70278 Wnk1-203ENSMUST00000088644 11330 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
Stra8P70278 Cep170-205ENSMUST00000192961 2708 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Stra8P70278 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Stra8P70278 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Stra8P70278 Top3b-201ENSMUST00000023465 3073 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Stra8P70278 Eif4g3-215ENSMUST00000203828 5289 ntTSL 5 BASIC20.45■□□□□ 0.86
Stra8P70278 Tomm34-202ENSMUST00000109384 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Stra8P70278 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
Stra8P70278 Pccb-204ENSMUST00000149322 2188 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Stra8P70278 Bag6-201ENSMUST00000025250 3858 ntAPPRIS P3 TSL 5 BASIC20.45■□□□□ 0.86
Stra8P70278 Rxra-202ENSMUST00000100251 1952 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Stra8P70278 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
Stra8P70278 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Stra8P70278 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Stra8P70278 Ccp110-202ENSMUST00000106557 5073 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Stra8P70278 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Stra8P70278 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC20.45■□□□□ 0.86
Stra8P70278 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Stra8P70278 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC20.45■□□□□ 0.86
Stra8P70278 Papd5-203ENSMUST00000119033 4624 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Stra8P70278 Cacna2d1-205ENSMUST00000167946 7436 ntAPPRIS ALT1 TSL 5 BASIC20.45■□□□□ 0.86
Stra8P70278 Gm9932-201ENSMUST00000194154 2116 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Stra8P70278 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Stra8P70278 Irs1-201ENSMUST00000069799 9144 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Stra8P70278 Spcs2-210ENSMUST00000209032 1610 ntTSL 5 BASIC20.45■□□□□ 0.86
Stra8P70278 Pard3-222ENSMUST00000162536 5175 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
Stra8P70278 Slc6a8-203ENSMUST00000114465 3314 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Stra8P70278 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC20.44■□□□□ 0.86
Stra8P70278 Gpr157-201ENSMUST00000094451 4900 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Retrieved 100 of 76,532 protein–RNA pairs in 40.7 ms