Protein–RNA interactions for Protein: P70271

Pdlim4, PDZ and LIM domain protein 4, mousemouse

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim4P70271 Arhgef9-217ENSMUST00000197364 1796 ntTSL 5 BASIC12.35□□□□□ -0.43
Pdlim4P70271 Otop3-202ENSMUST00000106543 2369 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Pdlim4P70271 Gm8242-201ENSMUST00000193029 1420 ntBASIC12.35□□□□□ -0.43
Pdlim4P70271 Pla2g10-201ENSMUST00000023364 1423 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Pdlim4P70271 Pcdha1-201ENSMUST00000070797 5248 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Pdlim4P70271 Spag1-202ENSMUST00000171205 3219 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Pdlim4P70271 Dlx4os-201ENSMUST00000156477 1664 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Pdlim4P70271 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Pdlim4P70271 AC119177.1-201ENSMUST00000227647 1332 ntBASIC12.35□□□□□ -0.43
Pdlim4P70271 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Pdlim4P70271 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Pdlim4P70271 Emp2-201ENSMUST00000078357 3440 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Pdlim4P70271 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Pdlim4P70271 Sbf2-213ENSMUST00000171218 1476 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Pdlim4P70271 9630013D21Rik-204ENSMUST00000156790 3096 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Pdlim4P70271 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Pdlim4P70271 Adrb3-203ENSMUST00000121838 1864 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Pdlim4P70271 Sox17-201ENSMUST00000027035 3127 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Pdlim4P70271 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Pdlim4P70271 Syne4-201ENSMUST00000054594 1355 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Pdlim4P70271 Cyp4f37-201ENSMUST00000077639 2642 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Pdlim4P70271 Plxna1-202ENSMUST00000163139 9034 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Pdlim4P70271 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Pdlim4P70271 Gm21586-201ENSMUST00000107988 264 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Pdlim4P70271 Gm21953-201ENSMUST00000108002 264 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Pdlim4P70271 Gm13375-201ENSMUST00000126967 854 ntTSL 2 BASIC12.34□□□□□ -0.43
Pdlim4P70271 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Pdlim4P70271 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC12.34□□□□□ -0.43
Pdlim4P70271 Spr-ps1-202ENSMUST00000186281 706 ntTSL 2 BASIC12.34□□□□□ -0.43
Pdlim4P70271 Gm8000-201ENSMUST00000188378 592 ntBASIC12.34□□□□□ -0.43
Pdlim4P70271 Tspan18-201ENSMUST00000028646 1203 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Pdlim4P70271 Cda-201ENSMUST00000030535 846 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Pdlim4P70271 Brd2-203ENSMUST00000114242 4483 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Pdlim4P70271 Mael-202ENSMUST00000194057 1691 ntTSL 5 BASIC12.34□□□□□ -0.43
Pdlim4P70271 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Pdlim4P70271 Stxbp1-201ENSMUST00000050000 3892 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Pdlim4P70271 Per1-203ENSMUST00000102605 4537 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Pdlim4P70271 Klhl26-204ENSMUST00000209567 2615 ntTSL 3 BASIC12.34□□□□□ -0.43
Pdlim4P70271 Camkk2-201ENSMUST00000111668 4861 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Pdlim4P70271 Fdx1-202ENSMUST00000214013 2759 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Pdlim4P70271 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Pdlim4P70271 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Pdlim4P70271 Agap1-201ENSMUST00000027521 11921 ntAPPRIS P4 TSL 1 (best) BASIC12.34□□□□□ -0.43
Pdlim4P70271 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.43
Pdlim4P70271 Zfp36l2-201ENSMUST00000060366 3530 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
Pdlim4P70271 Desi2-201ENSMUST00000027783 8802 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
Pdlim4P70271 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Pdlim4P70271 AC174678.1-201ENSMUST00000228007 2749 ntBASIC12.33□□□□□ -0.44
Pdlim4P70271 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Pdlim4P70271 AC131586.3-201ENSMUST00000228355 1367 ntBASIC12.33□□□□□ -0.44
Pdlim4P70271 Adprhl1-201ENSMUST00000033825 1372 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Pdlim4P70271 Ehd4-201ENSMUST00000028755 3730 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Pdlim4P70271 Zyx-207ENSMUST00000203652 2605 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Pdlim4P70271 Aarsd1-201ENSMUST00000070395 1516 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Pdlim4P70271 Zfp879-202ENSMUST00000109133 2229 ntTSL 5 BASIC12.33□□□□□ -0.44
Pdlim4P70271 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Pdlim4P70271 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Pdlim4P70271 Gm15467-201ENSMUST00000120582 445 ntBASIC12.33□□□□□ -0.44
Pdlim4P70271 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC12.33□□□□□ -0.44
Pdlim4P70271 Gm16156-201ENSMUST00000141168 713 ntTSL 3 BASIC12.33□□□□□ -0.44
Pdlim4P70271 Dusp3-205ENSMUST00000143177 391 ntTSL 3 BASIC12.33□□□□□ -0.44
Pdlim4P70271 Zfp125-202ENSMUST00000144811 704 ntTSL 5 BASIC12.33□□□□□ -0.44
Pdlim4P70271 Lgals3-204ENSMUST00000150290 1298 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Pdlim4P70271 Erdr1-202ENSMUST00000177671 708 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Pdlim4P70271 Fau-202ENSMUST00000178310 571 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Pdlim4P70271 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Pdlim4P70271 AC174742.1-201ENSMUST00000218272 304 ntBASIC12.33□□□□□ -0.44
Pdlim4P70271 AC090659.1-201ENSMUST00000224334 768 ntBASIC12.33□□□□□ -0.44
Pdlim4P70271 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Pdlim4P70271 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Pdlim4P70271 Pmm1-202ENSMUST00000071462 1059 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Pdlim4P70271 1110038F14Rik-201ENSMUST00000071792 1010 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Pdlim4P70271 Ndufab1-203ENSMUST00000123296 1416 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Pdlim4P70271 Enoph1-201ENSMUST00000031268 1420 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Pdlim4P70271 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Pdlim4P70271 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC12.33□□□□□ -0.44
Pdlim4P70271 Agfg1-201ENSMUST00000063380 2896 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Pdlim4P70271 Mocos-201ENSMUST00000068006 2884 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Pdlim4P70271 P3h1-204ENSMUST00000121111 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Pdlim4P70271 Pars2-201ENSMUST00000058905 2191 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Pdlim4P70271 Ints3-203ENSMUST00000196530 3778 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Pdlim4P70271 Slc16a6-202ENSMUST00000070152 4219 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Pdlim4P70271 Ppip5k2-201ENSMUST00000042509 5882 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Pdlim4P70271 Phb2-201ENSMUST00000004375 1318 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Pdlim4P70271 Specc1-202ENSMUST00000092415 6797 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Pdlim4P70271 S100pbp-204ENSMUST00000106061 4426 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Pdlim4P70271 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Pdlim4P70271 Sirt4-202ENSMUST00000112067 1645 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Pdlim4P70271 Ranbp3-201ENSMUST00000002445 2511 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Pdlim4P70271 Lipo3-202ENSMUST00000112508 2839 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Pdlim4P70271 Dusp15-203ENSMUST00000123121 2993 ntAPPRIS P1 TSL 3 BASIC12.33□□□□□ -0.44
Pdlim4P70271 Syt17-204ENSMUST00000203796 2957 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Pdlim4P70271 Gk-201ENSMUST00000026039 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Pdlim4P70271 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Pdlim4P70271 Mief1-202ENSMUST00000166030 2712 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Pdlim4P70271 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Pdlim4P70271 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Pdlim4P70271 Abi2-201ENSMUST00000052332 5768 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Pdlim4P70271 Leng8-201ENSMUST00000037472 5105 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Pdlim4P70271 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 53.6 ms