Protein–RNA interactions for Protein: P62313

Lsm6, U6 snRNA-associated Sm-like protein LSm6, mousemouse

Known RBP Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm6P62313 AC154222.1-201ENSMUST00000223882 475 ntBASIC13□□□□□ -0.33
Lsm6P62313 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC13□□□□□ -0.33
Lsm6P62313 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Lsm6P62313 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC13□□□□□ -0.33
Lsm6P62313 Pum2-202ENSMUST00000111122 6311 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Lsm6P62313 Map3k9-202ENSMUST00000222322 3303 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Lsm6P62313 Plxnc1-201ENSMUST00000099337 7302 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Lsm6P62313 Chtop-205ENSMUST00000107343 3118 ntTSL 1 (best) BASIC13□□□□□ -0.33
Lsm6P62313 Gjd2-201ENSMUST00000090275 2879 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Lsm6P62313 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Lsm6P62313 Susd6-201ENSMUST00000068519 4977 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Lsm6P62313 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Lsm6P62313 Dgkq-201ENSMUST00000053913 4938 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Lsm6P62313 1700012B07Rik-202ENSMUST00000106674 2035 ntAPPRIS P4 TSL 1 (best) BASIC13□□□□□ -0.33
Lsm6P62313 Spns1-202ENSMUST00000119754 2001 ntTSL 5 BASIC13□□□□□ -0.33
Lsm6P62313 Tinf2-205ENSMUST00000227842 2001 ntAPPRIS ALT2 BASIC13□□□□□ -0.33
Lsm6P62313 Rnf123-201ENSMUST00000047746 4722 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Lsm6P62313 Gldn-201ENSMUST00000056740 4658 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Lsm6P62313 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Lsm6P62313 Lurap1l-201ENSMUST00000055922 3066 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Lsm6P62313 Acly-202ENSMUST00000107385 1741 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Lsm6P62313 4933421O10Rik-201ENSMUST00000155691 3847 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Lsm6P62313 Chac1-201ENSMUST00000028780 1637 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Lsm6P62313 Ubc-202ENSMUST00000136312 2618 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Lsm6P62313 Gm8096-201ENSMUST00000209921 1591 ntBASIC12.99□□□□□ -0.33
Lsm6P62313 Mtcl1-211ENSMUST00000177034 5441 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Lsm6P62313 Nup88-202ENSMUST00000108530 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Lsm6P62313 Runx2-202ENSMUST00000113571 5898 ntAPPRIS P3 TSL 5 BASIC12.99□□□□□ -0.33
Lsm6P62313 Tex13a-201ENSMUST00000096314 1317 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Lsm6P62313 Nfasc-208ENSMUST00000188307 3049 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Lsm6P62313 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC12.99□□□□□ -0.33
Lsm6P62313 Meig1-203ENSMUST00000115082 603 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Lsm6P62313 Mir7036b-201ENSMUST00000184791 63 ntBASIC12.99□□□□□ -0.33
Lsm6P62313 Bex3-201ENSMUST00000053540 930 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Lsm6P62313 Fam26f-201ENSMUST00000062784 1094 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Lsm6P62313 Rnf7-202ENSMUST00000071301 334 ntTSL 2 BASIC12.99□□□□□ -0.33
Lsm6P62313 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC12.99□□□□□ -0.33
Lsm6P62313 Hacd4-201ENSMUST00000030221 2089 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Lsm6P62313 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Lsm6P62313 Adam15-204ENSMUST00000107448 2893 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Lsm6P62313 Gm44291-201ENSMUST00000203102 2865 ntBASIC12.99□□□□□ -0.33
Lsm6P62313 Psmd13-201ENSMUST00000026560 1989 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Lsm6P62313 6030408B16Rik-202ENSMUST00000191426 1947 ntAPPRIS P5 TSL 1 (best) BASIC12.99□□□□□ -0.33
Lsm6P62313 Tgfbr2-202ENSMUST00000061101 8092 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Lsm6P62313 Emp2-201ENSMUST00000078357 3440 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Lsm6P62313 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Lsm6P62313 Oxtr-201ENSMUST00000053306 4704 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Lsm6P62313 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC12.99□□□□□ -0.33
Lsm6P62313 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Lsm6P62313 Acp6-201ENSMUST00000090759 1754 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Lsm6P62313 Mis12-201ENSMUST00000048807 3003 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Lsm6P62313 Dnmt3b-201ENSMUST00000056495 4318 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Lsm6P62313 Rlf-201ENSMUST00000056635 6242 ntAPPRIS P2 TSL 5 BASIC12.99□□□□□ -0.33
Lsm6P62313 Ceacam16-201ENSMUST00000014830 1635 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Lsm6P62313 Zfp639-205ENSMUST00000193287 2211 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Lsm6P62313 Wdr90-201ENSMUST00000079461 5991 ntAPPRIS P2 TSL 5 BASIC12.98□□□□□ -0.33
Lsm6P62313 Cep170b-211ENSMUST00000222711 6566 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Lsm6P62313 Anks1b-231ENSMUST00000183136 2786 ntTSL 5 BASIC12.98□□□□□ -0.33
Lsm6P62313 BC005537-201ENSMUST00000019276 5849 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Lsm6P62313 Map6d1-201ENSMUST00000040880 3273 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Lsm6P62313 Iqck-202ENSMUST00000106547 2026 ntAPPRIS P2 TSL 5 BASIC12.98□□□□□ -0.33
Lsm6P62313 Ppp2r1a-201ENSMUST00000007708 2410 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Lsm6P62313 Chaf1b-202ENSMUST00000117099 1894 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Lsm6P62313 Clstn1-202ENSMUST00000105691 4459 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Lsm6P62313 Sacs-201ENSMUST00000089394 3345 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Lsm6P62313 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC12.98□□□□□ -0.33
Lsm6P62313 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Lsm6P62313 Gm14140-201ENSMUST00000119999 995 ntBASIC12.98□□□□□ -0.33
Lsm6P62313 Gm12134-201ENSMUST00000122109 520 ntBASIC12.98□□□□□ -0.33
Lsm6P62313 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC12.98□□□□□ -0.33
Lsm6P62313 Sssca1-203ENSMUST00000159693 705 ntTSL 3 BASIC12.98□□□□□ -0.33
Lsm6P62313 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC12.98□□□□□ -0.33
Lsm6P62313 Mrpl34-201ENSMUST00000048914 607 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Lsm6P62313 Commd5-201ENSMUST00000068407 1037 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Lsm6P62313 Taz-202ENSMUST00000114180 1786 ntAPPRIS ALT1 TSL 5 BASIC12.98□□□□□ -0.33
Lsm6P62313 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Lsm6P62313 Zfp184-202ENSMUST00000102978 3198 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Lsm6P62313 Grk5-201ENSMUST00000003313 3165 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Lsm6P62313 Grb2-203ENSMUST00000106497 2683 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Lsm6P62313 Tgfa-201ENSMUST00000032066 4527 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Lsm6P62313 Fbxo46-202ENSMUST00000165913 2498 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Lsm6P62313 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Lsm6P62313 Uck2-202ENSMUST00000053686 4731 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Lsm6P62313 Frmd5-207ENSMUST00000138157 4230 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Lsm6P62313 Asprv1-201ENSMUST00000043400 1547 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
Lsm6P62313 Lrriq4-202ENSMUST00000108267 2387 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Lsm6P62313 Psmd5-201ENSMUST00000028225 4397 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Lsm6P62313 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Lsm6P62313 Rfx5-207ENSMUST00000137088 4333 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Lsm6P62313 Upk1a-201ENSMUST00000006476 1421 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Lsm6P62313 Chtop-206ENSMUST00000107344 2972 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Lsm6P62313 Zfp36l1-201ENSMUST00000021552 2990 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Lsm6P62313 Syne4-201ENSMUST00000054594 1355 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Lsm6P62313 Wdr31-203ENSMUST00000120095 2549 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Lsm6P62313 Mccc2-201ENSMUST00000022148 2123 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Lsm6P62313 Otud6b-201ENSMUST00000117268 3266 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Lsm6P62313 Fdx1-202ENSMUST00000214013 2759 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Lsm6P62313 Adck5-214ENSMUST00000162503 2040 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Lsm6P62313 Cnnm2-201ENSMUST00000077666 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Lsm6P62313 Cbx6-201ENSMUST00000109623 996 ntTSL 5 BASIC12.97□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 28.3 ms