Protein–RNA interactions for Protein: P54823

Ddx6, Probable ATP-dependent RNA helicase DDX6, mousemouse

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx6P54823 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Ddx6P54823 Gm8334-201ENSMUST00000112755 1662 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
Ddx6P54823 Olfr160-203ENSMUST00000215727 1667 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
Ddx6P54823 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
Ddx6P54823 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC15.03■□□□□ -0
Ddx6P54823 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
Ddx6P54823 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
Ddx6P54823 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Ddx6P54823 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Ddx6P54823 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Ddx6P54823 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
Ddx6P54823 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC15.02■□□□□ -0
Ddx6P54823 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Ddx6P54823 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
Ddx6P54823 Gm15939-201ENSMUST00000160756 2147 ntTSL 5 BASIC15.02■□□□□ -0
Ddx6P54823 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
Ddx6P54823 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC15.02■□□□□ -0
Ddx6P54823 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
Ddx6P54823 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC15.02■□□□□ -0
Ddx6P54823 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC15.02■□□□□ -0
Ddx6P54823 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Ddx6P54823 Rps7-ps2-201ENSMUST00000219719 1347 ntBASIC15.02■□□□□ -0
Ddx6P54823 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Ddx6P54823 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Ddx6P54823 Dancr-202ENSMUST00000120364 575 ntTSL 1 (best) BASIC15.02■□□□□ -0
Ddx6P54823 Gm14719-201ENSMUST00000121891 340 ntBASIC15.02■□□□□ -0
Ddx6P54823 Mecp2-204ENSMUST00000140399 1168 ntTSL 5 BASIC15.02■□□□□ -0
Ddx6P54823 Gm9726-201ENSMUST00000180321 678 ntBASIC15.02■□□□□ -0
Ddx6P54823 Tpi-rs2-201ENSMUST00000182471 756 ntBASIC15.02■□□□□ -0
Ddx6P54823 AI463170-203ENSMUST00000219353 430 ntTSL 1 (best) BASIC15.02■□□□□ -0
Ddx6P54823 Erp29-201ENSMUST00000052590 1123 ntTSL 1 (best) BASIC15.02■□□□□ -0
Ddx6P54823 H2bfm-201ENSMUST00000059808 1052 ntAPPRIS P1 BASIC15.02■□□□□ -0
Ddx6P54823 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Ddx6P54823 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC15.02□□□□□ -0.01
Ddx6P54823 Arf2-201ENSMUST00000057921 2242 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Ddx6P54823 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Ddx6P54823 Cux2-201ENSMUST00000086317 5113 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Ddx6P54823 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Ddx6P54823 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Ddx6P54823 Gatsl3-201ENSMUST00000020699 1574 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Ddx6P54823 Gpx3-201ENSMUST00000082430 1594 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Ddx6P54823 Bcat2-202ENSMUST00000120864 1536 ntTSL 5 BASIC15.02□□□□□ -0.01
Ddx6P54823 Krt42-201ENSMUST00000017270 1542 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Ddx6P54823 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Ddx6P54823 Ebag9-202ENSMUST00000226165 1931 ntAPPRIS P1 BASIC15.02□□□□□ -0.01
Ddx6P54823 Otud4-202ENSMUST00000173078 7354 ntAPPRIS P4 TSL 1 (best) BASIC15.01□□□□□ -0.01
Ddx6P54823 Efhd1-201ENSMUST00000027472 1854 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Ddx6P54823 Klf15-204ENSMUST00000203607 2240 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Ddx6P54823 Plk1-201ENSMUST00000033154 2199 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Ddx6P54823 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Ddx6P54823 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Ddx6P54823 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC15.01□□□□□ -0.01
Ddx6P54823 Zfp865-201ENSMUST00000076251 7503 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Ddx6P54823 B9d1-201ENSMUST00000102657 817 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Ddx6P54823 1700028E10Rik-205ENSMUST00000202024 924 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Ddx6P54823 Gm36236-201ENSMUST00000220780 701 ntTSL 3 BASIC15.01□□□□□ -0.01
Ddx6P54823 Shd-206ENSMUST00000225145 998 ntBASIC15.01□□□□□ -0.01
Ddx6P54823 AC132863.2-201ENSMUST00000226643 799 ntBASIC15.01□□□□□ -0.01
Ddx6P54823 Zswim7-201ENSMUST00000072916 732 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Ddx6P54823 Dnajc1-209ENSMUST00000166495 5497 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Ddx6P54823 Agbl5-202ENSMUST00000114700 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Ddx6P54823 Slc35c2-201ENSMUST00000017808 1843 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Ddx6P54823 Ghdc-201ENSMUST00000017891 2462 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Ddx6P54823 Igdcc4-202ENSMUST00000077696 6361 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
Ddx6P54823 Nt5c3b-205ENSMUST00000107399 1427 ntTSL 1 (best) BASIC15□□□□□ -0.01
Ddx6P54823 Ydjc-202ENSMUST00000115702 1713 ntTSL 5 BASIC15□□□□□ -0.01
Ddx6P54823 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC15□□□□□ -0.01
Ddx6P54823 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
Ddx6P54823 Tfap2a-203ENSMUST00000223869 2037 ntBASIC15□□□□□ -0.01
Ddx6P54823 Dmkn-204ENSMUST00000085691 2007 ntAPPRIS P4 TSL 1 (best) BASIC15□□□□□ -0.01
Ddx6P54823 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Ddx6P54823 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Ddx6P54823 Hip1r-201ENSMUST00000000939 6735 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Ddx6P54823 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Ddx6P54823 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC15□□□□□ -0.01
Ddx6P54823 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC15□□□□□ -0.01
Ddx6P54823 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Ddx6P54823 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Ddx6P54823 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Ddx6P54823 Pld2-202ENSMUST00000108556 3391 ntTSL 1 (best) BASIC15□□□□□ -0.01
Ddx6P54823 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Ddx6P54823 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Ddx6P54823 D11Bhm181e-201ENSMUST00000122252 282 ntBASIC15□□□□□ -0.01
Ddx6P54823 Tmem61-202ENSMUST00000177702 561 ntTSL 5 BASIC15□□□□□ -0.01
Ddx6P54823 Kansl3-206ENSMUST00000187628 336 ntTSL 5 BASIC15□□□□□ -0.01
Ddx6P54823 Bet1l-209ENSMUST00000211624 769 ntTSL 3 BASIC15□□□□□ -0.01
Ddx6P54823 Gm7730-201ENSMUST00000212486 454 ntBASIC15□□□□□ -0.01
Ddx6P54823 Abl1-201ENSMUST00000028190 5794 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
Ddx6P54823 Adnp-201ENSMUST00000057793 4917 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
Ddx6P54823 Tmem204-201ENSMUST00000024984 1846 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Ddx6P54823 Gm5320-201ENSMUST00000207163 1519 ntBASIC15□□□□□ -0.01
Ddx6P54823 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
Ddx6P54823 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
Ddx6P54823 Pcdha3-201ENSMUST00000192503 5332 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Ddx6P54823 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC15□□□□□ -0.01
Ddx6P54823 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Ddx6P54823 Plcb1-205ENSMUST00000131552 7202 ntTSL 1 (best) BASIC15□□□□□ -0.01
Ddx6P54823 Agap1-202ENSMUST00000074945 10069 ntTSL 5 BASIC15□□□□□ -0.01
Ddx6P54823 Gm13613-201ENSMUST00000126240 1444 ntTSL 1 (best) BASIC15□□□□□ -0.01
Ddx6P54823 Fahd1-201ENSMUST00000049642 1407 ntAPPRIS P1 BASIC15□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 35.7 ms