Protein–RNA interactions for Protein: P51954

Nek1, Serine/threonine-protein kinase Nek1, mousemouse

Predictions only

Length 1,203 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nek1P51954 Cort-201ENSMUST00000030815 677 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Nek1P51954 Wdr46-201ENSMUST00000025170 2227 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Nek1P51954 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Nek1P51954 Brix1-201ENSMUST00000022855 2664 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Nek1P51954 Dennd1a-201ENSMUST00000102787 4342 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Nek1P51954 Nupl1-207ENSMUST00000225311 2475 ntBASIC16.55■□□□□ 0.24
Nek1P51954 Adgrb2-201ENSMUST00000030571 4734 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
Nek1P51954 Tmem88-201ENSMUST00000050140 1582 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Nek1P51954 Acot6-201ENSMUST00000056822 3388 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Nek1P51954 Sf1-204ENSMUST00000113489 2863 ntTSL 5 BASIC16.55■□□□□ 0.24
Nek1P51954 Nrxn1-209ENSMUST00000161402 4953 ntTSL 5 BASIC16.55■□□□□ 0.24
Nek1P51954 Msl2-201ENSMUST00000085177 4889 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Nek1P51954 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
Nek1P51954 Psmd5-201ENSMUST00000028225 4397 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Nek1P51954 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
Nek1P51954 Klrg1-201ENSMUST00000032207 1414 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Nek1P51954 Nr3c2-204ENSMUST00000109913 5916 ntAPPRIS P2 TSL 5 BASIC16.54■□□□□ 0.24
Nek1P51954 Gpt2-201ENSMUST00000034136 3639 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Nek1P51954 Iqce-202ENSMUST00000077890 2494 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Nek1P51954 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Nek1P51954 Gm12008-201ENSMUST00000117791 755 ntBASIC16.54■□□□□ 0.24
Nek1P51954 Wdr61-203ENSMUST00000121204 1290 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Nek1P51954 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Nek1P51954 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC16.54■□□□□ 0.24
Nek1P51954 1110038F14Rik-201ENSMUST00000071792 1010 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Nek1P51954 Apol7d-201ENSMUST00000097699 826 ntTSL 2 BASIC16.54■□□□□ 0.24
Nek1P51954 Lurap1l-201ENSMUST00000055922 3066 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Nek1P51954 Rassf5-203ENSMUST00000112442 3388 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Nek1P51954 Ccdc158-203ENSMUST00000150359 3353 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Nek1P51954 Zfp868-202ENSMUST00000121886 2259 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Nek1P51954 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Nek1P51954 Aggf1-201ENSMUST00000022189 3249 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Nek1P51954 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Nek1P51954 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
Nek1P51954 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Nek1P51954 AC122901.1-201ENSMUST00000214203 1790 ntBASIC16.54■□□□□ 0.24
Nek1P51954 Dsg2-201ENSMUST00000059787 5766 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Nek1P51954 Tubgcp4-215ENSMUST00000186659 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Nek1P51954 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
Nek1P51954 Fam76b-201ENSMUST00000059579 3702 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Nek1P51954 Vps53-201ENSMUST00000056601 2833 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Nek1P51954 Ceacam16-201ENSMUST00000014830 1635 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Nek1P51954 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Nek1P51954 Foxl1-201ENSMUST00000181609 2705 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
Nek1P51954 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
Nek1P51954 Fam189b-203ENSMUST00000119707 2415 ntTSL 5 BASIC16.53■□□□□ 0.24
Nek1P51954 Thap7-201ENSMUST00000100125 1248 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Nek1P51954 Rhox2h-201ENSMUST00000115162 779 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Nek1P51954 Hps1-204ENSMUST00000160455 2952 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Nek1P51954 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC16.53■□□□□ 0.24
Nek1P51954 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC16.53■□□□□ 0.24
Nek1P51954 1500035N22Rik-201ENSMUST00000075081 865 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Nek1P51954 Gm996-203ENSMUST00000188161 2925 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
Nek1P51954 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Nek1P51954 Comt-202ENSMUST00000115609 1786 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Nek1P51954 Evpl-201ENSMUST00000037007 6384 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
Nek1P51954 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Nek1P51954 Chodl-201ENSMUST00000023568 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Nek1P51954 Pank4-201ENSMUST00000030931 2508 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Nek1P51954 Unc93b1-204ENSMUST00000165711 1991 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
Nek1P51954 Zfp639-205ENSMUST00000193287 2211 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Nek1P51954 Gatad2a-203ENSMUST00000177851 5007 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
Nek1P51954 Sgpl1-202ENSMUST00000122259 4102 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Nek1P51954 AC131586.3-201ENSMUST00000228355 1367 ntBASIC16.52■□□□□ 0.24
Nek1P51954 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Nek1P51954 Mdga1-208ENSMUST00000171691 8339 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
Nek1P51954 Gm3928-201ENSMUST00000121141 1307 ntBASIC16.52■□□□□ 0.24
Nek1P51954 Tmem184a-201ENSMUST00000044002 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Nek1P51954 Bag4-201ENSMUST00000038498 4876 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Nek1P51954 Emp2-201ENSMUST00000078357 3440 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Nek1P51954 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Nek1P51954 Car7-201ENSMUST00000056051 1538 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Nek1P51954 Klk6-202ENSMUST00000107967 1172 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Nek1P51954 Gm5253-201ENSMUST00000187104 1025 ntBASIC16.52■□□□□ 0.24
Nek1P51954 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC16.52■□□□□ 0.24
Nek1P51954 Vsig2-206ENSMUST00000215957 851 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Nek1P51954 AC147366.1-201ENSMUST00000227671 852 ntBASIC16.52■□□□□ 0.24
Nek1P51954 Tsfm-201ENSMUST00000040560 1206 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Nek1P51954 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Nek1P51954 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
Nek1P51954 Syn1-202ENSMUST00000115345 3261 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
Nek1P51954 Otud6b-201ENSMUST00000117268 3266 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Nek1P51954 Pak2-201ENSMUST00000023467 5741 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Nek1P51954 Col16a1-201ENSMUST00000044565 5206 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Nek1P51954 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.23
Nek1P51954 Rxrb-202ENSMUST00000116612 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
Nek1P51954 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
Nek1P51954 Nupr1l-201ENSMUST00000178355 1827 ntAPPRIS P1 BASIC16.52■□□□□ 0.23
Nek1P51954 Glyr1-202ENSMUST00000115844 3348 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Nek1P51954 Glyr1-201ENSMUST00000023189 3330 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
Nek1P51954 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Nek1P51954 Gm43205-201ENSMUST00000198622 1968 ntBASIC16.51■□□□□ 0.23
Nek1P51954 Zfp57-202ENSMUST00000089968 1991 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Nek1P51954 Clec2h-201ENSMUST00000032518 2160 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Nek1P51954 Lrriq4-202ENSMUST00000108267 2387 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
Nek1P51954 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Nek1P51954 AC167013.2-201ENSMUST00000228520 2684 ntBASIC16.51■□□□□ 0.23
Nek1P51954 Klf15-203ENSMUST00000203039 2482 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
Nek1P51954 Ncbp2-201ENSMUST00000023460 2070 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Nek1P51954 Agps-201ENSMUST00000047232 7359 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 22.5 ms