Protein–RNA interactions for Protein: P49698

Hnf4a, Hepatocyte nuclear factor 4-alpha, mousemouse

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hnf4aP49698 Egfl8-201ENSMUST00000015611 1150 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Hnf4aP49698 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Hnf4aP49698 Egfl7-216ENSMUST00000174211 1163 ntAPPRIS P4 TSL 1 (best) BASIC14.37□□□□□ -0.11
Hnf4aP49698 Gm27628-201ENSMUST00000184911 107 ntBASIC14.37□□□□□ -0.11
Hnf4aP49698 1110035H17Rik-202ENSMUST00000205672 1231 ntBASIC14.37□□□□□ -0.11
Hnf4aP49698 Papd7-204ENSMUST00000223344 2118 ntAPPRIS P2 TSL 3 BASIC14.37□□□□□ -0.11
Hnf4aP49698 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Hnf4aP49698 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Hnf4aP49698 Egfl8-202ENSMUST00000097345 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Hnf4aP49698 Tsc22d1-202ENSMUST00000048371 4818 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Hnf4aP49698 Gm21981-201ENSMUST00000143789 2721 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Hnf4aP49698 Synj1-203ENSMUST00000121759 7090 ntAPPRIS P4 TSL 5 BASIC14.37□□□□□ -0.11
Hnf4aP49698 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Hnf4aP49698 Map6-204ENSMUST00000127492 4920 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Hnf4aP49698 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Hnf4aP49698 Trim24-203ENSMUST00000120428 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Hnf4aP49698 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Hnf4aP49698 Ralgapb-201ENSMUST00000046274 8366 ntAPPRIS ALT1 TSL 5 BASIC14.37□□□□□ -0.11
Hnf4aP49698 Gm37728-201ENSMUST00000195025 2292 ntBASIC14.36□□□□□ -0.11
Hnf4aP49698 Kif12-201ENSMUST00000030042 2250 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Hnf4aP49698 Cdhr5-201ENSMUST00000080654 2133 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Hnf4aP49698 Eif4ebp2-201ENSMUST00000020288 5784 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Hnf4aP49698 Hpcal1-201ENSMUST00000071858 1526 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Hnf4aP49698 Ccnj-201ENSMUST00000025983 3819 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Hnf4aP49698 Fbxw7-204ENSMUST00000107679 4473 ntAPPRIS ALT1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Hnf4aP49698 Tbl1xr1-203ENSMUST00000193734 8237 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Hnf4aP49698 Kcnk6-201ENSMUST00000085818 4084 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Hnf4aP49698 Wnt11-201ENSMUST00000067495 3451 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Hnf4aP49698 Rgs14-201ENSMUST00000063771 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Hnf4aP49698 Apc-202ENSMUST00000079362 8867 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Hnf4aP49698 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Hnf4aP49698 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Hnf4aP49698 Gm11750-201ENSMUST00000146016 583 ntTSL 5 BASIC14.36□□□□□ -0.11
Hnf4aP49698 1700039E22Rik-201ENSMUST00000174082 770 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Hnf4aP49698 Gm30097-202ENSMUST00000194580 329 ntTSL 3 BASIC14.36□□□□□ -0.11
Hnf4aP49698 Gm2651-201ENSMUST00000203560 838 ntBASIC14.36□□□□□ -0.11
Hnf4aP49698 Timm8a2-201ENSMUST00000045976 913 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Hnf4aP49698 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Hnf4aP49698 6030408B16Rik-201ENSMUST00000071328 1155 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Hnf4aP49698 Hist1h4j-201ENSMUST00000087714 774 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
Hnf4aP49698 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Hnf4aP49698 Apaf1-201ENSMUST00000020157 6577 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Hnf4aP49698 Pafah1b1-202ENSMUST00000102520 5789 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Hnf4aP49698 Ptprs-202ENSMUST00000086828 5608 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Hnf4aP49698 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Hnf4aP49698 Reck-201ENSMUST00000030198 4433 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Hnf4aP49698 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Hnf4aP49698 Gm11873-201ENSMUST00000117877 1304 ntBASIC14.36□□□□□ -0.11
Hnf4aP49698 Pard6b-201ENSMUST00000052125 3399 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Hnf4aP49698 Hsph1-209ENSMUST00000202089 3054 ntTSL 5 BASIC14.35□□□□□ -0.11
Hnf4aP49698 Slc35e2-201ENSMUST00000043829 2910 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hnf4aP49698 Grin3a-201ENSMUST00000076674 7431 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hnf4aP49698 4930438A08Rik-201ENSMUST00000108834 2093 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Hnf4aP49698 Gm8237-201ENSMUST00000164484 2051 ntAPPRIS P5 TSL 5 BASIC14.35□□□□□ -0.11
Hnf4aP49698 Edem3-204ENSMUST00000191070 3127 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Hnf4aP49698 Usp33-201ENSMUST00000026507 4153 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hnf4aP49698 Gm38042-201ENSMUST00000191614 5208 ntBASIC14.35□□□□□ -0.11
Hnf4aP49698 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hnf4aP49698 Gm37736-201ENSMUST00000193564 2802 ntBASIC14.35□□□□□ -0.11
Hnf4aP49698 Taz-202ENSMUST00000114180 1786 ntAPPRIS ALT1 TSL 5 BASIC14.35□□□□□ -0.11
Hnf4aP49698 Dnajc6-202ENSMUST00000094953 5322 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hnf4aP49698 Bag6-202ENSMUST00000166426 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hnf4aP49698 Gm12350-201ENSMUST00000121208 462 ntBASIC14.35□□□□□ -0.11
Hnf4aP49698 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Hnf4aP49698 AC138767.1-201ENSMUST00000222661 415 ntBASIC14.35□□□□□ -0.11
Hnf4aP49698 Gm10044-203ENSMUST00000166813 1471 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Hnf4aP49698 Pcdh10-204ENSMUST00000193252 4638 ntAPPRIS ALT2 BASIC14.35□□□□□ -0.11
Hnf4aP49698 Rnf11-201ENSMUST00000030284 4061 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hnf4aP49698 Gm5096-201ENSMUST00000091776 1858 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Hnf4aP49698 Wwc2-201ENSMUST00000057561 8678 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hnf4aP49698 Cndp2-202ENSMUST00000168419 2088 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hnf4aP49698 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hnf4aP49698 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hnf4aP49698 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Hnf4aP49698 Zfp868-202ENSMUST00000121886 2259 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hnf4aP49698 Gpt2-201ENSMUST00000034136 3639 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hnf4aP49698 Epb41l1-205ENSMUST00000109574 5904 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Hnf4aP49698 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hnf4aP49698 Tmod2-208ENSMUST00000215614 1921 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hnf4aP49698 Islr2-210ENSMUST00000215950 4109 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hnf4aP49698 AC025913.2-201ENSMUST00000220136 1766 ntBASIC14.34□□□□□ -0.11
Hnf4aP49698 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hnf4aP49698 Slc24a3-201ENSMUST00000081121 1788 ntAPPRIS P2 TSL 5 BASIC14.34□□□□□ -0.11
Hnf4aP49698 Cryzl1-201ENSMUST00000073466 1965 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Hnf4aP49698 Snx11-201ENSMUST00000021246 2551 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hnf4aP49698 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hnf4aP49698 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Hnf4aP49698 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hnf4aP49698 Gm10676-201ENSMUST00000098778 3221 ntBASIC14.34□□□□□ -0.11
Hnf4aP49698 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hnf4aP49698 Nat8f7-201ENSMUST00000160534 1822 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Hnf4aP49698 Zbtb46-201ENSMUST00000029106 5309 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Hnf4aP49698 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hnf4aP49698 Epha2-201ENSMUST00000006614 3913 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hnf4aP49698 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Hnf4aP49698 AC154527.4-201ENSMUST00000224364 1667 ntBASIC14.34□□□□□ -0.11
Hnf4aP49698 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Hnf4aP49698 Erdr1-202ENSMUST00000177671 708 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Hnf4aP49698 Rps2-ps5-201ENSMUST00000184266 849 ntBASIC14.34□□□□□ -0.11
Hnf4aP49698 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC14.34□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 50.4 ms