Protein–RNA interactions for Protein: P49135

Ercc3, General transcription and DNA repair factor IIH helicase subunit XPB, mousemouse

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ercc3P49135 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ercc3P49135 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ercc3P49135 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ercc3P49135 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Ercc3P49135 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ercc3P49135 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ercc3P49135 Msl2-201ENSMUST00000085177 4889 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ercc3P49135 Coro6-201ENSMUST00000021190 1418 ntAPPRIS P5 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ercc3P49135 Commd6-201ENSMUST00000100339 1090 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ercc3P49135 Gm23935-201ENSMUST00000102303 57 ntBASIC17.59■□□□□ 0.41
Ercc3P49135 Gm24270-201ENSMUST00000102326 57 ntBASIC17.59■□□□□ 0.41
Ercc3P49135 Ifna12-201ENSMUST00000102806 797 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
Ercc3P49135 Gm24245-201ENSMUST00000157318 57 ntBASIC17.59■□□□□ 0.41
Ercc3P49135 Gm44662-201ENSMUST00000206970 412 ntTSL 5 BASIC17.59■□□□□ 0.41
Ercc3P49135 Gapdh-201ENSMUST00000073605 1272 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ercc3P49135 Olfr520-201ENSMUST00000098264 951 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
Ercc3P49135 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ercc3P49135 Fam8a1-201ENSMUST00000099547 3664 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ercc3P49135 Grid2-201ENSMUST00000095852 5860 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ercc3P49135 Klhl12-202ENSMUST00000112232 3220 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Ercc3P49135 Tle3-218ENSMUST00000178113 5205 ntTSL 5 BASIC17.59■□□□□ 0.41
Ercc3P49135 2510009E07Rik-201ENSMUST00000053336 5164 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ercc3P49135 Fam109b-201ENSMUST00000050349 2745 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ercc3P49135 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
Ercc3P49135 Rfx5-207ENSMUST00000137088 4333 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
Ercc3P49135 Tle3-205ENSMUST00000159630 4065 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Ercc3P49135 Tmem38a-201ENSMUST00000034244 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ercc3P49135 Slc39a14-201ENSMUST00000022688 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ercc3P49135 Tcf21-202ENSMUST00000218002 1788 ntBASIC17.58■□□□□ 0.41
Ercc3P49135 Slfnl1-201ENSMUST00000062990 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Ercc3P49135 Gm9768-201ENSMUST00000206007 2861 ntBASIC17.58■□□□□ 0.41
Ercc3P49135 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Ercc3P49135 Baz1b-201ENSMUST00000002825 6492 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Ercc3P49135 Cbfb-203ENSMUST00000109394 2487 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
Ercc3P49135 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.41
Ercc3P49135 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Ercc3P49135 Gm13410-201ENSMUST00000117058 1415 ntBASIC17.58■□□□□ 0.41
Ercc3P49135 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Ercc3P49135 Map3k12-207ENSMUST00000169377 4210 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Ercc3P49135 Aggf1-201ENSMUST00000022189 3249 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Ercc3P49135 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Ercc3P49135 Hist1h4n-201ENSMUST00000102979 430 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
Ercc3P49135 Hist1h4m-201ENSMUST00000104941 402 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
Ercc3P49135 Znhit1-204ENSMUST00000111091 1070 ntTSL 5 BASIC17.58■□□□□ 0.4
Ercc3P49135 Il15ra-206ENSMUST00000114834 784 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Ercc3P49135 Qdpr-204ENSMUST00000120867 1234 ntTSL 5 BASIC17.58■□□□□ 0.4
Ercc3P49135 Gm11745-201ENSMUST00000121669 448 ntBASIC17.58■□□□□ 0.4
Ercc3P49135 Gm21984-201ENSMUST00000123117 822 ntTSL 5 BASIC17.58■□□□□ 0.4
Ercc3P49135 Gm29202-201ENSMUST00000191263 422 ntTSL 5 BASIC17.58■□□□□ 0.4
Ercc3P49135 AC131187.1-201ENSMUST00000224567 809 ntBASIC17.58■□□□□ 0.4
Ercc3P49135 St3gal3-202ENSMUST00000097912 2143 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Ercc3P49135 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC17.58■□□□□ 0.4
Ercc3P49135 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Ercc3P49135 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Ercc3P49135 Lix1l-201ENSMUST00000062058 3312 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Ercc3P49135 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Ercc3P49135 Gm26578-201ENSMUST00000181702 4611 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Ercc3P49135 Uros-203ENSMUST00000106145 1644 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Ercc3P49135 Vsig10-202ENSMUST00000111967 4236 ntAPPRIS P2 TSL 5 BASIC17.58■□□□□ 0.4
Ercc3P49135 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ercc3P49135 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Ercc3P49135 Orai3-203ENSMUST00000121504 2141 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Ercc3P49135 AI849053-201ENSMUST00000181021 2658 ntTSL 3 BASIC17.57■□□□□ 0.4
Ercc3P49135 Gm44443-201ENSMUST00000204396 5633 ntBASIC17.57■□□□□ 0.4
Ercc3P49135 Cox16-201ENSMUST00000002757 2007 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ercc3P49135 Pex5-201ENSMUST00000035861 3139 ntAPPRIS P4 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ercc3P49135 Gm42632-201ENSMUST00000201707 2411 ntBASIC17.57■□□□□ 0.4
Ercc3P49135 Ccdc154-201ENSMUST00000073277 2417 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
Ercc3P49135 Hip1r-201ENSMUST00000000939 6735 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ercc3P49135 Tex13a-201ENSMUST00000096314 1317 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ercc3P49135 Tmx4-201ENSMUST00000038228 5488 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ercc3P49135 Commd5-202ENSMUST00000109793 920 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
Ercc3P49135 Tmsb4x-202ENSMUST00000112175 864 ntTSL 2 BASIC17.57■□□□□ 0.4
Ercc3P49135 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC17.57■□□□□ 0.4
Ercc3P49135 Rps13-ps5-201ENSMUST00000117939 456 ntBASIC17.57■□□□□ 0.4
Ercc3P49135 Gm15483-201ENSMUST00000120338 456 ntBASIC17.57■□□□□ 0.4
Ercc3P49135 Ercc8-202ENSMUST00000120672 1144 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Ercc3P49135 Rabep1-208ENSMUST00000179114 1264 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Ercc3P49135 Arfgap1-213ENSMUST00000184394 1209 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
Ercc3P49135 Thap4-205ENSMUST00000189728 713 ntTSL 2 BASIC17.57■□□□□ 0.4
Ercc3P49135 Gm8597-201ENSMUST00000191525 1109 ntBASIC17.57■□□□□ 0.4
Ercc3P49135 Ybx1-ps2-201ENSMUST00000201305 957 ntBASIC17.57■□□□□ 0.4
Ercc3P49135 Gm30437-201ENSMUST00000206086 1201 ntBASIC17.57■□□□□ 0.4
Ercc3P49135 AC124549.3-201ENSMUST00000225541 367 ntBASIC17.57■□□□□ 0.4
Ercc3P49135 C1qtnf2-201ENSMUST00000057679 1211 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ercc3P49135 Krt14-201ENSMUST00000007272 1698 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ercc3P49135 Gm20482-201ENSMUST00000172746 1644 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Ercc3P49135 Eif2b2-201ENSMUST00000004910 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ercc3P49135 Wnt11-201ENSMUST00000067495 3451 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
Ercc3P49135 Cdcp1-201ENSMUST00000039229 5310 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ercc3P49135 Usp53-201ENSMUST00000090379 6185 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ercc3P49135 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC17.57■□□□□ 0.4
Ercc3P49135 Hnrnpul1-205ENSMUST00000206832 3784 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ercc3P49135 Btaf1-201ENSMUST00000099494 7204 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ercc3P49135 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC17.57■□□□□ 0.4
Ercc3P49135 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ercc3P49135 Nsun7-203ENSMUST00000201100 2775 ntAPPRIS P3 TSL 5 BASIC17.57■□□□□ 0.4
Ercc3P49135 Cyb561a3-201ENSMUST00000168445 1474 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Ercc3P49135 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ercc3P49135 Ccdc42-203ENSMUST00000154294 1384 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 39.8 ms