Protein–RNA interactions for Protein: P40645

Sox6, Transcription factor SOX-6, mousemouse

Predictions only

Length 827 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox6P40645 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Sox6P40645 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Sox6P40645 Vash1-201ENSMUST00000021681 2599 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Sox6P40645 Zfp839-201ENSMUST00000170060 3723 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Sox6P40645 Fbn1-201ENSMUST00000028633 9847 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Sox6P40645 Ccnj-201ENSMUST00000025983 3819 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Sox6P40645 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Sox6P40645 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
Sox6P40645 Lpcat2-201ENSMUST00000046290 2811 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Sox6P40645 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC13.95□□□□□ -0.18
Sox6P40645 Fgd6-201ENSMUST00000020208 8044 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Sox6P40645 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Sox6P40645 Srsf10-202ENSMUST00000097844 3055 ntAPPRIS ALT1 TSL 2 BASIC13.94□□□□□ -0.18
Sox6P40645 Chtf18-201ENSMUST00000048054 3214 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Sox6P40645 Etv6-202ENSMUST00000111963 5707 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Sox6P40645 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
Sox6P40645 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
Sox6P40645 Chml-201ENSMUST00000104984 6905 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
Sox6P40645 Chml-202ENSMUST00000209720 6905 ntTSL 5 BASIC13.94□□□□□ -0.18
Sox6P40645 Wbscr25-202ENSMUST00000148729 2075 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Sox6P40645 Gm37297-201ENSMUST00000192974 2384 ntBASIC13.94□□□□□ -0.18
Sox6P40645 Tmem110-201ENSMUST00000006701 3742 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Sox6P40645 Ltbp4-201ENSMUST00000038618 5386 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
Sox6P40645 Hectd1-201ENSMUST00000042052 8988 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
Sox6P40645 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC13.94□□□□□ -0.18
Sox6P40645 Kmt5c-202ENSMUST00000108582 2774 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Sox6P40645 Gm13884-201ENSMUST00000118103 829 ntBASIC13.94□□□□□ -0.18
Sox6P40645 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC13.94□□□□□ -0.18
Sox6P40645 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Sox6P40645 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC13.94□□□□□ -0.18
Sox6P40645 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Sox6P40645 Orai3-203ENSMUST00000121504 2141 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Sox6P40645 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Sox6P40645 Arhgef33-202ENSMUST00000223878 3253 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
Sox6P40645 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Sox6P40645 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
Sox6P40645 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC13.93□□□□□ -0.18
Sox6P40645 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Sox6P40645 Fgd1-201ENSMUST00000026296 4001 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Sox6P40645 Gm16796-201ENSMUST00000126086 3172 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Sox6P40645 Riox2-201ENSMUST00000023407 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Sox6P40645 Il1r1-202ENSMUST00000114795 4832 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Sox6P40645 Pip5k1c-210ENSMUST00000163075 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Sox6P40645 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC13.93□□□□□ -0.18
Sox6P40645 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC13.93□□□□□ -0.18
Sox6P40645 Naa30-201ENSMUST00000037362 4464 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
Sox6P40645 Plod2-201ENSMUST00000070522 3649 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
Sox6P40645 Pigg-203ENSMUST00000119014 4573 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
Sox6P40645 Cc2d1b-201ENSMUST00000030320 3303 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Sox6P40645 Nop53-201ENSMUST00000044158 3176 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Sox6P40645 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Sox6P40645 Gm25990-201ENSMUST00000102440 86 ntBASIC13.93□□□□□ -0.18
Sox6P40645 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC13.93□□□□□ -0.18
Sox6P40645 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC13.93□□□□□ -0.18
Sox6P40645 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
Sox6P40645 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC13.93□□□□□ -0.18
Sox6P40645 Tac4-201ENSMUST00000021242 1251 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Sox6P40645 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC13.93□□□□□ -0.18
Sox6P40645 AC164629.2-201ENSMUST00000217916 270 ntBASIC13.93□□□□□ -0.18
Sox6P40645 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Sox6P40645 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC13.93□□□□□ -0.18
Sox6P40645 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Sox6P40645 Map3k12-207ENSMUST00000169377 4210 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Sox6P40645 Ppfia3-201ENSMUST00000003961 4647 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Sox6P40645 Entpd5-204ENSMUST00000117286 1691 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Sox6P40645 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Sox6P40645 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Sox6P40645 Pag1-204ENSMUST00000161949 8256 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Sox6P40645 Stx5a-201ENSMUST00000010254 1780 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
Sox6P40645 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Sox6P40645 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Sox6P40645 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Sox6P40645 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Sox6P40645 Acap2-201ENSMUST00000058033 6493 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Sox6P40645 Rnf123-214ENSMUST00000162355 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Sox6P40645 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Sox6P40645 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Sox6P40645 Stk33-202ENSMUST00000106745 2410 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Sox6P40645 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Sox6P40645 Clec2h-201ENSMUST00000032518 2160 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Sox6P40645 Chodl-201ENSMUST00000023568 2535 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Sox6P40645 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Sox6P40645 Otop3-202ENSMUST00000106543 2369 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Sox6P40645 Gm11780-201ENSMUST00000136880 516 ntBASIC13.92□□□□□ -0.18
Sox6P40645 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC13.92□□□□□ -0.18
Sox6P40645 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
Sox6P40645 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC13.92□□□□□ -0.18
Sox6P40645 Gm18195-201ENSMUST00000207604 706 ntBASIC13.92□□□□□ -0.18
Sox6P40645 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
Sox6P40645 Exoc6-201ENSMUST00000066439 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Sox6P40645 Glyr1-202ENSMUST00000115844 3348 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Sox6P40645 Glyr1-201ENSMUST00000023189 3330 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Sox6P40645 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC13.92□□□□□ -0.18
Sox6P40645 Gm7669-201ENSMUST00000210184 1603 ntBASIC13.92□□□□□ -0.18
Sox6P40645 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Sox6P40645 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Sox6P40645 Gstt2-201ENSMUST00000038257 1370 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Sox6P40645 Arhgef33-201ENSMUST00000068175 3260 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
Sox6P40645 Kcnk6-201ENSMUST00000085818 4084 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Sox6P40645 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 31 ms