Protein–RNA interactions for Protein: P39749

Fen1, Flap endonuclease 1, mousemouse

Predictions only

Length 378 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fen1P39749 Ksr1-207ENSMUST00000226282 5260 ntBASIC14.95□□□□□ -0.02
Fen1P39749 Daxx-208ENSMUST00000174541 2325 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
Fen1P39749 Mink1-203ENSMUST00000079244 4829 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Fen1P39749 Pbx3-201ENSMUST00000040638 2587 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
Fen1P39749 Kcnh4-201ENSMUST00000107361 3748 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
Fen1P39749 Rgs3-204ENSMUST00000107420 2752 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Fen1P39749 Trmt10c-201ENSMUST00000059052 3002 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Fen1P39749 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Fen1P39749 Abl2-201ENSMUST00000027888 3549 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
Fen1P39749 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Fen1P39749 Rap1gap-203ENSMUST00000105835 4140 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
Fen1P39749 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Fen1P39749 Ablim1-202ENSMUST00000099294 6232 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
Fen1P39749 Sp2-203ENSMUST00000107624 3055 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Fen1P39749 Dnajb2-210ENSMUST00000188931 3066 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Fen1P39749 Crem-201ENSMUST00000025069 2931 ntTSL 5 BASIC14.94□□□□□ -0.02
Fen1P39749 Cuedc2-202ENSMUST00000167861 1941 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
Fen1P39749 1600014C10Rik-205ENSMUST00000178876 3283 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Fen1P39749 Epha1-201ENSMUST00000073387 3273 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Fen1P39749 Tbx3-201ENSMUST00000018748 4856 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Fen1P39749 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Fen1P39749 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Fen1P39749 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
Fen1P39749 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC14.94□□□□□ -0.02
Fen1P39749 Gm18622-201ENSMUST00000219361 595 ntBASIC14.94□□□□□ -0.02
Fen1P39749 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC14.94□□□□□ -0.02
Fen1P39749 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Fen1P39749 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Fen1P39749 Selenov-201ENSMUST00000056589 1267 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Fen1P39749 Cct6b-202ENSMUST00000100722 1871 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Fen1P39749 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Fen1P39749 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Fen1P39749 Vash1-201ENSMUST00000021681 2599 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Fen1P39749 Plch2-207ENSMUST00000139976 5322 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
Fen1P39749 Slc13a3-201ENSMUST00000029208 3524 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Fen1P39749 Gm37711-201ENSMUST00000194907 1749 ntTSL 5 BASIC14.94□□□□□ -0.02
Fen1P39749 Gm38391-201ENSMUST00000191720 4069 ntBASIC14.94□□□□□ -0.02
Fen1P39749 Armc9-205ENSMUST00000131412 2160 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Fen1P39749 Chodl-201ENSMUST00000023568 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Fen1P39749 Orai2-201ENSMUST00000041048 3908 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Fen1P39749 Eloa-201ENSMUST00000030427 4708 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Fen1P39749 Rragb-201ENSMUST00000039720 2258 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Fen1P39749 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
Fen1P39749 Retreg3-201ENSMUST00000017946 3165 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Fen1P39749 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC14.93□□□□□ -0.02
Fen1P39749 Leng9-201ENSMUST00000058358 2460 ntAPPRIS P1 BASIC14.93□□□□□ -0.02
Fen1P39749 Slc7a7-209ENSMUST00000226753 2126 ntAPPRIS P1 BASIC14.93□□□□□ -0.02
Fen1P39749 Tubgcp4-215ENSMUST00000186659 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Fen1P39749 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Fen1P39749 Zfp318-204ENSMUST00000138127 3936 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
Fen1P39749 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Fen1P39749 Ptpn11-202ENSMUST00000100770 5599 ntAPPRIS ALT1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Fen1P39749 4933435F18Rik-202ENSMUST00000154878 2174 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Fen1P39749 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Fen1P39749 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC14.93□□□□□ -0.02
Fen1P39749 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC14.93□□□□□ -0.02
Fen1P39749 Gm25745-201ENSMUST00000174945 133 ntBASIC14.93□□□□□ -0.02
Fen1P39749 Mir3081-201ENSMUST00000175305 84 ntBASIC14.93□□□□□ -0.02
Fen1P39749 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Fen1P39749 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
Fen1P39749 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Fen1P39749 Gm43399-201ENSMUST00000202546 2374 ntBASIC14.93□□□□□ -0.02
Fen1P39749 Klhl11-201ENSMUST00000056665 2393 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Fen1P39749 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Fen1P39749 Slc35c2-204ENSMUST00000109300 2008 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Fen1P39749 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Fen1P39749 Rtn4-205ENSMUST00000102843 4618 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Fen1P39749 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Fen1P39749 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Fen1P39749 Kdm2b-201ENSMUST00000031435 3532 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Fen1P39749 Gm42632-201ENSMUST00000201707 2411 ntBASIC14.93□□□□□ -0.02
Fen1P39749 Rnf144a-201ENSMUST00000020971 5164 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Fen1P39749 Wbscr25-202ENSMUST00000148729 2075 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Fen1P39749 Fmn2-201ENSMUST00000030039 6442 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Fen1P39749 Kif3a-201ENSMUST00000057330 2290 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Fen1P39749 Dhx9-202ENSMUST00000186380 4561 ntAPPRIS P2 TSL 2 BASIC14.92□□□□□ -0.02
Fen1P39749 Rasal3-207ENSMUST00000137458 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Fen1P39749 Ptpn6-203ENSMUST00000171549 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Fen1P39749 Rgs6-216ENSMUST00000200911 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Fen1P39749 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Fen1P39749 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
Fen1P39749 Gm17971-201ENSMUST00000190239 806 ntBASIC14.92□□□□□ -0.02
Fen1P39749 Fuz-206ENSMUST00000207485 1140 ntAPPRIS ALT1 TSL 5 BASIC14.92□□□□□ -0.02
Fen1P39749 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Fen1P39749 Gm18669-201ENSMUST00000216049 778 ntBASIC14.92□□□□□ -0.02
Fen1P39749 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Fen1P39749 Pspn-201ENSMUST00000002740 474 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Fen1P39749 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC14.92□□□□□ -0.02
Fen1P39749 Pccb-204ENSMUST00000149322 2188 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Fen1P39749 Rbbp9-201ENSMUST00000028915 2170 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Fen1P39749 Dym-201ENSMUST00000039608 2471 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Fen1P39749 Fbxl19-203ENSMUST00000186207 3178 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Fen1P39749 Csnk1d-201ENSMUST00000018274 3675 ntAPPRIS P4 TSL 1 (best) BASIC14.92□□□□□ -0.02
Fen1P39749 Sf3a1-201ENSMUST00000002198 4920 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Fen1P39749 Adgrb2-202ENSMUST00000097868 4635 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
Fen1P39749 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Fen1P39749 Rab11fip2-201ENSMUST00000051996 4482 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Fen1P39749 Sh3glb1-201ENSMUST00000163279 3961 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Fen1P39749 Adam15-201ENSMUST00000029676 2975 ntAPPRIS P4 TSL 1 (best) BASIC14.91□□□□□ -0.02
Fen1P39749 Gm26732-201ENSMUST00000181807 2771 ntTSL 5 BASIC14.91□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 25.7 ms