Protein–RNA interactions for Protein: P35582

Foxa1, Hepatocyte nuclear factor 3-alpha, mousemouse

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxa1P35582 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Foxa1P35582 4930438A08Rik-201ENSMUST00000108834 2093 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
Foxa1P35582 Crb2-201ENSMUST00000050372 6372 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
Foxa1P35582 Arl5c-201ENSMUST00000042971 1571 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Foxa1P35582 Gpam-201ENSMUST00000061856 3832 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Foxa1P35582 Dmkn-204ENSMUST00000085691 2007 ntAPPRIS P4 TSL 1 (best) BASIC13.71□□□□□ -0.21
Foxa1P35582 Macrod2-201ENSMUST00000043836 3552 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Foxa1P35582 P4ha2-201ENSMUST00000019050 2230 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
Foxa1P35582 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Foxa1P35582 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Foxa1P35582 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Foxa1P35582 Gm4995-201ENSMUST00000117247 432 ntBASIC13.71□□□□□ -0.21
Foxa1P35582 Gm15427-201ENSMUST00000117288 531 ntBASIC13.71□□□□□ -0.21
Foxa1P35582 Rpl18-ps1-201ENSMUST00000121555 525 ntBASIC13.71□□□□□ -0.21
Foxa1P35582 4933421O10Rik-201ENSMUST00000155691 3847 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Foxa1P35582 Gm36972-201ENSMUST00000194000 676 ntTSL 3 BASIC13.71□□□□□ -0.21
Foxa1P35582 Irs3-202ENSMUST00000196511 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Foxa1P35582 Gm29909-201ENSMUST00000214500 922 ntTSL 5 BASIC13.71□□□□□ -0.21
Foxa1P35582 Cidea-201ENSMUST00000025404 1164 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Foxa1P35582 Vkorc1-201ENSMUST00000033074 748 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Foxa1P35582 Olfr541-201ENSMUST00000080681 1103 ntAPPRIS P1 BASIC13.71□□□□□ -0.21
Foxa1P35582 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Foxa1P35582 Trim63-201ENSMUST00000030638 1855 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
Foxa1P35582 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Foxa1P35582 Nkd2-202ENSMUST00000118096 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.22
Foxa1P35582 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Foxa1P35582 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.22
Foxa1P35582 Dennd1a-201ENSMUST00000102787 4342 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Foxa1P35582 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Foxa1P35582 Vopp1-204ENSMUST00000145608 4590 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Foxa1P35582 Dok7-201ENSMUST00000050709 2498 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Foxa1P35582 Iqsec3-201ENSMUST00000046373 6840 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Foxa1P35582 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Foxa1P35582 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Foxa1P35582 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Foxa1P35582 Slc4a7-201ENSMUST00000057015 8132 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Foxa1P35582 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Foxa1P35582 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Foxa1P35582 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Foxa1P35582 Cops9-202ENSMUST00000112999 653 ntTSL 3 BASIC13.7□□□□□ -0.22
Foxa1P35582 Rabepk-202ENSMUST00000113086 1106 ntTSL 5 BASIC13.7□□□□□ -0.22
Foxa1P35582 Rhox7b-201ENSMUST00000115156 1091 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Foxa1P35582 1700030N18Rik-201ENSMUST00000202497 966 ntBASIC13.7□□□□□ -0.22
Foxa1P35582 Idh2-207ENSMUST00000206714 392 ntTSL 3 BASIC13.7□□□□□ -0.22
Foxa1P35582 Rhox7a-201ENSMUST00000096454 983 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Foxa1P35582 Rnf123-201ENSMUST00000047746 4722 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Foxa1P35582 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC13.7□□□□□ -0.22
Foxa1P35582 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Foxa1P35582 Xylt2-201ENSMUST00000116349 3442 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Foxa1P35582 Gm9768-201ENSMUST00000206007 2861 ntBASIC13.7□□□□□ -0.22
Foxa1P35582 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Foxa1P35582 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC13.7□□□□□ -0.22
Foxa1P35582 Arhgef40-220ENSMUST00000182909 5108 ntAPPRIS P4 TSL 5 BASIC13.7□□□□□ -0.22
Foxa1P35582 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Foxa1P35582 Gm38058-201ENSMUST00000194323 4368 ntBASIC13.7□□□□□ -0.22
Foxa1P35582 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Foxa1P35582 Tubgcp4-215ENSMUST00000186659 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Foxa1P35582 Furin-203ENSMUST00000122232 4286 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Foxa1P35582 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Foxa1P35582 Gm16976-201ENSMUST00000099718 1894 ntTSL 5 BASIC13.7□□□□□ -0.22
Foxa1P35582 Eif2d-202ENSMUST00000068805 2009 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Foxa1P35582 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Foxa1P35582 Mef2b-204ENSMUST00000110146 1342 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Foxa1P35582 P2rx3-203ENSMUST00000111616 1315 ntTSL 5 BASIC13.69□□□□□ -0.22
Foxa1P35582 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Foxa1P35582 Pld3-202ENSMUST00000117611 2297 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Foxa1P35582 Tfeb-201ENSMUST00000024786 2296 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Foxa1P35582 Gpr37l1-201ENSMUST00000027682 2269 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Foxa1P35582 Krt74-201ENSMUST00000088018 1648 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
Foxa1P35582 Smyd4-201ENSMUST00000044530 3517 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Foxa1P35582 Usp30-201ENSMUST00000031588 4604 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Foxa1P35582 Park7-204ENSMUST00000105675 882 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Foxa1P35582 Gm6226-201ENSMUST00000117765 1146 ntBASIC13.69□□□□□ -0.22
Foxa1P35582 H2af-ps-201ENSMUST00000119066 295 ntBASIC13.69□□□□□ -0.22
Foxa1P35582 Slc36a3os-201ENSMUST00000155883 520 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Foxa1P35582 Cldn25-ps-201ENSMUST00000197641 693 ntBASIC13.69□□□□□ -0.22
Foxa1P35582 CT025555.1-201ENSMUST00000225901 1217 ntBASIC13.69□□□□□ -0.22
Foxa1P35582 Gm9945-201ENSMUST00000067523 932 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
Foxa1P35582 Ntng2-204ENSMUST00000102873 1593 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Foxa1P35582 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
Foxa1P35582 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Foxa1P35582 Oser1-202ENSMUST00000104954 1702 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Foxa1P35582 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Foxa1P35582 Ppp1r8-201ENSMUST00000030702 2037 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Foxa1P35582 Fbxl19-201ENSMUST00000033081 3410 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Foxa1P35582 Spsb1-203ENSMUST00000105685 1537 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Foxa1P35582 Guca1b-201ENSMUST00000024774 1668 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Foxa1P35582 Gm5105-201ENSMUST00000053318 1665 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Foxa1P35582 Aatk-202ENSMUST00000103019 5177 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Foxa1P35582 Rad18-201ENSMUST00000068487 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Foxa1P35582 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Foxa1P35582 Tchh-201ENSMUST00000064257 5823 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Foxa1P35582 Pcdha5-201ENSMUST00000192168 5206 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Foxa1P35582 Syne3-201ENSMUST00000067005 5097 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Foxa1P35582 Dnmt3b-201ENSMUST00000056495 4318 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Foxa1P35582 Hectd2-201ENSMUST00000047247 4731 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Foxa1P35582 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Foxa1P35582 Slc25a19-201ENSMUST00000021089 2307 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Foxa1P35582 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
Foxa1P35582 Disp2-204ENSMUST00000110846 1732 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 40.9 ms