Protein–RNA interactions for Protein: P35441

Thbs1, Thrombospondin-1, mousemouse

Predictions only

Length 1,170 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thbs1P35441 Sympk-201ENSMUST00000023882 4116 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Thbs1P35441 Syvn1-203ENSMUST00000134667 3159 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Thbs1P35441 Gm10044-203ENSMUST00000166813 1471 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Thbs1P35441 Zufsp-205ENSMUST00000218880 2005 ntTSL 5 BASIC13.7□□□□□ -0.22
Thbs1P35441 Dnajc27-202ENSMUST00000049584 2934 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
Thbs1P35441 A230065H16Rik-201ENSMUST00000150384 670 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Thbs1P35441 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Thbs1P35441 Mfap2-203ENSMUST00000166376 890 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
Thbs1P35441 Tpi-rs2-201ENSMUST00000182471 756 ntBASIC13.7□□□□□ -0.22
Thbs1P35441 Gm27300-201ENSMUST00000184085 97 ntBASIC13.7□□□□□ -0.22
Thbs1P35441 Gm27335-201ENSMUST00000184758 97 ntBASIC13.7□□□□□ -0.22
Thbs1P35441 Gm27628-201ENSMUST00000184911 107 ntBASIC13.7□□□□□ -0.22
Thbs1P35441 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Thbs1P35441 Neurl2-201ENSMUST00000042775 1014 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Thbs1P35441 Olfr30-201ENSMUST00000055204 1066 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
Thbs1P35441 Map6d1-201ENSMUST00000040880 3273 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Thbs1P35441 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Thbs1P35441 Nfya-206ENSMUST00000160319 1407 ntTSL 5 BASIC13.7□□□□□ -0.22
Thbs1P35441 Tbx3os1-206ENSMUST00000202307 1787 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Thbs1P35441 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Thbs1P35441 Rasgrp2-208ENSMUST00000113476 2296 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Thbs1P35441 Gm13344-201ENSMUST00000137714 1557 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Thbs1P35441 Cul3-201ENSMUST00000163119 4709 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Thbs1P35441 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Thbs1P35441 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Thbs1P35441 Hpcal1-201ENSMUST00000071858 1526 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Thbs1P35441 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
Thbs1P35441 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Thbs1P35441 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Thbs1P35441 Rbbp9-201ENSMUST00000028915 2170 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Thbs1P35441 Arhgef40-220ENSMUST00000182909 5108 ntAPPRIS P4 TSL 5 BASIC13.69□□□□□ -0.22
Thbs1P35441 Adal-201ENSMUST00000028702 2471 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Thbs1P35441 Gm6297-201ENSMUST00000181475 2146 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Thbs1P35441 Gm9932-201ENSMUST00000194154 2116 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Thbs1P35441 Cgn-202ENSMUST00000107273 5016 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Thbs1P35441 Rad51-201ENSMUST00000028795 3368 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Thbs1P35441 Tmem254c-202ENSMUST00000100819 1211 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Thbs1P35441 Gemin7-204ENSMUST00000122055 609 ntAPPRIS P1 TSL 3 BASIC13.69□□□□□ -0.22
Thbs1P35441 Gm11750-201ENSMUST00000146016 583 ntTSL 5 BASIC13.69□□□□□ -0.22
Thbs1P35441 Timm23-206ENSMUST00000170331 777 ntTSL 3 BASIC13.69□□□□□ -0.22
Thbs1P35441 1700039E22Rik-201ENSMUST00000174082 770 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Thbs1P35441 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Thbs1P35441 2010010A06Rik-203ENSMUST00000190465 650 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Thbs1P35441 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Thbs1P35441 1700080E11Rik-201ENSMUST00000035180 883 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Thbs1P35441 Mrpl34-201ENSMUST00000048914 607 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Thbs1P35441 Rogdi-202ENSMUST00000090453 652 ntTSL 5 BASIC13.69□□□□□ -0.22
Thbs1P35441 Cdkn1b-201ENSMUST00000003115 2393 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Thbs1P35441 Cnnm2-201ENSMUST00000077666 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Thbs1P35441 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Thbs1P35441 Adgrb2-208ENSMUST00000121049 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Thbs1P35441 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Thbs1P35441 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Thbs1P35441 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Thbs1P35441 Slc44a5-201ENSMUST00000089948 4098 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Thbs1P35441 Tmem185b-202ENSMUST00000183952 2824 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
Thbs1P35441 Med14-202ENSMUST00000096495 6963 ntAPPRIS P2 TSL 5 BASIC13.68□□□□□ -0.22
Thbs1P35441 Gm8237-201ENSMUST00000164484 2051 ntAPPRIS P5 TSL 5 BASIC13.68□□□□□ -0.22
Thbs1P35441 Snx8-205ENSMUST00000196566 1914 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Thbs1P35441 Prpf31-202ENSMUST00000108636 1798 ntTSL 5 BASIC13.68□□□□□ -0.22
Thbs1P35441 Csgalnact2-201ENSMUST00000049344 3661 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Thbs1P35441 Miga1-202ENSMUST00000073089 4965 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Thbs1P35441 Prickle1-201ENSMUST00000048982 4085 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Thbs1P35441 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC13.68□□□□□ -0.22
Thbs1P35441 Pycr1-201ENSMUST00000026133 1861 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Thbs1P35441 Osbpl10-201ENSMUST00000046627 1872 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Thbs1P35441 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Thbs1P35441 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Thbs1P35441 Gm21586-201ENSMUST00000107988 264 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Thbs1P35441 Gm21953-201ENSMUST00000108002 264 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Thbs1P35441 Gm12981-201ENSMUST00000131733 622 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Thbs1P35441 Psmb1-201ENSMUST00000014913 1036 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Thbs1P35441 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Thbs1P35441 Gm2272-201ENSMUST00000194903 582 ntBASIC13.68□□□□□ -0.22
Thbs1P35441 6030408B16Rik-201ENSMUST00000071328 1155 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Thbs1P35441 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Thbs1P35441 Zfp90-203ENSMUST00000212606 2685 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Thbs1P35441 Pou2f3-202ENSMUST00000176636 2522 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Thbs1P35441 Uck2-202ENSMUST00000053686 4731 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Thbs1P35441 Dlat-201ENSMUST00000034567 4035 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Thbs1P35441 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC13.68□□□□□ -0.22
Thbs1P35441 Mus81-202ENSMUST00000124334 2067 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Thbs1P35441 Snrpn-202ENSMUST00000098402 2076 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Thbs1P35441 Rps6ka5-201ENSMUST00000043599 4406 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Thbs1P35441 Btd-201ENSMUST00000090147 2324 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Thbs1P35441 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Thbs1P35441 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Thbs1P35441 Pccb-204ENSMUST00000149322 2188 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Thbs1P35441 Edem3-204ENSMUST00000191070 3127 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Thbs1P35441 Prkab2-201ENSMUST00000045743 5006 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Thbs1P35441 Fam131a-201ENSMUST00000056518 2432 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Thbs1P35441 Morc4-201ENSMUST00000033811 4412 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Thbs1P35441 Abhd15-201ENSMUST00000094004 2662 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Thbs1P35441 Ttc13-210ENSMUST00000214828 3301 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Thbs1P35441 Disp2-204ENSMUST00000110846 1732 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Thbs1P35441 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Thbs1P35441 Xylt2-201ENSMUST00000116349 3442 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Thbs1P35441 Zfand3-201ENSMUST00000057897 2617 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Thbs1P35441 Slc8b1-201ENSMUST00000068326 2898 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Thbs1P35441 Ghdc-201ENSMUST00000017891 2462 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 46 ms