Protein–RNA interactions for Protein: P35278

Rab5c, Ras-related protein Rab-5C, mousemouse

Predictions only

Length 216 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab5cP35278 Slc45a1-201ENSMUST00000037827 3387 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Rab5cP35278 St3gal3-202ENSMUST00000097912 2143 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Rab5cP35278 Ephb1-202ENSMUST00000085169 4101 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Rab5cP35278 Gm18244-201ENSMUST00000219747 1566 ntBASIC12.09□□□□□ -0.47
Rab5cP35278 Elmod1-201ENSMUST00000048409 2605 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Rab5cP35278 Gm9913-201ENSMUST00000066157 2793 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
Rab5cP35278 Cdsn-201ENSMUST00000044804 2678 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Rab5cP35278 Gm37711-201ENSMUST00000194907 1749 ntTSL 5 BASIC12.09□□□□□ -0.47
Rab5cP35278 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Rab5cP35278 Dnase1l1-201ENSMUST00000019232 1625 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Rab5cP35278 Diaph1-204ENSMUST00000115631 5741 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Rab5cP35278 Per1-203ENSMUST00000102605 4537 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Rab5cP35278 Hp1bp3-204ENSMUST00000105826 3348 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Rab5cP35278 St13-205ENSMUST00000172107 3346 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Rab5cP35278 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Rab5cP35278 Apbb1-215ENSMUST00000190369 1882 ntTSL 5 BASIC12.09□□□□□ -0.47
Rab5cP35278 Nudt21-201ENSMUST00000034204 5010 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Rab5cP35278 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Rab5cP35278 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC12.09□□□□□ -0.47
Rab5cP35278 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Rab5cP35278 Vdac2-209ENSMUST00000173456 956 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Rab5cP35278 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC12.09□□□□□ -0.47
Rab5cP35278 Gm26571-201ENSMUST00000181399 666 ntBASIC12.09□□□□□ -0.47
Rab5cP35278 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Rab5cP35278 Mbnl2-204ENSMUST00000227012 2390 ntBASIC12.09□□□□□ -0.47
Rab5cP35278 Gars-201ENSMUST00000003572 2380 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Rab5cP35278 Snx14-204ENSMUST00000165315 3109 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Rab5cP35278 Pde1c-209ENSMUST00000203372 3147 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Rab5cP35278 Arpc1b-201ENSMUST00000085679 3105 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Rab5cP35278 Gm15850-201ENSMUST00000134998 2049 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Rab5cP35278 Rxrb-202ENSMUST00000116612 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Rab5cP35278 Aldh1b1-201ENSMUST00000044384 2298 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Rab5cP35278 Snph-202ENSMUST00000094456 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Rab5cP35278 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Rab5cP35278 Rasl12-202ENSMUST00000165682 1903 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Rab5cP35278 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Rab5cP35278 Mynn-202ENSMUST00000192715 5555 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Rab5cP35278 Med28-205ENSMUST00000156481 4560 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Rab5cP35278 Naa50-201ENSMUST00000063520 3557 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Rab5cP35278 Abcf2-201ENSMUST00000030795 2569 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Rab5cP35278 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Rab5cP35278 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Rab5cP35278 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Rab5cP35278 Aggf1-201ENSMUST00000022189 3249 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Rab5cP35278 Noct-203ENSMUST00000167780 2992 ntAPPRIS P2 TSL 5 BASIC12.09□□□□□ -0.47
Rab5cP35278 Ugt1a8-201ENSMUST00000113139 2227 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Rab5cP35278 Gm42872-201ENSMUST00000200026 1967 ntBASIC12.09□□□□□ -0.47
Rab5cP35278 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Rab5cP35278 Itga6-202ENSMUST00000112101 4156 ntAPPRIS ALT1 TSL 5 BASIC12.08□□□□□ -0.47
Rab5cP35278 Nudt18-201ENSMUST00000089049 3926 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
Rab5cP35278 Tnip2-201ENSMUST00000030991 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Rab5cP35278 Ahcyl2-201ENSMUST00000064872 2019 ntAPPRIS ALT1 TSL 5 BASIC12.08□□□□□ -0.48
Rab5cP35278 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Rab5cP35278 C530008M17Rik-204ENSMUST00000121160 6921 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
Rab5cP35278 Fam46a-201ENSMUST00000034802 5479 ntAPPRIS P3 TSL 3 BASIC12.08□□□□□ -0.48
Rab5cP35278 Tspyl5-201ENSMUST00000042021 4010 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
Rab5cP35278 Bend3-201ENSMUST00000040147 5882 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Rab5cP35278 Myh3-202ENSMUST00000108689 6031 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Rab5cP35278 Gm42748-201ENSMUST00000199354 2341 ntBASIC12.08□□□□□ -0.48
Rab5cP35278 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Rab5cP35278 Nfatc4-201ENSMUST00000024179 3267 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
Rab5cP35278 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Rab5cP35278 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC12.08□□□□□ -0.48
Rab5cP35278 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC12.08□□□□□ -0.48
Rab5cP35278 AC122351.1-201ENSMUST00000220467 126 ntBASIC12.08□□□□□ -0.48
Rab5cP35278 CT009713.7-201ENSMUST00000224689 571 ntBASIC12.08□□□□□ -0.48
Rab5cP35278 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Rab5cP35278 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Rab5cP35278 Olfml2a-201ENSMUST00000057279 5579 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Rab5cP35278 Anks1b-213ENSMUST00000182284 2607 ntTSL 5 BASIC12.08□□□□□ -0.48
Rab5cP35278 Cabp7-201ENSMUST00000009219 2628 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Rab5cP35278 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Rab5cP35278 Rnf44-201ENSMUST00000037422 3734 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Rab5cP35278 Rgs9bp-201ENSMUST00000069912 6590 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
Rab5cP35278 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Rab5cP35278 Prkca-202ENSMUST00000100302 2265 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Rab5cP35278 Adrb3-203ENSMUST00000121838 1864 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Rab5cP35278 Jade1-204ENSMUST00000170711 2896 ntTSL 5 BASIC12.08□□□□□ -0.48
Rab5cP35278 Mindy3-201ENSMUST00000028105 2344 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Rab5cP35278 Map7d1-202ENSMUST00000106132 3195 ntAPPRIS ALT2 TSL 2 BASIC12.08□□□□□ -0.48
Rab5cP35278 Ssr1-204ENSMUST00000225319 1610 ntBASIC12.08□□□□□ -0.48
Rab5cP35278 Sgms1-212ENSMUST00000151289 2488 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Rab5cP35278 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Rab5cP35278 Hnf1b-201ENSMUST00000021016 2759 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Rab5cP35278 Dennd6b-201ENSMUST00000078953 4607 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Rab5cP35278 Myl12a-206ENSMUST00000148960 1937 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Rab5cP35278 Gm6198-201ENSMUST00000191337 2929 ntBASIC12.07□□□□□ -0.48
Rab5cP35278 9930014A18Rik-201ENSMUST00000180730 3074 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Rab5cP35278 Rundc1-201ENSMUST00000040561 3223 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Rab5cP35278 Alox5-201ENSMUST00000026795 2821 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Rab5cP35278 Nr2c2-201ENSMUST00000113460 7647 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Rab5cP35278 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Rab5cP35278 Slc5a6-202ENSMUST00000114668 3436 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Rab5cP35278 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Rab5cP35278 Endou-202ENSMUST00000100249 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Rab5cP35278 Endou-201ENSMUST00000023105 2404 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Rab5cP35278 P2ry2-201ENSMUST00000037540 3011 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Rab5cP35278 Cad-206ENSMUST00000201838 3153 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Rab5cP35278 Itfg1-201ENSMUST00000034140 3306 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Rab5cP35278 Med22-202ENSMUST00000102899 3506 ntAPPRIS ALT1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 43.5 ms