Protein–RNA interactions for Protein: P35242

Sftpa1, Pulmonary surfactant-associated protein A, mousemouse

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sftpa1P35242 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Sftpa1P35242 Crybb3-204ENSMUST00000119627 828 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
Sftpa1P35242 Tmem219-204ENSMUST00000121532 915 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Sftpa1P35242 Tnfrsf12a-202ENSMUST00000167059 858 ntTSL 2 BASIC13.64□□□□□ -0.23
Sftpa1P35242 1700021A07Rik-203ENSMUST00000188024 404 ntTSL 3 BASIC13.64□□□□□ -0.23
Sftpa1P35242 Gm42196-201ENSMUST00000209618 730 ntTSL 5 BASIC13.64□□□□□ -0.23
Sftpa1P35242 Gm45668-201ENSMUST00000211271 493 ntBASIC13.64□□□□□ -0.23
Sftpa1P35242 Tnfrsf12a-201ENSMUST00000024698 963 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Sftpa1P35242 Ccdc58-201ENSMUST00000099937 747 ntTSL 3 BASIC13.64□□□□□ -0.23
Sftpa1P35242 Mastl-201ENSMUST00000028119 5590 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Sftpa1P35242 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
Sftpa1P35242 Pou2f3-202ENSMUST00000176636 2522 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Sftpa1P35242 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Sftpa1P35242 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Sftpa1P35242 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Sftpa1P35242 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Sftpa1P35242 Eif4a3-201ENSMUST00000026667 1509 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Sftpa1P35242 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Sftpa1P35242 Ociad1-202ENSMUST00000071081 1311 ntTSL 3 BASIC13.64□□□□□ -0.23
Sftpa1P35242 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Sftpa1P35242 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Sftpa1P35242 Comt-202ENSMUST00000115609 1786 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Sftpa1P35242 Slc9a3r2-202ENSMUST00000019684 1688 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Sftpa1P35242 Krt14-201ENSMUST00000007272 1698 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Sftpa1P35242 Palb2-201ENSMUST00000063587 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Sftpa1P35242 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Sftpa1P35242 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC13.63□□□□□ -0.23
Sftpa1P35242 Ntf3-201ENSMUST00000050484 1483 ntAPPRIS P3 TSL 2 BASIC13.63□□□□□ -0.23
Sftpa1P35242 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
Sftpa1P35242 Pitpnm2-209ENSMUST00000161938 5866 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Sftpa1P35242 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Sftpa1P35242 Pld2-202ENSMUST00000108556 3391 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Sftpa1P35242 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Sftpa1P35242 Ighv4-1-201ENSMUST00000103464 414 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
Sftpa1P35242 Mbd3-202ENSMUST00000105347 914 ntTSL 2 BASIC13.63□□□□□ -0.23
Sftpa1P35242 Gm16000-201ENSMUST00000146657 447 ntTSL 2 BASIC13.63□□□□□ -0.23
Sftpa1P35242 Ucma-204ENSMUST00000167607 785 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Sftpa1P35242 Lrcol1-202ENSMUST00000185691 764 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Sftpa1P35242 Rpp21-201ENSMUST00000025319 729 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Sftpa1P35242 Prtn3-201ENSMUST00000006679 1025 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Sftpa1P35242 Ndufa8-201ENSMUST00000070112 861 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Sftpa1P35242 Gm6471-201ENSMUST00000097935 805 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Sftpa1P35242 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Sftpa1P35242 Etfrf1-205ENSMUST00000111724 1618 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Sftpa1P35242 Mettl7a3-201ENSMUST00000075420 1618 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Sftpa1P35242 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Sftpa1P35242 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC13.63□□□□□ -0.23
Sftpa1P35242 Sept8-202ENSMUST00000117061 4563 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Sftpa1P35242 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC13.63□□□□□ -0.23
Sftpa1P35242 Adrb3-203ENSMUST00000121838 1864 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Sftpa1P35242 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Sftpa1P35242 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
Sftpa1P35242 Arhgef12-202ENSMUST00000165665 10752 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Sftpa1P35242 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Sftpa1P35242 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Sftpa1P35242 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Sftpa1P35242 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Sftpa1P35242 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Sftpa1P35242 Ube2j2-206ENSMUST00000118192 922 ntTSL 5 BASIC13.62□□□□□ -0.23
Sftpa1P35242 Pisd-ps1-201ENSMUST00000119128 1115 ntBASIC13.62□□□□□ -0.23
Sftpa1P35242 Gm13829-201ENSMUST00000119600 138 ntBASIC13.62□□□□□ -0.23
Sftpa1P35242 Chchd7-207ENSMUST00000121210 548 ntTSL 2 BASIC13.62□□□□□ -0.23
Sftpa1P35242 Pigyl-201ENSMUST00000123680 695 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
Sftpa1P35242 Gm12352-201ENSMUST00000154452 760 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Sftpa1P35242 A930015D03Rik-201ENSMUST00000173900 1111 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Sftpa1P35242 Wfdc2-201ENSMUST00000017867 849 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Sftpa1P35242 Poc1a-205ENSMUST00000191434 1242 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Sftpa1P35242 Gm31728-201ENSMUST00000192164 435 ntTSL 3 BASIC13.62□□□□□ -0.23
Sftpa1P35242 Gm37917-201ENSMUST00000194711 392 ntBASIC13.62□□□□□ -0.23
Sftpa1P35242 Gm42722-201ENSMUST00000198855 940 ntTSL 3 BASIC13.62□□□□□ -0.23
Sftpa1P35242 1700028J19Rik-203ENSMUST00000206686 1166 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Sftpa1P35242 Coa6-202ENSMUST00000211868 564 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Sftpa1P35242 Gm7390-201ENSMUST00000212452 1216 ntBASIC13.62□□□□□ -0.23
Sftpa1P35242 AC153526.5-201ENSMUST00000218661 2147 ntBASIC13.62□□□□□ -0.23
Sftpa1P35242 Ifitm3-201ENSMUST00000026565 678 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Sftpa1P35242 Sh3bgrl3-201ENSMUST00000030651 743 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Sftpa1P35242 Olfr1412-201ENSMUST00000062964 966 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
Sftpa1P35242 Gm15823-201ENSMUST00000064305 670 ntBASIC13.62□□□□□ -0.23
Sftpa1P35242 Asb10-203ENSMUST00000119657 1536 ntTSL 5 BASIC13.62□□□□□ -0.23
Sftpa1P35242 Tcf21-202ENSMUST00000218002 1788 ntBASIC13.62□□□□□ -0.23
Sftpa1P35242 Golim4-201ENSMUST00000038563 5546 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Sftpa1P35242 Gm26688-201ENSMUST00000181176 1568 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Sftpa1P35242 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Sftpa1P35242 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Sftpa1P35242 Tead1-201ENSMUST00000059768 9964 ntAPPRIS P4 TSL 1 (best) BASIC13.61□□□□□ -0.23
Sftpa1P35242 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Sftpa1P35242 Fndc3a-201ENSMUST00000089017 6143 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Sftpa1P35242 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Sftpa1P35242 Prrxl1-203ENSMUST00000187377 1629 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Sftpa1P35242 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Sftpa1P35242 Dmkn-204ENSMUST00000085691 2007 ntAPPRIS P4 TSL 1 (best) BASIC13.61□□□□□ -0.23
Sftpa1P35242 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC13.61□□□□□ -0.23
Sftpa1P35242 Dhrs4-201ENSMUST00000022821 1392 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Sftpa1P35242 Wdyhv1-201ENSMUST00000067563 1383 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Sftpa1P35242 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Sftpa1P35242 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Sftpa1P35242 Myl12a-206ENSMUST00000148960 1937 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Sftpa1P35242 Adgrb2-205ENSMUST00000106017 5104 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Sftpa1P35242 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Sftpa1P35242 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 24.1 ms