Protein–RNA interactions for Protein: P31649

Slc6a13, Sodium- and chloride-dependent GABA transporter 2, mousemouse

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a13P31649 Syde2-204ENSMUST00000212479 3810 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
Slc6a13P31649 1700021F07Rik-201ENSMUST00000029023 646 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Slc6a13P31649 Vkorc1-201ENSMUST00000033074 748 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Slc6a13P31649 Hcrt-201ENSMUST00000055083 586 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Slc6a13P31649 Nutf2-201ENSMUST00000008594 948 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Slc6a13P31649 Lrrc41-201ENSMUST00000030471 3065 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Slc6a13P31649 Nsun7-203ENSMUST00000201100 2775 ntAPPRIS P3 TSL 5 BASIC15.04■□□□□ -0
Slc6a13P31649 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Slc6a13P31649 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC15.04■□□□□ -0
Slc6a13P31649 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC15.04■□□□□ -0
Slc6a13P31649 Ralgds-201ENSMUST00000028170 3590 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
Slc6a13P31649 Tmem38a-201ENSMUST00000034244 2124 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Slc6a13P31649 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Slc6a13P31649 Necap2-201ENSMUST00000030760 1906 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Slc6a13P31649 Teddm2-202ENSMUST00000123490 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Slc6a13P31649 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Slc6a13P31649 Tpi1-205ENSMUST00000172132 1607 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Slc6a13P31649 Mbtd1-202ENSMUST00000063718 3785 ntTSL 1 (best) BASIC15.03■□□□□ -0
Slc6a13P31649 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
Slc6a13P31649 Gm43509-201ENSMUST00000196551 2594 ntBASIC15.03■□□□□ -0
Slc6a13P31649 Pimreg-201ENSMUST00000021164 1513 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Slc6a13P31649 Olah-201ENSMUST00000027955 1533 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Slc6a13P31649 Arhgap11a-204ENSMUST00000110949 4458 ntAPPRIS P2 TSL 5 BASIC15.03■□□□□ -0
Slc6a13P31649 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Slc6a13P31649 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC15.03■□□□□ -0
Slc6a13P31649 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Slc6a13P31649 Rhox7b-201ENSMUST00000115156 1091 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Slc6a13P31649 Gm13464-201ENSMUST00000119418 935 ntBASIC15.03■□□□□ -0
Slc6a13P31649 C1qa-201ENSMUST00000046285 1040 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Slc6a13P31649 Ndufb6-201ENSMUST00000095128 659 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Slc6a13P31649 Rhox7a-201ENSMUST00000096454 983 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Slc6a13P31649 Slc35e2-201ENSMUST00000043829 2910 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Slc6a13P31649 Tubb3-201ENSMUST00000071134 1868 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Slc6a13P31649 Dse-201ENSMUST00000048010 4389 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Slc6a13P31649 Anks1-203ENSMUST00000114842 5610 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
Slc6a13P31649 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
Slc6a13P31649 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC15.03■□□□□ -0
Slc6a13P31649 Spcs2-210ENSMUST00000209032 1610 ntTSL 5 BASIC15.03■□□□□ -0
Slc6a13P31649 Tchp-201ENSMUST00000094441 2882 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Slc6a13P31649 Klhl26-202ENSMUST00000166976 2734 ntTSL 2 BASIC15.02■□□□□ -0
Slc6a13P31649 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC15.02■□□□□ -0
Slc6a13P31649 Aldh16a1-201ENSMUST00000107815 2685 ntTSL 1 (best) BASIC15.02■□□□□ -0
Slc6a13P31649 Inha-201ENSMUST00000037330 1475 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Slc6a13P31649 Mapk8ip3-203ENSMUST00000115229 5603 ntAPPRIS ALT2 TSL 5 BASIC15.02■□□□□ -0
Slc6a13P31649 Adam9-202ENSMUST00000084035 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
Slc6a13P31649 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Slc6a13P31649 Adarb1-202ENSMUST00000098374 6584 ntTSL 1 (best) BASIC15.02■□□□□ -0
Slc6a13P31649 Sfxn5-203ENSMUST00000113787 638 ntTSL 2 BASIC15.02■□□□□ -0
Slc6a13P31649 Il15ra-206ENSMUST00000114834 784 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
Slc6a13P31649 Gm4913-201ENSMUST00000117075 1290 ntBASIC15.02■□□□□ -0
Slc6a13P31649 Edn3-203ENSMUST00000140908 731 ntAPPRIS ALT2 TSL 5 BASIC15.02■□□□□ -0
Slc6a13P31649 Gm10244-202ENSMUST00000156905 474 ntTSL 3 BASIC15.02■□□□□ -0
Slc6a13P31649 Ybx1-ps2-201ENSMUST00000201305 957 ntBASIC15.02■□□□□ -0
Slc6a13P31649 Pde6g-201ENSMUST00000026452 900 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Slc6a13P31649 Rab33a-201ENSMUST00000033430 1158 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Slc6a13P31649 Acp6-201ENSMUST00000090759 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Slc6a13P31649 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Slc6a13P31649 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Slc6a13P31649 Map3k12-207ENSMUST00000169377 4210 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Slc6a13P31649 Oser1-202ENSMUST00000104954 1702 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Slc6a13P31649 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Slc6a13P31649 Zfand3-201ENSMUST00000057897 2617 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Slc6a13P31649 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Slc6a13P31649 Pcdha9-201ENSMUST00000115659 5341 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Slc6a13P31649 Hs3st3a1-201ENSMUST00000058652 3939 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Slc6a13P31649 Csnk1g1-212ENSMUST00000206048 2073 ntAPPRIS ALT2 TSL 5 BASIC15.02□□□□□ -0.01
Slc6a13P31649 Tmem87b-201ENSMUST00000110325 4807 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Slc6a13P31649 Senp6-202ENSMUST00000164859 3853 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Slc6a13P31649 Cbfb-203ENSMUST00000109394 2487 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Slc6a13P31649 Ttc13-210ENSMUST00000214828 3301 ntAPPRIS P1 TSL 5 BASIC15.02□□□□□ -0.01
Slc6a13P31649 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Slc6a13P31649 Gm39244-202ENSMUST00000210837 1857 ntTSL 5 BASIC15.01□□□□□ -0.01
Slc6a13P31649 Oxr1-206ENSMUST00000170127 4251 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Slc6a13P31649 5730559C18Rik-201ENSMUST00000120339 2988 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Slc6a13P31649 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
Slc6a13P31649 Gm14026-201ENSMUST00000120625 1789 ntBASIC15.01□□□□□ -0.01
Slc6a13P31649 Rgs20-201ENSMUST00000002533 1778 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
Slc6a13P31649 Epb41l1-204ENSMUST00000103137 6490 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Slc6a13P31649 Pcsk4-201ENSMUST00000020340 2539 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Slc6a13P31649 Ahcy-201ENSMUST00000054607 2543 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Slc6a13P31649 Ctnnb1-201ENSMUST00000007130 3623 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Slc6a13P31649 8430429K09Rik-204ENSMUST00000146456 1675 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Slc6a13P31649 Spns1-202ENSMUST00000119754 2001 ntTSL 5 BASIC15.01□□□□□ -0.01
Slc6a13P31649 Tinf2-205ENSMUST00000227842 2001 ntAPPRIS ALT2 BASIC15.01□□□□□ -0.01
Slc6a13P31649 Pex5-201ENSMUST00000035861 3139 ntAPPRIS P4 TSL 1 (best) BASIC15.01□□□□□ -0.01
Slc6a13P31649 Rhoj-202ENSMUST00000118602 2396 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Slc6a13P31649 Aig1-202ENSMUST00000105534 617 ntTSL 5 BASIC15.01□□□□□ -0.01
Slc6a13P31649 Apip-201ENSMUST00000011055 919 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Slc6a13P31649 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Slc6a13P31649 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Slc6a13P31649 Gm15492-201ENSMUST00000156734 606 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Slc6a13P31649 Gm44123-201ENSMUST00000204662 577 ntTSL 5 BASIC15.01□□□□□ -0.01
Slc6a13P31649 AC131187.1-201ENSMUST00000224567 809 ntBASIC15.01□□□□□ -0.01
Slc6a13P31649 C1qtnf2-201ENSMUST00000057679 1211 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Slc6a13P31649 Slbp-202ENSMUST00000075670 1027 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Slc6a13P31649 Sphk1-205ENSMUST00000106387 1957 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
Slc6a13P31649 Gm26850-201ENSMUST00000181653 2669 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Slc6a13P31649 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Slc6a13P31649 Fkbp10-201ENSMUST00000001595 2584 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Slc6a13P31649 Mettl2-201ENSMUST00000021030 1867 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 52.8 ms