Protein–RNA interactions for Protein: P31648

Slc6a1, Sodium- and chloride-dependent GABA transporter 1, mousemouse

Predictions only

Length 599 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a1P31648 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
Slc6a1P31648 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC12.78□□□□□ -0.36
Slc6a1P31648 Gm27741-201ENSMUST00000185060 237 ntBASIC12.78□□□□□ -0.36
Slc6a1P31648 Otx2os1-206ENSMUST00000228153 787 ntBASIC12.78□□□□□ -0.36
Slc6a1P31648 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
Slc6a1P31648 Prr18-201ENSMUST00000069742 3407 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Slc6a1P31648 Rbm22-201ENSMUST00000025506 2210 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Slc6a1P31648 Gm43056-201ENSMUST00000197865 2791 ntBASIC12.78□□□□□ -0.36
Slc6a1P31648 Dis3-201ENSMUST00000042471 5150 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Slc6a1P31648 Spg20-201ENSMUST00000044116 3770 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Slc6a1P31648 Sohlh2-201ENSMUST00000029369 2364 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Slc6a1P31648 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Slc6a1P31648 Ttyh2-201ENSMUST00000045779 3486 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Slc6a1P31648 Rbm33-202ENSMUST00000059644 9510 ntAPPRIS P2 TSL 5 BASIC12.78□□□□□ -0.36
Slc6a1P31648 Mfrp-205ENSMUST00000206308 4037 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Slc6a1P31648 Socs3-201ENSMUST00000054002 2552 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Slc6a1P31648 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Slc6a1P31648 Sike1-201ENSMUST00000029447 7375 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Slc6a1P31648 Ccnj-201ENSMUST00000025983 3819 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Slc6a1P31648 Cobl-201ENSMUST00000046755 5615 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.36
Slc6a1P31648 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Slc6a1P31648 Noct-203ENSMUST00000167780 2992 ntAPPRIS P2 TSL 5 BASIC12.77□□□□□ -0.36
Slc6a1P31648 Ubiad1-201ENSMUST00000051633 2992 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Slc6a1P31648 4632428C04Rik-201ENSMUST00000181485 2430 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Slc6a1P31648 Shc4-203ENSMUST00000110480 3671 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Slc6a1P31648 Kcnc4-201ENSMUST00000009617 3667 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Slc6a1P31648 Apbb1-215ENSMUST00000190369 1882 ntTSL 5 BASIC12.77□□□□□ -0.37
Slc6a1P31648 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.37
Slc6a1P31648 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Slc6a1P31648 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC12.77□□□□□ -0.37
Slc6a1P31648 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Slc6a1P31648 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Slc6a1P31648 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
Slc6a1P31648 Nxpe5-202ENSMUST00000159798 2568 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Slc6a1P31648 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Slc6a1P31648 Col7a1-202ENSMUST00000112070 9250 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
Slc6a1P31648 Gm6198-201ENSMUST00000191337 2929 ntBASIC12.77□□□□□ -0.37
Slc6a1P31648 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Slc6a1P31648 Morc4-201ENSMUST00000033811 4412 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
Slc6a1P31648 Zfp879-202ENSMUST00000109133 2229 ntTSL 5 BASIC12.77□□□□□ -0.37
Slc6a1P31648 Nek7-202ENSMUST00000186017 5258 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Slc6a1P31648 Mindy3-201ENSMUST00000028105 2344 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Slc6a1P31648 Gm12500-202ENSMUST00000186471 2428 ntBASIC12.77□□□□□ -0.37
Slc6a1P31648 Slc4a1ap-213ENSMUST00000202950 2499 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
Slc6a1P31648 Mfrp-202ENSMUST00000161381 4254 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Slc6a1P31648 Wnk1-223ENSMUST00000177761 11303 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Slc6a1P31648 Gucd1-201ENSMUST00000039796 3500 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Slc6a1P31648 Rcbtb1-202ENSMUST00000043227 3903 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Slc6a1P31648 Kcnq2-220ENSMUST00000197015 8031 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Slc6a1P31648 Fbrs-202ENSMUST00000205432 4166 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Slc6a1P31648 Bid-201ENSMUST00000004560 2189 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Slc6a1P31648 Irf7-203ENSMUST00000106023 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Slc6a1P31648 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Slc6a1P31648 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC12.76□□□□□ -0.37
Slc6a1P31648 AC125350.1-201ENSMUST00000225115 903 ntBASIC12.76□□□□□ -0.37
Slc6a1P31648 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
Slc6a1P31648 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC12.76□□□□□ -0.37
Slc6a1P31648 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Slc6a1P31648 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Slc6a1P31648 Tle3-201ENSMUST00000034820 4646 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Slc6a1P31648 Fbxo3-201ENSMUST00000028603 4740 ntAPPRIS P4 TSL 1 (best) BASIC12.76□□□□□ -0.37
Slc6a1P31648 Ssr1-204ENSMUST00000225319 1610 ntBASIC12.76□□□□□ -0.37
Slc6a1P31648 Slc39a3-201ENSMUST00000059551 3680 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Slc6a1P31648 Tpr-203ENSMUST00000124973 7430 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Slc6a1P31648 St3gal3-202ENSMUST00000097912 2143 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Slc6a1P31648 Fbxo41-201ENSMUST00000159062 6505 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Slc6a1P31648 Tjap1-211ENSMUST00000225080 2412 ntAPPRIS P2 BASIC12.76□□□□□ -0.37
Slc6a1P31648 Susd6-201ENSMUST00000068519 4977 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Slc6a1P31648 Eif4e3-201ENSMUST00000032151 2515 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Slc6a1P31648 Adamts7-201ENSMUST00000113059 5379 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
Slc6a1P31648 Flt3-201ENSMUST00000049324 3657 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Slc6a1P31648 Atp2b3-201ENSMUST00000033744 3894 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Slc6a1P31648 Pik3c2b-201ENSMUST00000077730 7928 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Slc6a1P31648 Dnmt3b-201ENSMUST00000056495 4318 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
Slc6a1P31648 Fzd7-201ENSMUST00000114246 4532 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
Slc6a1P31648 Eif4g3-215ENSMUST00000203828 5289 ntTSL 5 BASIC12.75□□□□□ -0.37
Slc6a1P31648 Eif4g1-204ENSMUST00000115460 5638 ntAPPRIS P3 TSL 5 BASIC12.75□□□□□ -0.37
Slc6a1P31648 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Slc6a1P31648 Sphk1-205ENSMUST00000106387 1957 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
Slc6a1P31648 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Slc6a1P31648 Zfp467-203ENSMUST00000114558 3115 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Slc6a1P31648 Gm7153-201ENSMUST00000117092 455 ntBASIC12.75□□□□□ -0.37
Slc6a1P31648 Iffo1-201ENSMUST00000117675 2833 ntAPPRIS P4 TSL 1 (best) BASIC12.75□□□□□ -0.37
Slc6a1P31648 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Slc6a1P31648 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Slc6a1P31648 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Slc6a1P31648 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Slc6a1P31648 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC12.75□□□□□ -0.37
Slc6a1P31648 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Slc6a1P31648 Ppt2-210ENSMUST00000171376 1750 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Slc6a1P31648 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Slc6a1P31648 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Slc6a1P31648 Iws1-206ENSMUST00000212675 2936 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
Slc6a1P31648 Alx1-205ENSMUST00000218282 2012 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Slc6a1P31648 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Slc6a1P31648 Lipo3-201ENSMUST00000025694 2768 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Slc6a1P31648 Pycr1-201ENSMUST00000026133 1861 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Slc6a1P31648 Stk16-201ENSMUST00000027401 2876 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Slc6a1P31648 Rarg-201ENSMUST00000043172 2953 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
Slc6a1P31648 Lgi3-201ENSMUST00000047331 3174 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 38.4 ms