Protein–RNA interactions for Protein: P29595

Nedd8, NEDD8, mousemouse

Predictions only

Length 81 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nedd8P29595 Hnrnpm-202ENSMUST00000114385 2550 ntTSL 2 BASIC13.72□□□□□ -0.21
Nedd8P29595 Dnaaf1-201ENSMUST00000093100 2821 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Nedd8P29595 Gm14722-201ENSMUST00000118943 689 ntBASIC13.72□□□□□ -0.21
Nedd8P29595 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC13.72□□□□□ -0.21
Nedd8P29595 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Nedd8P29595 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC13.72□□□□□ -0.21
Nedd8P29595 Gm7556-201ENSMUST00000201178 1084 ntBASIC13.72□□□□□ -0.21
Nedd8P29595 Arhgef4-208ENSMUST00000211073 171 ntBASIC13.72□□□□□ -0.21
Nedd8P29595 AC114585.2-202ENSMUST00000228094 426 ntBASIC13.72□□□□□ -0.21
Nedd8P29595 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Nedd8P29595 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Nedd8P29595 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Nedd8P29595 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
Nedd8P29595 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC13.72□□□□□ -0.21
Nedd8P29595 Gm28230-201ENSMUST00000053932 3527 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Nedd8P29595 Rassf5-201ENSMUST00000027688 3485 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Nedd8P29595 Sphk2-201ENSMUST00000072836 2968 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Nedd8P29595 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Nedd8P29595 Col6a2-202ENSMUST00000105413 4653 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Nedd8P29595 Amz1-201ENSMUST00000060918 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Nedd8P29595 Adamts8-201ENSMUST00000068135 3631 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Nedd8P29595 Wapl-205ENSMUST00000169910 4066 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
Nedd8P29595 Slc25a25-204ENSMUST00000113308 2643 ntTSL 5 BASIC13.72□□□□□ -0.21
Nedd8P29595 Bhlhb9-204ENSMUST00000180025 2812 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
Nedd8P29595 Apbb1-215ENSMUST00000190369 1882 ntTSL 5 BASIC13.72□□□□□ -0.21
Nedd8P29595 Pycr1-201ENSMUST00000026133 1861 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Nedd8P29595 Scarb2-201ENSMUST00000031377 4698 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Nedd8P29595 Serinc5-201ENSMUST00000049488 5366 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Nedd8P29595 Krit1-211ENSMUST00000200386 2343 ntTSL 5 BASIC13.72□□□□□ -0.21
Nedd8P29595 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Nedd8P29595 Pxylp1-203ENSMUST00000119141 2768 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Nedd8P29595 Pax6-201ENSMUST00000090391 2869 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
Nedd8P29595 Gli2-201ENSMUST00000062483 6637 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Nedd8P29595 Syngr1-201ENSMUST00000009727 4180 ntAPPRIS P4 TSL 1 (best) BASIC13.71□□□□□ -0.21
Nedd8P29595 Dlgap1-202ENSMUST00000097288 2626 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Nedd8P29595 Nkain3-202ENSMUST00000119374 4567 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Nedd8P29595 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Nedd8P29595 Txnrd3-201ENSMUST00000000828 2836 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Nedd8P29595 Magi1-206ENSMUST00000203688 4969 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Nedd8P29595 Gcat-201ENSMUST00000006544 2365 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Nedd8P29595 Slc5a6-202ENSMUST00000114668 3436 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Nedd8P29595 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC13.71□□□□□ -0.21
Nedd8P29595 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC13.71□□□□□ -0.21
Nedd8P29595 AC122351.1-201ENSMUST00000220467 126 ntBASIC13.71□□□□□ -0.21
Nedd8P29595 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Nedd8P29595 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Nedd8P29595 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC13.71□□□□□ -0.21
Nedd8P29595 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Nedd8P29595 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Nedd8P29595 Ash2l-204ENSMUST00000110610 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Nedd8P29595 Gm42769-201ENSMUST00000198576 1659 ntBASIC13.71□□□□□ -0.21
Nedd8P29595 Cct6a-202ENSMUST00000201414 2454 ntTSL 5 BASIC13.71□□□□□ -0.21
Nedd8P29595 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Nedd8P29595 Hlcs-202ENSMUST00000163193 5371 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.22
Nedd8P29595 Myh7-201ENSMUST00000102803 6135 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Nedd8P29595 Nol9-201ENSMUST00000084116 3722 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.22
Nedd8P29595 Fam83e-201ENSMUST00000129507 2908 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Nedd8P29595 Stxbp2-207ENSMUST00000160708 2908 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Nedd8P29595 Irs1-201ENSMUST00000069799 9144 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Nedd8P29595 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Nedd8P29595 Tial1-203ENSMUST00000106228 2835 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Nedd8P29595 Rasd2-202ENSMUST00000139848 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Nedd8P29595 Rnpc3-202ENSMUST00000106535 2616 ntAPPRIS ALT1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Nedd8P29595 Nyap1-201ENSMUST00000061789 3912 ntAPPRIS P3 TSL 5 BASIC13.7□□□□□ -0.22
Nedd8P29595 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Nedd8P29595 Dkk1-201ENSMUST00000025803 2427 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Nedd8P29595 Nup98-206ENSMUST00000211235 3748 ntTSL 5 BASIC13.7□□□□□ -0.22
Nedd8P29595 Gm15850-201ENSMUST00000134998 2049 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Nedd8P29595 Cpne6-202ENSMUST00000163767 2004 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
Nedd8P29595 Gm13003-201ENSMUST00000151040 2904 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Nedd8P29595 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Nedd8P29595 Gm13474-201ENSMUST00000122466 815 ntBASIC13.7□□□□□ -0.22
Nedd8P29595 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Nedd8P29595 Gm26039-201ENSMUST00000158152 144 ntBASIC13.7□□□□□ -0.22
Nedd8P29595 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC13.7□□□□□ -0.22
Nedd8P29595 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Nedd8P29595 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC13.7□□□□□ -0.22
Nedd8P29595 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Nedd8P29595 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Nedd8P29595 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Nedd8P29595 Bmp3-202ENSMUST00000197143 2739 ntTSL 2 BASIC13.7□□□□□ -0.22
Nedd8P29595 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Nedd8P29595 Ssr1-204ENSMUST00000225319 1610 ntBASIC13.7□□□□□ -0.22
Nedd8P29595 Tmem251-201ENSMUST00000057416 3367 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Nedd8P29595 Acat2-201ENSMUST00000007005 2250 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Nedd8P29595 Grk6-207ENSMUST00000225925 2769 ntBASIC13.7□□□□□ -0.22
Nedd8P29595 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Nedd8P29595 Cndp2-202ENSMUST00000168419 2088 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Nedd8P29595 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Nedd8P29595 Pcyox1-201ENSMUST00000032065 4295 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Nedd8P29595 Grin2c-201ENSMUST00000003351 4279 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Nedd8P29595 Xrra1-201ENSMUST00000036155 2731 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Nedd8P29595 Steap2-203ENSMUST00000115425 4550 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Nedd8P29595 Catsper4-204ENSMUST00000169381 1506 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Nedd8P29595 Rufy3-203ENSMUST00000196894 3703 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Nedd8P29595 Hif1a-201ENSMUST00000021530 4724 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Nedd8P29595 Yipf6-201ENSMUST00000054697 5211 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Nedd8P29595 Dhrs3-206ENSMUST00000154208 2337 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Nedd8P29595 Vps35-201ENSMUST00000034131 3474 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Nedd8P29595 Tcf12-201ENSMUST00000034755 4621 ntAPPRIS ALT1 TSL 5 BASIC13.69□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 42.9 ms