Protein–RNA interactions for Protein: P28481

Col2a1, Collagen alpha-1(II) chain, mousemouse

Predictions only

Length 1,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col2a1P28481 S100b-201ENSMUST00000036387 1484 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Col2a1P28481 Tmem219-204ENSMUST00000121532 915 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Col2a1P28481 Ift27-201ENSMUST00000016781 1012 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Col2a1P28481 Gm28942-201ENSMUST00000186334 365 ntTSL 3 BASIC16.64■□□□□ 0.25
Col2a1P28481 Gm29542-201ENSMUST00000186876 704 ntTSL 3 BASIC16.64■□□□□ 0.25
Col2a1P28481 Gm42612-201ENSMUST00000197986 623 ntBASIC16.64■□□□□ 0.25
Col2a1P28481 Gm43170-201ENSMUST00000199827 612 ntBASIC16.64■□□□□ 0.25
Col2a1P28481 Gm30934-201ENSMUST00000215803 815 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Col2a1P28481 AC155729.1-201ENSMUST00000227758 544 ntBASIC16.64■□□□□ 0.25
Col2a1P28481 Cript-201ENSMUST00000024959 1184 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Col2a1P28481 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Col2a1P28481 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
Col2a1P28481 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Col2a1P28481 Pkp2-201ENSMUST00000039408 2918 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Col2a1P28481 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Col2a1P28481 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
Col2a1P28481 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Col2a1P28481 Aldh16a1-201ENSMUST00000107815 2685 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Col2a1P28481 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Col2a1P28481 Dusp23-201ENSMUST00000027826 1410 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Col2a1P28481 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Col2a1P28481 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Col2a1P28481 Pde7b-205ENSMUST00000169404 1697 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
Col2a1P28481 Gfpt1-203ENSMUST00000113657 1200 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Col2a1P28481 Nabp1-202ENSMUST00000185534 708 ntTSL 2 BASIC16.63■□□□□ 0.25
Col2a1P28481 Gm4559-201ENSMUST00000080669 600 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
Col2a1P28481 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Col2a1P28481 Hacd3-201ENSMUST00000036615 2709 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Col2a1P28481 Ccnh-204ENSMUST00000164127 1718 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Col2a1P28481 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Col2a1P28481 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Col2a1P28481 Gm4981-201ENSMUST00000099726 1854 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
Col2a1P28481 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Col2a1P28481 Gm13074-201ENSMUST00000124848 2735 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Col2a1P28481 Pid1-204ENSMUST00000176559 1564 ntTSL 2 BASIC16.63■□□□□ 0.25
Col2a1P28481 Echdc1-202ENSMUST00000160399 1845 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Col2a1P28481 Myg1-202ENSMUST00000113682 1480 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Col2a1P28481 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC16.62■□□□□ 0.25
Col2a1P28481 Myl4-203ENSMUST00000106957 943 ntAPPRIS P1 TSL 3 BASIC16.62■□□□□ 0.25
Col2a1P28481 Rph3al-203ENSMUST00000108420 695 ntTSL 3 BASIC16.62■□□□□ 0.25
Col2a1P28481 Gm15393-201ENSMUST00000120499 219 ntBASIC16.62■□□□□ 0.25
Col2a1P28481 Gm15491-201ENSMUST00000133963 751 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Col2a1P28481 1600025M17Rik-202ENSMUST00000151426 547 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Col2a1P28481 Gm36979-201ENSMUST00000193616 539 ntTSL 5 BASIC16.62■□□□□ 0.25
Col2a1P28481 Rps11-201ENSMUST00000003521 661 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Col2a1P28481 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Col2a1P28481 Gm10322-201ENSMUST00000095646 336 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
Col2a1P28481 Camk2g-217ENSMUST00000226630 1937 ntBASIC16.62■□□□□ 0.25
Col2a1P28481 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Col2a1P28481 Grik2-210ENSMUST00000220263 2085 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Col2a1P28481 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
Col2a1P28481 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC16.62■□□□□ 0.25
Col2a1P28481 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Col2a1P28481 Klhl26-204ENSMUST00000209567 2615 ntTSL 3 BASIC16.62■□□□□ 0.25
Col2a1P28481 Sept1-202ENSMUST00000106314 1486 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Col2a1P28481 Ldb3-207ENSMUST00000227819 1499 ntBASIC16.62■□□□□ 0.25
Col2a1P28481 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Col2a1P28481 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC16.62■□□□□ 0.25
Col2a1P28481 D130052B06Rik-201ENSMUST00000101371 2295 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Col2a1P28481 Eif2a-201ENSMUST00000029387 2299 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Col2a1P28481 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Col2a1P28481 Enpp6-202ENSMUST00000119686 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Col2a1P28481 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Col2a1P28481 AC174678.1-201ENSMUST00000228007 2749 ntBASIC16.61■□□□□ 0.25
Col2a1P28481 Ighv5-17-201ENSMUST00000103459 405 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
Col2a1P28481 Cmss1-201ENSMUST00000114371 930 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Col2a1P28481 3110053B16Rik-204ENSMUST00000145605 575 ntBASIC16.61■□□□□ 0.25
Col2a1P28481 Fam219aos-201ENSMUST00000151164 708 ntTSL 2 BASIC16.61■□□□□ 0.25
Col2a1P28481 Ighv1-25-201ENSMUST00000195638 345 ntBASIC16.61■□□□□ 0.25
Col2a1P28481 Gm35549-203ENSMUST00000204619 644 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
Col2a1P28481 Gm40193-201ENSMUST00000209971 237 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
Col2a1P28481 Gstm1-201ENSMUST00000004140 1289 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Col2a1P28481 Prss38-201ENSMUST00000061481 1243 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Col2a1P28481 Gm9949-201ENSMUST00000067743 962 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Col2a1P28481 Gm11149-201ENSMUST00000068730 1250 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Col2a1P28481 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Col2a1P28481 Lpcat2-201ENSMUST00000046290 2811 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Col2a1P28481 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Col2a1P28481 Zbtb14-201ENSMUST00000062369 3625 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Col2a1P28481 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Col2a1P28481 Pla2g2e-203ENSMUST00000105804 786 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Col2a1P28481 Rnd1-202ENSMUST00000109149 1034 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Col2a1P28481 Tnfrsf12a-202ENSMUST00000167059 858 ntTSL 2 BASIC16.61■□□□□ 0.25
Col2a1P28481 Gm10766-202ENSMUST00000194123 606 ntBASIC16.61■□□□□ 0.25
Col2a1P28481 Trib2-204ENSMUST00000221518 1192 ntTSL 5 BASIC16.61■□□□□ 0.25
Col2a1P28481 Tnfrsf12a-201ENSMUST00000024698 963 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Col2a1P28481 Pla2g2e-201ENSMUST00000030531 854 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Col2a1P28481 Gclc-201ENSMUST00000034905 3423 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Col2a1P28481 Ahcy-201ENSMUST00000054607 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Col2a1P28481 Ntng2-201ENSMUST00000048455 1770 ntAPPRIS P4 TSL 1 (best) BASIC16.6■□□□□ 0.25
Col2a1P28481 Espnl-202ENSMUST00000176156 2886 ntTSL 5 BASIC16.6■□□□□ 0.25
Col2a1P28481 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
Col2a1P28481 Ints8-203ENSMUST00000108319 3220 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Col2a1P28481 Gm26840-201ENSMUST00000180784 2980 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Col2a1P28481 Bscl2-201ENSMUST00000086058 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Col2a1P28481 Mars-201ENSMUST00000037290 2939 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Col2a1P28481 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Col2a1P28481 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC16.6■□□□□ 0.25
Col2a1P28481 Gm11424-201ENSMUST00000121929 829 ntBASIC16.6■□□□□ 0.25
Col2a1P28481 1700121C08Rik-201ENSMUST00000137546 677 ntTSL 3 BASIC16.6■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 32.5 ms