Protein–RNA interactions for Protein: P27784

Ccl6, C-C motif chemokine 6, mousemouse

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl6P27784 Trnt1-201ENSMUST00000057578 2283 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Ccl6P27784 Timp4-201ENSMUST00000032462 5496 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Ccl6P27784 Adrb3-203ENSMUST00000121838 1864 ntAPPRIS P2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Ccl6P27784 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Ccl6P27784 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Ccl6P27784 9330121J05Rik-201ENSMUST00000192267 3009 ntBASIC11.57□□□□□ -0.56
Ccl6P27784 Atp2b3-202ENSMUST00000088429 4483 ntAPPRIS P2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Ccl6P27784 Carmil3-201ENSMUST00000076236 4602 ntAPPRIS P1 TSL 2 BASIC11.56□□□□□ -0.56
Ccl6P27784 AU040320-201ENSMUST00000047431 4384 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Ccl6P27784 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC11.56□□□□□ -0.56
Ccl6P27784 Eif4g3-203ENSMUST00000084215 8134 ntAPPRIS ALT2 TSL 5 BASIC11.56□□□□□ -0.56
Ccl6P27784 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Ccl6P27784 Slc20a2-201ENSMUST00000067786 3566 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Ccl6P27784 Rnf217-201ENSMUST00000081989 11013 ntAPPRIS P1 TSL 5 BASIC11.56□□□□□ -0.56
Ccl6P27784 B3gnt7-201ENSMUST00000113306 2582 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Ccl6P27784 Nfe2l2-201ENSMUST00000102672 2475 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Ccl6P27784 Gm11764-201ENSMUST00000120221 623 ntBASIC11.56□□□□□ -0.56
Ccl6P27784 Egfl8-201ENSMUST00000015611 1150 ntAPPRIS P2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Ccl6P27784 Csrp3-202ENSMUST00000167786 899 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Ccl6P27784 Dhrs7c-205ENSMUST00000168612 1108 ntAPPRIS P1 TSL 5 BASIC11.56□□□□□ -0.56
Ccl6P27784 Mir5126-201ENSMUST00000175513 77 ntBASIC11.56□□□□□ -0.56
Ccl6P27784 Gm37335-201ENSMUST00000192656 447 ntTSL 5 BASIC11.56□□□□□ -0.56
Ccl6P27784 Gm9449-201ENSMUST00000207265 1011 ntBASIC11.56□□□□□ -0.56
Ccl6P27784 Gm18246-201ENSMUST00000221023 728 ntBASIC11.56□□□□□ -0.56
Ccl6P27784 Rps6ka5-209ENSMUST00000222731 5642 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Ccl6P27784 Gnptg-201ENSMUST00000038973 1234 ntAPPRIS P2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Ccl6P27784 Batf-201ENSMUST00000040536 955 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Ccl6P27784 Lpar1-201ENSMUST00000055018 3512 ntAPPRIS P3 TSL 1 (best) BASIC11.56□□□□□ -0.56
Ccl6P27784 Zfand3-201ENSMUST00000057897 2617 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Ccl6P27784 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Ccl6P27784 Egfl8-202ENSMUST00000097345 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Ccl6P27784 Phka1-204ENSMUST00000119229 6025 ntAPPRIS ALT2 TSL 5 BASIC11.56□□□□□ -0.56
Ccl6P27784 Gm26850-201ENSMUST00000181653 2669 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Ccl6P27784 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Ccl6P27784 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Ccl6P27784 Pde4a-202ENSMUST00000039413 4653 ntAPPRIS P3 TSL 1 (best) BASIC11.56□□□□□ -0.56
Ccl6P27784 Smo-201ENSMUST00000001812 3779 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Ccl6P27784 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC11.56□□□□□ -0.56
Ccl6P27784 Gm17108-201ENSMUST00000168625 2877 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Ccl6P27784 Col7a1-201ENSMUST00000026740 9198 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Ccl6P27784 Lrp11-201ENSMUST00000019931 3386 ntAPPRIS P2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Ccl6P27784 Rnf150-201ENSMUST00000078525 9682 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Ccl6P27784 Fbrs-202ENSMUST00000205432 4166 ntAPPRIS ALT2 TSL 5 BASIC11.56□□□□□ -0.56
Ccl6P27784 Ptdss1-201ENSMUST00000021990 3424 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Ccl6P27784 AC154527.4-201ENSMUST00000224364 1667 ntBASIC11.55□□□□□ -0.56
Ccl6P27784 AC130669.1-201ENSMUST00000228537 1672 ntBASIC11.55□□□□□ -0.56
Ccl6P27784 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Ccl6P27784 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC11.55□□□□□ -0.56
Ccl6P27784 Lpcat2-201ENSMUST00000046290 2811 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Ccl6P27784 Nptn-201ENSMUST00000085651 2024 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Ccl6P27784 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Ccl6P27784 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC11.55□□□□□ -0.56
Ccl6P27784 Klhl26-202ENSMUST00000166976 2734 ntTSL 2 BASIC11.55□□□□□ -0.56
Ccl6P27784 Clip2-201ENSMUST00000036999 4893 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Ccl6P27784 Dlg4-201ENSMUST00000018700 3204 ntAPPRIS P3 TSL 1 (best) BASIC11.55□□□□□ -0.56
Ccl6P27784 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Ccl6P27784 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Ccl6P27784 Tbc1d22b-201ENSMUST00000048677 3592 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Ccl6P27784 Gm42632-201ENSMUST00000201707 2411 ntBASIC11.55□□□□□ -0.56
Ccl6P27784 Synm-204ENSMUST00000208231 4457 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Ccl6P27784 0610010K14Rik-204ENSMUST00000102569 778 ntAPPRIS P3 TSL 1 (best) BASIC11.55□□□□□ -0.56
Ccl6P27784 Rplp2-203ENSMUST00000106004 421 ntAPPRIS P1 TSL 2 BASIC11.55□□□□□ -0.56
Ccl6P27784 Wdr61-203ENSMUST00000121204 1290 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Ccl6P27784 Gm12350-201ENSMUST00000121208 462 ntBASIC11.55□□□□□ -0.56
Ccl6P27784 A930006K02Rik-201ENSMUST00000149172 776 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Ccl6P27784 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Ccl6P27784 Hrh3-204ENSMUST00000165248 1224 ntAPPRIS ALT2 TSL 5 BASIC11.55□□□□□ -0.56
Ccl6P27784 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Ccl6P27784 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC11.55□□□□□ -0.56
Ccl6P27784 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC11.55□□□□□ -0.56
Ccl6P27784 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC11.55□□□□□ -0.56
Ccl6P27784 4930519L02Rik-201ENSMUST00000197683 619 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Ccl6P27784 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Ccl6P27784 Pih1d1-206ENSMUST00000210139 1077 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Ccl6P27784 Gm2270-201ENSMUST00000222858 797 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Ccl6P27784 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Ccl6P27784 Cmtm8-201ENSMUST00000047013 1064 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Ccl6P27784 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Ccl6P27784 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Ccl6P27784 Gtf2b-201ENSMUST00000029938 1455 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Ccl6P27784 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Ccl6P27784 Kif5c-201ENSMUST00000028102 6856 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Ccl6P27784 Papd5-203ENSMUST00000119033 4624 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Ccl6P27784 Elfn2-201ENSMUST00000088592 4846 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Ccl6P27784 Gpr160-207ENSMUST00000166278 1689 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Ccl6P27784 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC11.55□□□□□ -0.56
Ccl6P27784 Zbed4-201ENSMUST00000041297 5425 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Ccl6P27784 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Ccl6P27784 Bsx-201ENSMUST00000067375 2960 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Ccl6P27784 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Ccl6P27784 Satb2-201ENSMUST00000042857 6277 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Ccl6P27784 Canx-205ENSMUST00000179865 4281 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Ccl6P27784 Parg-202ENSMUST00000163350 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Ccl6P27784 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Ccl6P27784 Eomes-201ENSMUST00000035020 3560 ntAPPRIS P3 TSL 1 (best) BASIC11.54□□□□□ -0.56
Ccl6P27784 Dstyk-204ENSMUST00000188389 3232 ntTSL 5 BASIC11.54□□□□□ -0.56
Ccl6P27784 Gpr155-202ENSMUST00000076463 5061 ntAPPRIS P3 TSL 1 (best) BASIC11.54□□□□□ -0.56
Ccl6P27784 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC11.54□□□□□ -0.56
Ccl6P27784 Lancl3-201ENSMUST00000069763 3991 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Ccl6P27784 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 29.2 ms