Protein–RNA interactions for Protein: P27548

Cd40lg, CD40 ligand, mousemouse

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd40lgP27548 Pgbd5-201ENSMUST00000052580 2824 ntAPPRIS P2 TSL 5 BASIC13.69□□□□□ -0.22
Cd40lgP27548 Plcb2-202ENSMUST00000102524 5145 ntAPPRIS P3 TSL 2 BASIC13.69□□□□□ -0.22
Cd40lgP27548 Tcf12-202ENSMUST00000183404 6299 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cd40lgP27548 Tor1aip1-201ENSMUST00000027738 1952 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cd40lgP27548 Traf5-201ENSMUST00000085573 1964 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Cd40lgP27548 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cd40lgP27548 H2-T23-201ENSMUST00000102678 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cd40lgP27548 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Cd40lgP27548 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
Cd40lgP27548 Hells-201ENSMUST00000025965 5868 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cd40lgP27548 Sbno2-209ENSMUST00000219260 4850 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Cd40lgP27548 Mus81-202ENSMUST00000124334 2067 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cd40lgP27548 Sfxn5-203ENSMUST00000113787 638 ntTSL 2 BASIC13.69□□□□□ -0.22
Cd40lgP27548 Uqcc2-203ENSMUST00000119227 452 ntTSL 3 BASIC13.69□□□□□ -0.22
Cd40lgP27548 Gm11906-201ENSMUST00000124792 680 ntTSL 5 BASIC13.69□□□□□ -0.22
Cd40lgP27548 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Cd40lgP27548 Rac3-201ENSMUST00000018156 1076 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cd40lgP27548 Gm27525-201ENSMUST00000184465 107 ntBASIC13.69□□□□□ -0.22
Cd40lgP27548 Gm5712-201ENSMUST00000199748 1043 ntBASIC13.69□□□□□ -0.22
Cd40lgP27548 Gm42802-201ENSMUST00000202475 456 ntTSL 2 BASIC13.69□□□□□ -0.22
Cd40lgP27548 Fmr1nb-201ENSMUST00000069731 799 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cd40lgP27548 Vwa8-201ENSMUST00000040990 7054 ntAPPRIS P2 TSL 5 BASIC13.69□□□□□ -0.22
Cd40lgP27548 Itgb3-201ENSMUST00000021028 5784 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cd40lgP27548 Cacna1g-207ENSMUST00000107789 8383 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
Cd40lgP27548 Anks1b-231ENSMUST00000183136 2786 ntTSL 5 BASIC13.69□□□□□ -0.22
Cd40lgP27548 Myh3-201ENSMUST00000007301 5992 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Cd40lgP27548 AC131586.3-201ENSMUST00000228355 1367 ntBASIC13.69□□□□□ -0.22
Cd40lgP27548 Acin1-201ENSMUST00000022793 4735 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cd40lgP27548 Rrp1b-201ENSMUST00000081339 4874 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cd40lgP27548 Ccdc166-201ENSMUST00000182172 2584 ntBASIC13.69□□□□□ -0.22
Cd40lgP27548 Acss1-201ENSMUST00000028944 3618 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cd40lgP27548 Slc4a2-201ENSMUST00000080067 4179 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cd40lgP27548 Foxl2-201ENSMUST00000051312 3256 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
Cd40lgP27548 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cd40lgP27548 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cd40lgP27548 Gadd45gip1-201ENSMUST00000036734 2494 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cd40lgP27548 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cd40lgP27548 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cd40lgP27548 Ubc-203ENSMUST00000156249 2581 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
Cd40lgP27548 Enoph1-201ENSMUST00000031268 1420 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cd40lgP27548 Myh3-203ENSMUST00000165221 5994 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Cd40lgP27548 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cd40lgP27548 Dnajc24-201ENSMUST00000102555 1197 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cd40lgP27548 Tmem217-201ENSMUST00000114683 904 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cd40lgP27548 Meig1-203ENSMUST00000115082 603 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cd40lgP27548 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cd40lgP27548 Gm10499-201ENSMUST00000174094 934 ntBASIC13.68□□□□□ -0.22
Cd40lgP27548 Nptn-211ENSMUST00000177064 582 ntTSL 5 BASIC13.68□□□□□ -0.22
Cd40lgP27548 Gm27300-201ENSMUST00000184085 97 ntBASIC13.68□□□□□ -0.22
Cd40lgP27548 Gm27335-201ENSMUST00000184758 97 ntBASIC13.68□□□□□ -0.22
Cd40lgP27548 Mir8117-201ENSMUST00000184773 107 ntBASIC13.68□□□□□ -0.22
Cd40lgP27548 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Cd40lgP27548 Ndufv2-201ENSMUST00000024909 927 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Cd40lgP27548 Cmtm8-201ENSMUST00000047013 1064 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cd40lgP27548 Tox3-201ENSMUST00000109621 3356 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cd40lgP27548 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cd40lgP27548 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cd40lgP27548 Evc-201ENSMUST00000031005 4325 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cd40lgP27548 Ttll5-203ENSMUST00000095536 4150 ntAPPRIS ALT2 TSL 2 BASIC13.68□□□□□ -0.22
Cd40lgP27548 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cd40lgP27548 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Cd40lgP27548 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC13.68□□□□□ -0.22
Cd40lgP27548 Dok2-201ENSMUST00000022698 1795 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cd40lgP27548 Zfp444-204ENSMUST00000108567 5104 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cd40lgP27548 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cd40lgP27548 Washc1-201ENSMUST00000072383 2904 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cd40lgP27548 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cd40lgP27548 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cd40lgP27548 Mdp1-201ENSMUST00000002400 1733 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cd40lgP27548 Phb2-201ENSMUST00000004375 1318 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Cd40lgP27548 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cd40lgP27548 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
Cd40lgP27548 Gm7901-201ENSMUST00000120430 1597 ntBASIC13.67□□□□□ -0.22
Cd40lgP27548 Serpinf1-201ENSMUST00000000769 1832 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cd40lgP27548 Taf2-201ENSMUST00000041733 5031 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cd40lgP27548 Cuedc2-202ENSMUST00000167861 1941 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Cd40lgP27548 Aimp2-202ENSMUST00000100483 1073 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Cd40lgP27548 Mdk-204ENSMUST00000111309 771 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
Cd40lgP27548 Zglp1-201ENSMUST00000115494 1010 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cd40lgP27548 Gm11779-201ENSMUST00000118541 368 ntBASIC13.67□□□□□ -0.22
Cd40lgP27548 Gm28308-201ENSMUST00000128102 752 ntAPPRIS P1 TSL 3 BASIC13.67□□□□□ -0.22
Cd40lgP27548 Gm16156-201ENSMUST00000141168 713 ntTSL 3 BASIC13.67□□□□□ -0.22
Cd40lgP27548 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC13.67□□□□□ -0.22
Cd40lgP27548 Mymx-202ENSMUST00000169137 616 ntAPPRIS P4 TSL 2 BASIC13.67□□□□□ -0.22
Cd40lgP27548 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Cd40lgP27548 1700030N18Rik-201ENSMUST00000202497 966 ntBASIC13.67□□□□□ -0.22
Cd40lgP27548 5033428I22Rik-203ENSMUST00000210614 952 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Cd40lgP27548 Gm18246-201ENSMUST00000221023 728 ntBASIC13.67□□□□□ -0.22
Cd40lgP27548 Aimp2-201ENSMUST00000031613 1185 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cd40lgP27548 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cd40lgP27548 Cxcl10-202ENSMUST00000118006 1353 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Cd40lgP27548 Klhdc8b-207ENSMUST00000193286 2956 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cd40lgP27548 Ehbp1l1-201ENSMUST00000049295 6404 ntAPPRIS P4 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cd40lgP27548 App-207ENSMUST00000227737 2827 ntBASIC13.67□□□□□ -0.22
Cd40lgP27548 Dnajc7-201ENSMUST00000014339 2330 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cd40lgP27548 Tmem198b-201ENSMUST00000051011 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cd40lgP27548 Mtdh-201ENSMUST00000022865 6919 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cd40lgP27548 Rbm26-201ENSMUST00000022715 3633 ntTSL 5 BASIC13.66□□□□□ -0.22
Cd40lgP27548 Atp2a3-201ENSMUST00000021142 4593 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cd40lgP27548 Dlg1-201ENSMUST00000023454 3725 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 27.3 ms