Protein–RNA interactions for Protein: P22518

Clk1, Dual specificity protein kinase CLK1, mousemouse

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clk1P22518 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Clk1P22518 Rsbn1l-201ENSMUST00000036489 5550 ntAPPRIS P2 TSL 5 BASIC13.84□□□□□ -0.19
Clk1P22518 Cuedc2-202ENSMUST00000167861 1941 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
Clk1P22518 Itga8-201ENSMUST00000028106 5812 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Clk1P22518 Radil-201ENSMUST00000063635 3700 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
Clk1P22518 Nap1l1-206ENSMUST00000219143 1365 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
Clk1P22518 Ankrd33b-204ENSMUST00000123325 7466 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.19
Clk1P22518 Efcab14-204ENSMUST00000106525 2792 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.19
Clk1P22518 Ralgapb-203ENSMUST00000109486 8383 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.19
Clk1P22518 Pde4dip-202ENSMUST00000090750 8376 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.19
Clk1P22518 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Clk1P22518 Zfp865-201ENSMUST00000076251 7503 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Clk1P22518 Gemin5-202ENSMUST00000102711 4919 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
Clk1P22518 Spock3-203ENSMUST00000118003 2860 ntAPPRIS P3 TSL 5 BASIC13.83□□□□□ -0.2
Clk1P22518 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Clk1P22518 Cdk5rap3-201ENSMUST00000103152 2250 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Clk1P22518 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Clk1P22518 Dip2b-202ENSMUST00000100203 8914 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Clk1P22518 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Clk1P22518 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Clk1P22518 Cgrrf1-204ENSMUST00000140114 419 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Clk1P22518 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Clk1P22518 Kcnk16-201ENSMUST00000024155 916 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
Clk1P22518 Gnptg-201ENSMUST00000038973 1234 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Clk1P22518 Klk14-201ENSMUST00000056329 1271 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Clk1P22518 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
Clk1P22518 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
Clk1P22518 Gm19461-205ENSMUST00000191207 2566 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Clk1P22518 Dennd4c-201ENSMUST00000045512 5648 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
Clk1P22518 Bahd1-201ENSMUST00000036578 4594 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Clk1P22518 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
Clk1P22518 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Clk1P22518 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Clk1P22518 D6Ertd527e-204ENSMUST00000204927 2218 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
Clk1P22518 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Clk1P22518 Btbd3-202ENSMUST00000091556 4657 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Clk1P22518 Gm28551-201ENSMUST00000144660 3142 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Clk1P22518 Map3k5-202ENSMUST00000120259 4289 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Clk1P22518 Cacna2d1-205ENSMUST00000167946 7436 ntAPPRIS ALT1 TSL 5 BASIC13.83□□□□□ -0.2
Clk1P22518 Gm5049-201ENSMUST00000195878 1590 ntBASIC13.83□□□□□ -0.2
Clk1P22518 Fgd4-211ENSMUST00000162671 2714 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Clk1P22518 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Clk1P22518 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Clk1P22518 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Clk1P22518 Mex3c-201ENSMUST00000091852 3738 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Clk1P22518 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Clk1P22518 Pcdha11-202ENSMUST00000115657 5360 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Clk1P22518 BC003331-205ENSMUST00000111913 3273 ntAPPRIS P3 TSL 5 BASIC13.82□□□□□ -0.2
Clk1P22518 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Clk1P22518 Cyth4-201ENSMUST00000043069 2791 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Clk1P22518 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Clk1P22518 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC13.82□□□□□ -0.2
Clk1P22518 Mir5126-201ENSMUST00000175513 77 ntBASIC13.82□□□□□ -0.2
Clk1P22518 Dusp13-208ENSMUST00000183698 1019 ntTSL 5 BASIC13.82□□□□□ -0.2
Clk1P22518 Pih1d1-206ENSMUST00000210139 1077 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Clk1P22518 Pspn-201ENSMUST00000002740 474 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Clk1P22518 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Clk1P22518 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Clk1P22518 Tbc1d4-209ENSMUST00000161991 6483 ntAPPRIS P2 TSL 5 BASIC13.82□□□□□ -0.2
Clk1P22518 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Clk1P22518 Zkscan4-201ENSMUST00000062609 2400 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
Clk1P22518 BC048403-202ENSMUST00000136432 2968 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Clk1P22518 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Clk1P22518 Ywhab-201ENSMUST00000018470 3013 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Clk1P22518 Otx1-201ENSMUST00000006071 2789 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Clk1P22518 Klf15-204ENSMUST00000203607 2240 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Clk1P22518 Col18a1-201ENSMUST00000072755 5595 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Clk1P22518 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Clk1P22518 Trib1-202ENSMUST00000118228 3081 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Clk1P22518 Adamts15-201ENSMUST00000065112 5928 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Clk1P22518 Edem3-202ENSMUST00000187951 3115 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Clk1P22518 BC005537-201ENSMUST00000019276 5849 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Clk1P22518 Laptm5-207ENSMUST00000151698 2600 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Clk1P22518 Pitpnb-204ENSMUST00000200298 2632 ntAPPRIS ALT1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Clk1P22518 Gldn-201ENSMUST00000056740 4658 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Clk1P22518 Sde2-201ENSMUST00000038091 3213 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Clk1P22518 4933433G15Rik-201ENSMUST00000180533 1481 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Clk1P22518 Tmem9b-202ENSMUST00000118571 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Clk1P22518 Gm45293-201ENSMUST00000209754 1812 ntBASIC13.81□□□□□ -0.2
Clk1P22518 Proser3-206ENSMUST00000215288 2465 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Clk1P22518 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Clk1P22518 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Clk1P22518 Asb16-201ENSMUST00000036467 2843 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Clk1P22518 Anxa3-201ENSMUST00000031447 1595 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Clk1P22518 Ttc9c-201ENSMUST00000088092 1585 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Clk1P22518 Gm13036-201ENSMUST00000117799 748 ntBASIC13.81□□□□□ -0.2
Clk1P22518 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Clk1P22518 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Clk1P22518 Gm20496-202ENSMUST00000173770 523 ntTSL 5 BASIC13.81□□□□□ -0.2
Clk1P22518 Gm18733-201ENSMUST00000173950 856 ntBASIC13.81□□□□□ -0.2
Clk1P22518 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Clk1P22518 Bag2-203ENSMUST00000187602 378 ntTSL 2 BASIC13.81□□□□□ -0.2
Clk1P22518 AC084391.1-201ENSMUST00000200651 141 ntBASIC13.81□□□□□ -0.2
Clk1P22518 Tmem270-202ENSMUST00000201316 847 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Clk1P22518 CT009510.1-201ENSMUST00000227972 270 ntBASIC13.81□□□□□ -0.2
Clk1P22518 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Clk1P22518 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
Clk1P22518 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC13.81□□□□□ -0.2
Clk1P22518 Gucd1-201ENSMUST00000039796 3500 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Clk1P22518 Map6-203ENSMUST00000122101 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 23.7 ms