Protein–RNA interactions for Protein: P18111

Cdx1, Homeobox protein CDX-1, mousemouse

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx1P18111 Chaf1a-201ENSMUST00000002914 3308 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Cdx1P18111 Tinf2-205ENSMUST00000227842 2001 ntAPPRIS ALT2 BASIC11.99□□□□□ -0.49
Cdx1P18111 Slc45a1-201ENSMUST00000037827 3387 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Cdx1P18111 Cep164-204ENSMUST00000213154 6105 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
Cdx1P18111 Nat6-201ENSMUST00000093785 2053 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Cdx1P18111 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Cdx1P18111 C130012C08Rik-201ENSMUST00000194287 3665 ntBASIC11.99□□□□□ -0.49
Cdx1P18111 Spock2-201ENSMUST00000121820 5238 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Cdx1P18111 Kcnk6-201ENSMUST00000085818 4084 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Cdx1P18111 Adam22-203ENSMUST00000088744 9245 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
Cdx1P18111 Wdr90-201ENSMUST00000079461 5991 ntAPPRIS P2 TSL 5 BASIC11.99□□□□□ -0.49
Cdx1P18111 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Cdx1P18111 B3gnt7-201ENSMUST00000113306 2582 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Cdx1P18111 Fkbp10-201ENSMUST00000001595 2584 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Cdx1P18111 Trp53bp2-201ENSMUST00000117245 4361 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
Cdx1P18111 Mob1b-201ENSMUST00000006424 2705 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Cdx1P18111 Kmt5c-202ENSMUST00000108582 2774 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Cdx1P18111 Gm6198-201ENSMUST00000191337 2929 ntBASIC11.99□□□□□ -0.49
Cdx1P18111 Nphp4-202ENSMUST00000081393 5027 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Cdx1P18111 P2ry2-201ENSMUST00000037540 3011 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Cdx1P18111 Pde1c-209ENSMUST00000203372 3147 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
Cdx1P18111 Trim32-201ENSMUST00000050850 3194 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Cdx1P18111 Adamts8-201ENSMUST00000068135 3631 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Cdx1P18111 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC11.99□□□□□ -0.49
Cdx1P18111 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC11.99□□□□□ -0.49
Cdx1P18111 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC11.99□□□□□ -0.49
Cdx1P18111 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Cdx1P18111 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC11.99□□□□□ -0.49
Cdx1P18111 March8-213ENSMUST00000203193 4245 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Cdx1P18111 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC11.99□□□□□ -0.49
Cdx1P18111 Tbc1d5-205ENSMUST00000224528 4764 ntAPPRIS ALT2 BASIC11.99□□□□□ -0.49
Cdx1P18111 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC11.99□□□□□ -0.49
Cdx1P18111 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC11.99□□□□□ -0.49
Cdx1P18111 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Cdx1P18111 Il2rb-202ENSMUST00000163494 1894 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Cdx1P18111 Gm42471-201ENSMUST00000201457 1865 ntBASIC11.99□□□□□ -0.49
Cdx1P18111 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Cdx1P18111 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Cdx1P18111 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Cdx1P18111 Myh14-201ENSMUST00000048102 6457 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Cdx1P18111 Endou-202ENSMUST00000100249 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Cdx1P18111 Endou-201ENSMUST00000023105 2404 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
Cdx1P18111 Gspt2-201ENSMUST00000096368 2491 ntAPPRIS P1 BASIC11.99□□□□□ -0.49
Cdx1P18111 Gsdme-201ENSMUST00000031845 2502 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Cdx1P18111 Sema3b-205ENSMUST00000102532 3191 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Cdx1P18111 Map7d1-202ENSMUST00000106132 3195 ntAPPRIS ALT2 TSL 2 BASIC11.99□□□□□ -0.49
Cdx1P18111 Gng4-201ENSMUST00000021734 3179 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Cdx1P18111 Slc6a8-203ENSMUST00000114465 3314 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Cdx1P18111 Ncam2-201ENSMUST00000037785 4893 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
Cdx1P18111 Znrf1-203ENSMUST00000168428 4451 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Cdx1P18111 Ttll5-203ENSMUST00000095536 4150 ntAPPRIS ALT2 TSL 2 BASIC11.98□□□□□ -0.49
Cdx1P18111 Opa1-201ENSMUST00000038867 3230 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Cdx1P18111 Kif21b-201ENSMUST00000075164 9115 ntAPPRIS P1 TSL 2 BASIC11.98□□□□□ -0.49
Cdx1P18111 9330121J05Rik-201ENSMUST00000192267 3009 ntBASIC11.98□□□□□ -0.49
Cdx1P18111 Clec16a-205ENSMUST00000115827 2949 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Cdx1P18111 Efcab14-204ENSMUST00000106525 2792 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Cdx1P18111 Gm28182-201ENSMUST00000188354 2477 ntBASIC11.98□□□□□ -0.49
Cdx1P18111 Prkca-202ENSMUST00000100302 2265 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Cdx1P18111 Hdgfl2-210ENSMUST00000225843 2238 ntAPPRIS ALT2 BASIC11.98□□□□□ -0.49
Cdx1P18111 Arhgef25-202ENSMUST00000167353 2189 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Cdx1P18111 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Cdx1P18111 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Cdx1P18111 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Cdx1P18111 Plch2-208ENSMUST00000145662 1818 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Cdx1P18111 Csnk1g2-202ENSMUST00000085435 1825 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Cdx1P18111 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Cdx1P18111 Uimc1-202ENSMUST00000099496 1678 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Cdx1P18111 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC11.98□□□□□ -0.49
Cdx1P18111 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Cdx1P18111 Uqcc2-203ENSMUST00000119227 452 ntTSL 3 BASIC11.98□□□□□ -0.49
Cdx1P18111 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Cdx1P18111 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC11.98□□□□□ -0.49
Cdx1P18111 Hrh3-204ENSMUST00000165248 1224 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
Cdx1P18111 Gm29707-201ENSMUST00000196325 491 ntBASIC11.98□□□□□ -0.49
Cdx1P18111 Gm5864-201ENSMUST00000202263 970 ntBASIC11.98□□□□□ -0.49
Cdx1P18111 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Cdx1P18111 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Cdx1P18111 Acbd5-215ENSMUST00000228050 4804 ntAPPRIS ALT2 BASIC11.98□□□□□ -0.49
Cdx1P18111 Pctp-201ENSMUST00000020864 2723 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Cdx1P18111 Atp2b3-202ENSMUST00000088429 4483 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Cdx1P18111 Apc-202ENSMUST00000079362 8867 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Cdx1P18111 Rab9b-201ENSMUST00000058814 3980 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Cdx1P18111 Gars-201ENSMUST00000003572 2380 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Cdx1P18111 Synj1-203ENSMUST00000121759 7090 ntAPPRIS P4 TSL 5 BASIC11.98□□□□□ -0.49
Cdx1P18111 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Cdx1P18111 Cnnm2-202ENSMUST00000099373 3558 ntAPPRIS P4 TSL 1 (best) BASIC11.98□□□□□ -0.49
Cdx1P18111 Rnf123-201ENSMUST00000047746 4722 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
Cdx1P18111 Abi2-201ENSMUST00000052332 5768 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Cdx1P18111 Kcnq2-202ENSMUST00000049792 2920 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Cdx1P18111 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
Cdx1P18111 Cep19-202ENSMUST00000115168 1718 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Cdx1P18111 Gm26534-201ENSMUST00000181687 1724 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Cdx1P18111 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Cdx1P18111 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Cdx1P18111 Abcg4-208ENSMUST00000161354 3999 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Cdx1P18111 Pqlc2-202ENSMUST00000105801 2756 ntAPPRIS ALT2 TSL 2 BASIC11.97□□□□□ -0.49
Cdx1P18111 Slc52a3-201ENSMUST00000073228 2669 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Cdx1P18111 Ate1-201ENSMUST00000033139 4735 ntAPPRIS P4 TSL 1 (best) BASIC11.97□□□□□ -0.49
Cdx1P18111 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Cdx1P18111 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 29 ms