Protein–RNA interactions for Protein: P15975

Usp53, Inactive ubiquitin carboxyl-terminal hydrolase 53, mousemouse

Predictions only

Length 1,069 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp53P15975 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Usp53P15975 Snx8-205ENSMUST00000196566 1914 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
Usp53P15975 Gm13464-201ENSMUST00000119418 935 ntBASIC17.14■□□□□ 0.33
Usp53P15975 Nespas-202ENSMUST00000150276 1262 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Usp53P15975 Arpp19-210ENSMUST00000170308 429 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
Usp53P15975 Gm18737-201ENSMUST00000173594 937 ntBASIC17.14■□□□□ 0.33
Usp53P15975 Cdk2ap2-204ENSMUST00000174514 669 ntTSL 2 BASIC17.14■□□□□ 0.33
Usp53P15975 Gm26771-201ENSMUST00000180472 1082 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Usp53P15975 Gm44872-201ENSMUST00000207864 420 ntBASIC17.14■□□□□ 0.33
Usp53P15975 Commd9-201ENSMUST00000028584 1191 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Usp53P15975 Gm5771-201ENSMUST00000049079 798 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Usp53P15975 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Usp53P15975 Cyp2a5-201ENSMUST00000005685 2013 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Usp53P15975 Phyhd1-204ENSMUST00000113645 1325 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Usp53P15975 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Usp53P15975 Siglece-201ENSMUST00000032667 1849 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Usp53P15975 Fstl1-201ENSMUST00000114763 3789 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Usp53P15975 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Usp53P15975 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC17.14■□□□□ 0.33
Usp53P15975 Ndst2-202ENSMUST00000223679 3907 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
Usp53P15975 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Usp53P15975 Pdk1-201ENSMUST00000006669 5185 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Usp53P15975 Zfp316-201ENSMUST00000051665 3054 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Usp53P15975 Sftpb-204ENSMUST00000183018 1490 ntAPPRIS P2 TSL 5 BASIC17.13■□□□□ 0.33
Usp53P15975 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Usp53P15975 Men1-203ENSMUST00000079327 2639 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Usp53P15975 Rhcg-201ENSMUST00000032766 2090 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Usp53P15975 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Usp53P15975 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Usp53P15975 Abl1-201ENSMUST00000028190 5794 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Usp53P15975 Adprm-201ENSMUST00000116363 1283 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Usp53P15975 Trav13-3-201ENSMUST00000117226 336 ntBASIC17.13■□□□□ 0.33
Usp53P15975 1700021F05Rik-202ENSMUST00000147196 860 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Usp53P15975 Gm5479-201ENSMUST00000160578 435 ntBASIC17.13■□□□□ 0.33
Usp53P15975 Gm26517-201ENSMUST00000181279 1172 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Usp53P15975 Gm29541-201ENSMUST00000191351 678 ntBASIC17.13■□□□□ 0.33
Usp53P15975 Gm38294-201ENSMUST00000192831 381 ntBASIC17.13■□□□□ 0.33
Usp53P15975 AC159114.1-201ENSMUST00000220349 266 ntBASIC17.13■□□□□ 0.33
Usp53P15975 AC124732.2-201ENSMUST00000221977 316 ntBASIC17.13■□□□□ 0.33
Usp53P15975 G430095P16Rik-201ENSMUST00000098571 721 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Usp53P15975 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC17.13■□□□□ 0.33
Usp53P15975 AC174678.1-201ENSMUST00000228007 2749 ntBASIC17.13■□□□□ 0.33
Usp53P15975 Tpm3-202ENSMUST00000118566 2190 ntTSL 5 BASIC17.13■□□□□ 0.33
Usp53P15975 Lman2l-204ENSMUST00000125304 3378 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Usp53P15975 Efs-202ENSMUST00000227037 2540 ntBASIC17.13■□□□□ 0.33
Usp53P15975 B230219D22Rik-201ENSMUST00000057844 4652 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Usp53P15975 Tcf25-205ENSMUST00000212470 2572 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Usp53P15975 Tmem5-205ENSMUST00000140299 4793 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Usp53P15975 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Usp53P15975 Map3k14-201ENSMUST00000021324 4246 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Usp53P15975 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Usp53P15975 2810408A11Rik-202ENSMUST00000100969 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Usp53P15975 St3gal3-202ENSMUST00000097912 2143 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Usp53P15975 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Usp53P15975 Rnf207-201ENSMUST00000076183 2466 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Usp53P15975 Map3k12-207ENSMUST00000169377 4210 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Usp53P15975 Gm42893-201ENSMUST00000198035 1502 ntTSL 3 BASIC17.12■□□□□ 0.33
Usp53P15975 Hnrnpa2b1-210ENSMUST00000204188 1518 ntTSL 5 BASIC17.12■□□□□ 0.33
Usp53P15975 Cyp2t4-201ENSMUST00000108385 1599 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Usp53P15975 Fbxl8-201ENSMUST00000036221 1901 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Usp53P15975 Pik3ap1-201ENSMUST00000059672 2615 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Usp53P15975 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Usp53P15975 Sept1-201ENSMUST00000106313 1285 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Usp53P15975 Tctn3-202ENSMUST00000132452 1271 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Usp53P15975 Nup188-205ENSMUST00000138666 534 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Usp53P15975 Gm13883-202ENSMUST00000151310 1156 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Usp53P15975 Styxl1-207ENSMUST00000177559 1236 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Usp53P15975 4930573H18Rik-201ENSMUST00000197696 906 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Usp53P15975 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC17.12■□□□□ 0.33
Usp53P15975 Gm32351-201ENSMUST00000220503 438 ntTSL 5 BASIC17.12■□□□□ 0.33
Usp53P15975 Lce1g-201ENSMUST00000029527 925 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Usp53P15975 Mbp-204ENSMUST00000080658 2063 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Usp53P15975 Prss22-201ENSMUST00000041649 1323 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Usp53P15975 Fbxo31-201ENSMUST00000059018 4358 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Usp53P15975 Aldh3a1-201ENSMUST00000019246 1729 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Usp53P15975 Rasgef1c-202ENSMUST00000093141 2120 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Usp53P15975 Fbxl19-201ENSMUST00000033081 3410 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Usp53P15975 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Usp53P15975 4930459C07Rik-202ENSMUST00000219638 1805 ntTSL 5 BASIC17.12■□□□□ 0.33
Usp53P15975 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Usp53P15975 Cldn14-204ENSMUST00000169391 1456 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
Usp53P15975 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Usp53P15975 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Usp53P15975 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Usp53P15975 Tmod2-207ENSMUST00000215462 1564 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Usp53P15975 Fbxo25-201ENSMUST00000043520 2012 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Usp53P15975 Slc39a4-201ENSMUST00000073428 2224 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Usp53P15975 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Usp53P15975 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC17.11■□□□□ 0.33
Usp53P15975 Abhd11-202ENSMUST00000111216 972 ntTSL 3 BASIC17.11■□□□□ 0.33
Usp53P15975 Gm6415-201ENSMUST00000118488 348 ntBASIC17.11■□□□□ 0.33
Usp53P15975 Zfp511-201ENSMUST00000168194 1076 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
Usp53P15975 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Usp53P15975 Crhr2-209ENSMUST00000213026 1443 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Usp53P15975 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Usp53P15975 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Usp53P15975 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Usp53P15975 Nyx-201ENSMUST00000050434 5183 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Usp53P15975 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Usp53P15975 Sp2-203ENSMUST00000107624 3055 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 28.4 ms