Protein–RNA interactions for Protein: P10855

Ccl3, C-C motif chemokine 3, mousemouse

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl3P10855 1700110K17Rik-202ENSMUST00000156511 927 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Ccl3P10855 Gm8515-201ENSMUST00000194852 576 ntBASIC13.04□□□□□ -0.32
Ccl3P10855 Trappc4-201ENSMUST00000034623 1220 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Ccl3P10855 Srd5a2-201ENSMUST00000043458 854 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Ccl3P10855 Mpc1-201ENSMUST00000046754 920 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Ccl3P10855 Pdzd11-202ENSMUST00000059099 1041 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Ccl3P10855 H2bfm-201ENSMUST00000059808 1052 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
Ccl3P10855 Gm6180-201ENSMUST00000065243 498 ntBASIC13.04□□□□□ -0.32
Ccl3P10855 S100a7a-201ENSMUST00000079286 1280 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Ccl3P10855 2610027K06Rik-203ENSMUST00000140673 2076 ntTSL 5 BASIC13.04□□□□□ -0.32
Ccl3P10855 Hnrnpa3-202ENSMUST00000111961 1734 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Ccl3P10855 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Ccl3P10855 Pde7b-206ENSMUST00000170265 1380 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
Ccl3P10855 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Ccl3P10855 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Ccl3P10855 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Ccl3P10855 Ldb3-207ENSMUST00000227819 1499 ntBASIC13.04□□□□□ -0.32
Ccl3P10855 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
Ccl3P10855 Anapc5-201ENSMUST00000086216 2760 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ccl3P10855 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ccl3P10855 Sipa1l1-202ENSMUST00000166429 8215 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ccl3P10855 Tfap2a-203ENSMUST00000223869 2037 ntBASIC13.03□□□□□ -0.32
Ccl3P10855 Elk4-201ENSMUST00000027696 1586 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ccl3P10855 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ccl3P10855 Rrnad1-206ENSMUST00000160074 1620 ntTSL 5 BASIC13.03□□□□□ -0.32
Ccl3P10855 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC13.03□□□□□ -0.32
Ccl3P10855 Entpd7-201ENSMUST00000081079 5911 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ccl3P10855 Mapk8ip3-201ENSMUST00000088345 5543 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ccl3P10855 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ccl3P10855 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Ccl3P10855 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
Ccl3P10855 Tom1-202ENSMUST00000165630 2267 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ccl3P10855 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ccl3P10855 Gm22189-201ENSMUST00000103822 86 ntBASIC13.03□□□□□ -0.32
Ccl3P10855 Rnd1-202ENSMUST00000109149 1034 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Ccl3P10855 Gm14042-201ENSMUST00000120139 833 ntBASIC13.03□□□□□ -0.32
Ccl3P10855 Atp6v1f-203ENSMUST00000149646 806 ntTSL 5 BASIC13.03□□□□□ -0.32
Ccl3P10855 Alms1-ps2-201ENSMUST00000160606 1170 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Ccl3P10855 Gm9522-201ENSMUST00000182394 926 ntBASIC13.03□□□□□ -0.32
Ccl3P10855 Gm18187-201ENSMUST00000196476 984 ntBASIC13.03□□□□□ -0.32
Ccl3P10855 Gm42612-201ENSMUST00000197986 623 ntBASIC13.03□□□□□ -0.32
Ccl3P10855 Gm43170-201ENSMUST00000199827 612 ntBASIC13.03□□□□□ -0.32
Ccl3P10855 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Ccl3P10855 AC130829.1-201ENSMUST00000221548 494 ntBASIC13.03□□□□□ -0.32
Ccl3P10855 Bccip-201ENSMUST00000033282 1244 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ccl3P10855 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ccl3P10855 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
Ccl3P10855 Galt-202ENSMUST00000108038 1859 ntAPPRIS ALT2 TSL 2 BASIC13.03□□□□□ -0.32
Ccl3P10855 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ccl3P10855 Gm29154-231ENSMUST00000215120 1367 ntTSL 5 BASIC13.03□□□□□ -0.32
Ccl3P10855 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ccl3P10855 Zfp422-203ENSMUST00000112880 2523 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ccl3P10855 Gm13425-201ENSMUST00000145389 5391 ntTSL 3 BASIC13.03□□□□□ -0.32
Ccl3P10855 Spopl-203ENSMUST00000132484 6595 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Ccl3P10855 Nfyb-204ENSMUST00000130911 2554 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ccl3P10855 Acrbp-205ENSMUST00000112414 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ccl3P10855 Tmtc2-201ENSMUST00000061506 5629 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ccl3P10855 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Ccl3P10855 Prrxl1-203ENSMUST00000187377 1629 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Ccl3P10855 Hivep3-201ENSMUST00000084306 2973 ntBASIC13.02□□□□□ -0.32
Ccl3P10855 Gm43195-201ENSMUST00000200614 2332 ntBASIC13.02□□□□□ -0.32
Ccl3P10855 Irs2-201ENSMUST00000040514 6323 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Ccl3P10855 Prob1-201ENSMUST00000097619 3021 ntBASIC13.02□□□□□ -0.32
Ccl3P10855 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.32
Ccl3P10855 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC13.02□□□□□ -0.32
Ccl3P10855 Ogfrl1-201ENSMUST00000027343 4844 ntAPPRIS P1 TSL 3 BASIC13.02□□□□□ -0.32
Ccl3P10855 Kif21a-203ENSMUST00000100304 6439 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.32
Ccl3P10855 Kif21a-202ENSMUST00000088614 6439 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.32
Ccl3P10855 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Ccl3P10855 Xpo6-201ENSMUST00000009344 4455 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
Ccl3P10855 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Ccl3P10855 Crip3-202ENSMUST00000113465 1035 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Ccl3P10855 Stra8-202ENSMUST00000114997 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Ccl3P10855 Gm8749-201ENSMUST00000117737 331 ntBASIC13.02□□□□□ -0.33
Ccl3P10855 Akirin1-ps-201ENSMUST00000119676 458 ntBASIC13.02□□□□□ -0.33
Ccl3P10855 Rnd1-203ENSMUST00000120997 856 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Ccl3P10855 Lats1-202ENSMUST00000165952 7209 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Ccl3P10855 Coa6-202ENSMUST00000211868 564 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Ccl3P10855 Gm7390-201ENSMUST00000212452 1216 ntBASIC13.02□□□□□ -0.33
Ccl3P10855 Gm9182-201ENSMUST00000217829 639 ntBASIC13.02□□□□□ -0.33
Ccl3P10855 AC159619.3-201ENSMUST00000222694 473 ntTSL 5 BASIC13.02□□□□□ -0.33
Ccl3P10855 Gm9229-201ENSMUST00000222777 126 ntBASIC13.02□□□□□ -0.33
Ccl3P10855 Mzt2-201ENSMUST00000023351 1035 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Ccl3P10855 Tmprss12-201ENSMUST00000096200 1349 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Ccl3P10855 Cdk2-201ENSMUST00000026415 2240 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Ccl3P10855 Nap1l4-209ENSMUST00000209098 2281 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Ccl3P10855 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Ccl3P10855 Actl7b-201ENSMUST00000095080 1439 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
Ccl3P10855 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Ccl3P10855 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
Ccl3P10855 Fam53b-203ENSMUST00000097999 5465 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Ccl3P10855 Vopp1-204ENSMUST00000145608 4590 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Ccl3P10855 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Ccl3P10855 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Ccl3P10855 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ccl3P10855 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Ccl3P10855 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ccl3P10855 Cpeb2-205ENSMUST00000169035 7050 ntAPPRIS P2 TSL 5 BASIC13.01□□□□□ -0.33
Ccl3P10855 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ccl3P10855 Gm17315-201ENSMUST00000181408 2504 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 34.3 ms