Protein–RNA interactions for Protein: P0C8K7

Smim1, Small integral membrane protein 1, mousemouse

Predictions only

Length 78 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smim1P0C8K7 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Smim1P0C8K7 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC10.22□□□□□ -0.77
Smim1P0C8K7 Asb10-203ENSMUST00000119657 1536 ntTSL 5 BASIC10.22□□□□□ -0.77
Smim1P0C8K7 Aarsd1-201ENSMUST00000070395 1516 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Smim1P0C8K7 Gm16685-201ENSMUST00000181286 1592 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Smim1P0C8K7 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Smim1P0C8K7 Mfsd4a-205ENSMUST00000144548 3288 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Smim1P0C8K7 Galnt2-201ENSMUST00000034458 4113 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Smim1P0C8K7 C5ar1-201ENSMUST00000050770 2481 ntAPPRIS P1 TSL 3 BASIC10.22□□□□□ -0.77
Smim1P0C8K7 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Smim1P0C8K7 Slfn2-201ENSMUST00000038038 1664 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Smim1P0C8K7 Mcoln2-201ENSMUST00000011152 2520 ntAPPRIS P4 TSL 1 (best) BASIC10.22□□□□□ -0.77
Smim1P0C8K7 Prrt3-202ENSMUST00000204134 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC10.21□□□□□ -0.77
Smim1P0C8K7 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC10.21□□□□□ -0.77
Smim1P0C8K7 Bscl2-206ENSMUST00000160556 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC10.21□□□□□ -0.77
Smim1P0C8K7 Setd1b-204ENSMUST00000163030 8857 ntAPPRIS P2 TSL 5 BASIC10.21□□□□□ -0.77
Smim1P0C8K7 Clec16a-211ENSMUST00000155633 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC10.21□□□□□ -0.77
Smim1P0C8K7 Dusp6-201ENSMUST00000020118 2796 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Smim1P0C8K7 Otub2-201ENSMUST00000021620 2791 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Smim1P0C8K7 Epsti1-201ENSMUST00000022591 1870 ntAPPRIS P2 TSL 1 (best) BASIC10.21□□□□□ -0.77
Smim1P0C8K7 A730062M13Rik-201ENSMUST00000192843 1910 ntBASIC10.21□□□□□ -0.77
Smim1P0C8K7 Grk6-203ENSMUST00000224118 1997 ntAPPRIS ALT2 BASIC10.21□□□□□ -0.77
Smim1P0C8K7 Emc3-201ENSMUST00000032425 1985 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Smim1P0C8K7 Rad9a-201ENSMUST00000025740 2046 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Smim1P0C8K7 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Smim1P0C8K7 Slc37a1-201ENSMUST00000165149 3354 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Smim1P0C8K7 Scfd2-203ENSMUST00000113542 2279 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
Smim1P0C8K7 Gm853-201ENSMUST00000023884 2314 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Smim1P0C8K7 Arhgap20-201ENSMUST00000065496 7161 ntAPPRIS P2 TSL 5 BASIC10.21□□□□□ -0.77
Smim1P0C8K7 Dhx58-201ENSMUST00000017974 2412 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Smim1P0C8K7 Trpm4-209ENSMUST00000211743 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC10.21□□□□□ -0.77
Smim1P0C8K7 Spata21-201ENSMUST00000051907 2526 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Smim1P0C8K7 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Smim1P0C8K7 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Smim1P0C8K7 Mir5133-201ENSMUST00000174955 77 ntBASIC10.21□□□□□ -0.77
Smim1P0C8K7 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC10.21□□□□□ -0.77
Smim1P0C8K7 Gm42642-201ENSMUST00000200683 355 ntBASIC10.21□□□□□ -0.77
Smim1P0C8K7 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Smim1P0C8K7 Edil3-203ENSMUST00000118731 2721 ntTSL 1 (best) BASIC10.21□□□□□ -0.78
Smim1P0C8K7 Heg1-205ENSMUST00000152782 8161 ntAPPRIS ALT2 TSL 5 BASIC10.21□□□□□ -0.78
Smim1P0C8K7 Mapk8ip3-206ENSMUST00000120035 4125 ntAPPRIS ALT2 TSL 1 (best) BASIC10.21□□□□□ -0.78
Smim1P0C8K7 Lysmd4-201ENSMUST00000058771 2898 ntAPPRIS P2 TSL 1 (best) BASIC10.21□□□□□ -0.78
Smim1P0C8K7 AC117194.1-201ENSMUST00000224847 3002 ntBASIC10.21□□□□□ -0.78
Smim1P0C8K7 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Smim1P0C8K7 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC10.21□□□□□ -0.78
Smim1P0C8K7 Yes1-201ENSMUST00000072311 4586 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Smim1P0C8K7 Samd7-201ENSMUST00000108262 3144 ntAPPRIS P1 TSL 5 BASIC10.21□□□□□ -0.78
Smim1P0C8K7 Pde1c-209ENSMUST00000203372 3147 ntAPPRIS ALT2 TSL 5 BASIC10.21□□□□□ -0.78
Smim1P0C8K7 Ackr4-204ENSMUST00000219146 1654 ntAPPRIS P1 TSL 5 BASIC10.21□□□□□ -0.78
Smim1P0C8K7 Ap2a1-204ENSMUST00000167930 3376 ntTSL 5 BASIC10.21□□□□□ -0.78
Smim1P0C8K7 Map6-205ENSMUST00000207883 3431 ntAPPRIS P3 TSL 1 (best) BASIC10.21□□□□□ -0.78
Smim1P0C8K7 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC10.21□□□□□ -0.78
Smim1P0C8K7 Necap2-201ENSMUST00000030760 1906 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Smim1P0C8K7 Src-202ENSMUST00000092576 3887 ntTSL 5 BASIC10.21□□□□□ -0.78
Smim1P0C8K7 Ankrd13c-201ENSMUST00000040787 3903 ntAPPRIS P1 TSL 5 BASIC10.21□□□□□ -0.78
Smim1P0C8K7 Ccdc155-201ENSMUST00000121017 2262 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Smim1P0C8K7 Tmem215-202ENSMUST00000179526 2276 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Smim1P0C8K7 Col2a1-202ENSMUST00000088355 4862 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Smim1P0C8K7 Sdha-201ENSMUST00000022062 2900 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Smim1P0C8K7 Zfp672-204ENSMUST00000108829 3094 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Smim1P0C8K7 Taf1c-201ENSMUST00000093099 3236 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Smim1P0C8K7 Gak-201ENSMUST00000046603 4453 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Smim1P0C8K7 Dzip1-202ENSMUST00000047208 4476 ntAPPRIS P1 TSL 5 BASIC10.2□□□□□ -0.78
Smim1P0C8K7 Pigg-203ENSMUST00000119014 4573 ntAPPRIS ALT2 TSL 5 BASIC10.2□□□□□ -0.78
Smim1P0C8K7 Kdm4b-201ENSMUST00000025036 4577 ntAPPRIS P2 TSL 1 (best) BASIC10.2□□□□□ -0.78
Smim1P0C8K7 Knop1-204ENSMUST00000106550 5524 ntAPPRIS P3 TSL 1 (best) BASIC10.2□□□□□ -0.78
Smim1P0C8K7 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Smim1P0C8K7 Grk4-201ENSMUST00000001112 2408 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Smim1P0C8K7 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Smim1P0C8K7 Hsd17b11-202ENSMUST00000119025 2234 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Smim1P0C8K7 Tpt1-ps6-201ENSMUST00000121768 523 ntBASIC10.2□□□□□ -0.78
Smim1P0C8K7 Sugp2-214ENSMUST00000164403 4099 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Smim1P0C8K7 Cndp2-202ENSMUST00000168419 2088 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Smim1P0C8K7 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC10.2□□□□□ -0.78
Smim1P0C8K7 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Smim1P0C8K7 5430427M07Rik-202ENSMUST00000221524 1023 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Smim1P0C8K7 Gpt-201ENSMUST00000023203 1749 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Smim1P0C8K7 Senp5-201ENSMUST00000023457 3498 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Smim1P0C8K7 Traf1-201ENSMUST00000028234 2069 ntAPPRIS P1 TSL 5 BASIC10.2□□□□□ -0.78
Smim1P0C8K7 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Smim1P0C8K7 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC10.2□□□□□ -0.78
Smim1P0C8K7 Snai3-201ENSMUST00000006762 1628 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Smim1P0C8K7 Osbpl1a-201ENSMUST00000074352 3956 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Smim1P0C8K7 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC10.2□□□□□ -0.78
Smim1P0C8K7 Noto-201ENSMUST00000089578 1602 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Smim1P0C8K7 Eef1d-204ENSMUST00000089681 2152 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Smim1P0C8K7 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC10.2□□□□□ -0.78
Smim1P0C8K7 Mroh1-202ENSMUST00000096385 5268 ntAPPRIS P4 TSL 1 (best) BASIC10.2□□□□□ -0.78
Smim1P0C8K7 Klhl18-203ENSMUST00000198164 4538 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Smim1P0C8K7 Kirrel-202ENSMUST00000107618 7278 ntAPPRIS P2 TSL 5 BASIC10.2□□□□□ -0.78
Smim1P0C8K7 Prrt3-201ENSMUST00000101059 3304 ntAPPRIS P3 TSL 1 (best) BASIC10.2□□□□□ -0.78
Smim1P0C8K7 Mib1-205ENSMUST00000165555 3216 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Smim1P0C8K7 Tubgcp4-215ENSMUST00000186659 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Smim1P0C8K7 Pard3b-202ENSMUST00000075374 8392 ntAPPRIS P2 TSL 5 BASIC10.2□□□□□ -0.78
Smim1P0C8K7 Spib-201ENSMUST00000035323 2788 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Smim1P0C8K7 Cdk8-205ENSMUST00000161181 2467 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Smim1P0C8K7 Cbs-203ENSMUST00000118504 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC10.19□□□□□ -0.78
Smim1P0C8K7 Bak1-202ENSMUST00000078691 2387 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Smim1P0C8K7 Atg7-207ENSMUST00000182428 2264 ntAPPRIS ALT2 TSL 5 BASIC10.19□□□□□ -0.78
Smim1P0C8K7 5830418P13Rik-201ENSMUST00000143564 2178 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Retrieved 100 of 76,532 protein–RNA pairs in 46.9 ms