Protein–RNA interactions for Protein: P09025

Hoxc8, Homeobox protein Hox-C8, mousemouse

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc8P09025 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Hoxc8P09025 Ints8-203ENSMUST00000108319 3220 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Hoxc8P09025 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC15.68■□□□□ 0.1
Hoxc8P09025 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Hoxc8P09025 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Hoxc8P09025 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Hoxc8P09025 Ptpa-203ENSMUST00000113603 2169 ntTSL 5 BASIC15.68■□□□□ 0.1
Hoxc8P09025 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Hoxc8P09025 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Hoxc8P09025 Mcrs1-202ENSMUST00000163506 1795 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Hoxc8P09025 Atcayos-202ENSMUST00000129950 1117 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Hoxc8P09025 4932443L11Rik-201ENSMUST00000148353 414 ntTSL 5 BASIC15.68■□□□□ 0.1
Hoxc8P09025 Fam219aos-201ENSMUST00000151164 708 ntTSL 2 BASIC15.68■□□□□ 0.1
Hoxc8P09025 Gsg1l2-202ENSMUST00000181566 1158 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Hoxc8P09025 1700022A21Rik-201ENSMUST00000182745 1051 ntBASIC15.68■□□□□ 0.1
Hoxc8P09025 Gm28760-201ENSMUST00000185995 736 ntBASIC15.68■□□□□ 0.1
Hoxc8P09025 Cxcl17-202ENSMUST00000200880 760 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Hoxc8P09025 Isca2-201ENSMUST00000021667 883 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Hoxc8P09025 AC087891.2-201ENSMUST00000219293 658 ntTSL 5 BASIC15.68■□□□□ 0.1
Hoxc8P09025 AC159619.3-201ENSMUST00000222694 473 ntTSL 5 BASIC15.68■□□□□ 0.1
Hoxc8P09025 AC121598.1-201ENSMUST00000228224 1019 ntBASIC15.68■□□□□ 0.1
Hoxc8P09025 Cxcl17-201ENSMUST00000074040 761 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
Hoxc8P09025 Eftud2-202ENSMUST00000107060 3339 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Hoxc8P09025 Bbs10-201ENSMUST00000040454 2744 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
Hoxc8P09025 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
Hoxc8P09025 Miip-201ENSMUST00000030886 1813 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Hoxc8P09025 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Hoxc8P09025 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Hoxc8P09025 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Hoxc8P09025 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Hoxc8P09025 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Hoxc8P09025 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Hoxc8P09025 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Hoxc8P09025 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Hoxc8P09025 Hdac8-201ENSMUST00000087916 1936 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Hoxc8P09025 Vav1-204ENSMUST00000169220 2810 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Hoxc8P09025 Pmvk-202ENSMUST00000107410 652 ntTSL 5 BASIC15.67■□□□□ 0.1
Hoxc8P09025 Gm12138-201ENSMUST00000122180 951 ntBASIC15.67■□□□□ 0.1
Hoxc8P09025 Gm15222-201ENSMUST00000127359 344 ntTSL 3 BASIC15.67■□□□□ 0.1
Hoxc8P09025 1700072B07Rik-201ENSMUST00000191141 445 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Hoxc8P09025 Mpv17-207ENSMUST00000201491 923 ntTSL 2 BASIC15.67■□□□□ 0.1
Hoxc8P09025 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Hoxc8P09025 Ins1-201ENSMUST00000039652 1016 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Hoxc8P09025 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Hoxc8P09025 Pdia2-201ENSMUST00000039113 1721 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Hoxc8P09025 Spo11-201ENSMUST00000050442 1709 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
Hoxc8P09025 Gm9252-201ENSMUST00000172364 1602 ntBASIC15.67■□□□□ 0.1
Hoxc8P09025 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC15.67■□□□□ 0.1
Hoxc8P09025 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Hoxc8P09025 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
Hoxc8P09025 Gm6297-201ENSMUST00000181475 2146 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Hoxc8P09025 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
Hoxc8P09025 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Hoxc8P09025 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Hoxc8P09025 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Hoxc8P09025 Erich6-201ENSMUST00000041115 2195 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
Hoxc8P09025 Nupr1l-201ENSMUST00000178355 1827 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
Hoxc8P09025 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC15.66■□□□□ 0.1
Hoxc8P09025 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Hoxc8P09025 Serpina11-202ENSMUST00000120251 1461 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Hoxc8P09025 Pdlim3-203ENSMUST00000210422 1479 ntAPPRIS ALT1 TSL 5 BASIC15.66■□□□□ 0.1
Hoxc8P09025 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Hoxc8P09025 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Hoxc8P09025 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Hoxc8P09025 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Hoxc8P09025 Prrx2-202ENSMUST00000113592 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Hoxc8P09025 Gfpt1-203ENSMUST00000113657 1200 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Hoxc8P09025 Gm33320-201ENSMUST00000192232 530 ntBASIC15.66■□□□□ 0.1
Hoxc8P09025 Gm37917-201ENSMUST00000194711 392 ntBASIC15.66■□□□□ 0.1
Hoxc8P09025 Ip6k2-210ENSMUST00000194875 748 ntTSL 2 BASIC15.66■□□□□ 0.1
Hoxc8P09025 H2-Bl-210ENSMUST00000195833 829 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Hoxc8P09025 Gm18624-201ENSMUST00000220966 658 ntBASIC15.66■□□□□ 0.1
Hoxc8P09025 Taf11-201ENSMUST00000025057 1220 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Hoxc8P09025 Olfr1412-201ENSMUST00000062964 966 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
Hoxc8P09025 Jup-202ENSMUST00000107403 2386 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
Hoxc8P09025 Gpank1-202ENSMUST00000165306 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Hoxc8P09025 Pdia2-202ENSMUST00000120333 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Hoxc8P09025 Gclc-201ENSMUST00000034905 3423 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Hoxc8P09025 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Hoxc8P09025 Dock1-206ENSMUST00000211593 2589 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Hoxc8P09025 Apoa4-201ENSMUST00000034585 1815 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Hoxc8P09025 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Hoxc8P09025 Nfkbia-201ENSMUST00000021413 1578 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Hoxc8P09025 Gm9115-201ENSMUST00000120192 1348 ntBASIC15.66■□□□□ 0.1
Hoxc8P09025 Tmprss12-201ENSMUST00000096200 1349 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Hoxc8P09025 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Hoxc8P09025 Gm40765-201ENSMUST00000218612 1469 ntTSL 5 BASIC15.65■□□□□ 0.1
Hoxc8P09025 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC15.65■□□□□ 0.1
Hoxc8P09025 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
Hoxc8P09025 Dnase1l2-202ENSMUST00000119932 1629 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Hoxc8P09025 Cant1-202ENSMUST00000092378 2995 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Hoxc8P09025 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Hoxc8P09025 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Hoxc8P09025 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
Hoxc8P09025 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
Hoxc8P09025 Mul1-203ENSMUST00000105815 473 ntTSL 3 BASIC15.65■□□□□ 0.1
Hoxc8P09025 Gm15460-201ENSMUST00000118147 391 ntBASIC15.65■□□□□ 0.1
Hoxc8P09025 Tbc1d17-209ENSMUST00000207293 692 ntTSL 3 BASIC15.65■□□□□ 0.1
Hoxc8P09025 Gm9908-201ENSMUST00000211534 448 ntBASIC15.65■□□□□ 0.1
Hoxc8P09025 Tmem253-203ENSMUST00000227295 704 ntAPPRIS ALT2 BASIC15.65■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 43.1 ms