Protein–RNA interactions for Protein: P06344

H-2 class II histocompatibility antigen, A-U beta chain, mousemouse

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P06344 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.3
P06344 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
P06344 Hsd17b7-202ENSMUST00000111353 1446 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
P06344 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
P06344 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.3
P06344 Spopl-203ENSMUST00000132484 6595 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.3
P06344 Cacna1i-202ENSMUST00000160424 9781 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
P06344 Nupr1l-201ENSMUST00000178355 1827 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
P06344 Skor1-203ENSMUST00000119146 3610 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
P06344 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
P06344 Fbxl12-205ENSMUST00000140702 1555 ntBASIC13.2□□□□□ -0.3
P06344 Arl6-202ENSMUST00000099646 1554 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
P06344 Gfod1-201ENSMUST00000055341 6928 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
P06344 AC167013.2-201ENSMUST00000228520 2684 ntBASIC13.2□□□□□ -0.3
P06344 Prtg-201ENSMUST00000055535 9148 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
P06344 Abhd16b-201ENSMUST00000069649 1775 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
P06344 Zfr2-201ENSMUST00000117798 3349 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
P06344 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
P06344 Tex13a-201ENSMUST00000096314 1317 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
P06344 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC13.2□□□□□ -0.3
P06344 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC13.2□□□□□ -0.3
P06344 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
P06344 Fen1-204ENSMUST00000156291 2373 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
P06344 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
P06344 Camk2g-217ENSMUST00000226630 1937 ntBASIC13.2□□□□□ -0.3
P06344 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
P06344 Zfp74-203ENSMUST00000108211 1278 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
P06344 Ercc8-202ENSMUST00000120672 1144 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
P06344 Gm15593-201ENSMUST00000122085 1008 ntBASIC13.2□□□□□ -0.3
P06344 Tex30-213ENSMUST00000156392 1122 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
P06344 Gm16026-204ENSMUST00000162652 683 ntBASIC13.2□□□□□ -0.3
P06344 1700021A07Rik-203ENSMUST00000188024 404 ntTSL 3 BASIC13.2□□□□□ -0.3
P06344 3110079O15Rik-201ENSMUST00000027476 478 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
P06344 Gm9789-201ENSMUST00000062524 397 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
P06344 Plxnc1-201ENSMUST00000099337 7302 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
P06344 Fbxw2-205ENSMUST00000113078 1872 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
P06344 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
P06344 Nfe2l2-201ENSMUST00000102672 2475 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
P06344 Dok7-201ENSMUST00000050709 2498 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
P06344 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
P06344 Tpi1-205ENSMUST00000172132 1607 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
P06344 Appbp2-201ENSMUST00000018625 6463 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
P06344 Lipo3-202ENSMUST00000112508 2839 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
P06344 Sptlc2-201ENSMUST00000021424 6710 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
P06344 Tpbg-201ENSMUST00000006559 3603 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
P06344 Coq10a-205ENSMUST00000220027 1307 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
P06344 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
P06344 Skor1-202ENSMUST00000116613 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
P06344 Zbtb33-202ENSMUST00000115142 2567 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
P06344 Slc12a5-201ENSMUST00000099092 6028 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
P06344 C530008M17Rik-205ENSMUST00000121851 1165 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
P06344 2410006H16Rik-201ENSMUST00000131787 462 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
P06344 Bcl2l2-204ENSMUST00000172844 498 ntTSL 5 BASIC13.19□□□□□ -0.3
P06344 Gm30437-201ENSMUST00000206086 1201 ntBASIC13.19□□□□□ -0.3
P06344 CT030684.1-201ENSMUST00000227292 914 ntBASIC13.19□□□□□ -0.3
P06344 H2-K1-202ENSMUST00000087189 579 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
P06344 Pdlim4-202ENSMUST00000093109 962 ntTSL 5 BASIC13.19□□□□□ -0.3
P06344 Chac1-201ENSMUST00000028780 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
P06344 Sympk-201ENSMUST00000023882 4116 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
P06344 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
P06344 Luc7l-203ENSMUST00000119928 1441 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
P06344 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
P06344 Rnf181-201ENSMUST00000069580 1434 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
P06344 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
P06344 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
P06344 Ube2l6-201ENSMUST00000102642 1560 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
P06344 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
P06344 Sptlc1-201ENSMUST00000021920 2606 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
P06344 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
P06344 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC13.19□□□□□ -0.3
P06344 Pola2-201ENSMUST00000025752 2424 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
P06344 P4ha2-215ENSMUST00000174616 2094 ntTSL 5 BASIC13.19□□□□□ -0.3
P06344 Aanat-205ENSMUST00000153476 1353 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
P06344 Zfp316-201ENSMUST00000051665 3054 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
P06344 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
P06344 Trim63-201ENSMUST00000030638 1855 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
P06344 Klf15-202ENSMUST00000113530 2374 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
P06344 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC13.18□□□□□ -0.3
P06344 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC13.18□□□□□ -0.3
P06344 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
P06344 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
P06344 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
P06344 Psrc1-201ENSMUST00000090561 1686 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
P06344 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
P06344 Tnxb-202ENSMUST00000168533 9381 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
P06344 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
P06344 Flrt2-202ENSMUST00000110117 3223 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
P06344 Kdr-201ENSMUST00000113516 5924 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
P06344 B4galt3-202ENSMUST00000111313 2098 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
P06344 Igf2-203ENSMUST00000105935 650 ntAPPRIS P1 TSL 3 BASIC13.18□□□□□ -0.3
P06344 Gm11201-201ENSMUST00000143473 701 ntTSL 3 BASIC13.18□□□□□ -0.3
P06344 2310061I04Rik-204ENSMUST00000148721 1293 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
P06344 Slc36a3os-201ENSMUST00000155883 520 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
P06344 Gm18889-201ENSMUST00000174284 929 ntBASIC13.18□□□□□ -0.3
P06344 Smco4-202ENSMUST00000178999 820 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
P06344 Prr29-205ENSMUST00000190268 1141 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
P06344 Gm44335-201ENSMUST00000196879 141 ntBASIC13.18□□□□□ -0.3
P06344 Gm44297-201ENSMUST00000198304 141 ntBASIC13.18□□□□□ -0.3
P06344 Gm44346-201ENSMUST00000198851 141 ntBASIC13.18□□□□□ -0.3
P06344 Cdipt-205ENSMUST00000206450 951 ntTSL 5 BASIC13.18□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 32.5 ms