Protein–RNA interactions for Protein: P04925

Prnp, Major prion protein, mousemouse

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PrnpP04925 Adk-207ENSMUST00000224069 1818 ntAPPRIS ALT1 BASIC15.3■□□□□ 0.04
PrnpP04925 Fam217a-204ENSMUST00000225242 1811 ntAPPRIS ALT2 BASIC15.3■□□□□ 0.04
PrnpP04925 Elk4-201ENSMUST00000027696 1586 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
PrnpP04925 Gm5519-201ENSMUST00000042061 513 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
PrnpP04925 Tubg2-201ENSMUST00000043654 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
PrnpP04925 Oaz1-ps-201ENSMUST00000052440 681 ntBASIC15.3■□□□□ 0.04
PrnpP04925 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
PrnpP04925 Hfe-201ENSMUST00000006787 516 ntTSL 5 BASIC15.3■□□□□ 0.04
PrnpP04925 Hfe-203ENSMUST00000091707 816 ntTSL 5 BASIC15.3■□□□□ 0.04
PrnpP04925 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
PrnpP04925 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
PrnpP04925 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
PrnpP04925 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
PrnpP04925 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
PrnpP04925 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
PrnpP04925 Bcl2l14-206ENSMUST00000163589 2131 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
PrnpP04925 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
PrnpP04925 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
PrnpP04925 Rrnad1-206ENSMUST00000160074 1620 ntTSL 5 BASIC15.29■□□□□ 0.04
PrnpP04925 Slc25a47-201ENSMUST00000057026 1580 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
PrnpP04925 Gm29154-231ENSMUST00000215120 1367 ntTSL 5 BASIC15.29■□□□□ 0.04
PrnpP04925 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
PrnpP04925 Crtc3-201ENSMUST00000122255 5115 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
PrnpP04925 Myl4-203ENSMUST00000106957 943 ntAPPRIS P1 TSL 3 BASIC15.29■□□□□ 0.04
PrnpP04925 Crip3-202ENSMUST00000113465 1035 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
PrnpP04925 Fbxw4-204ENSMUST00000160018 931 ntTSL 3 BASIC15.29■□□□□ 0.04
PrnpP04925 4930478K11Rik-201ENSMUST00000181875 715 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
PrnpP04925 Gm9229-201ENSMUST00000222777 126 ntBASIC15.29■□□□□ 0.04
PrnpP04925 2610528J11Rik-201ENSMUST00000030261 958 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
PrnpP04925 Ndufc2-201ENSMUST00000032882 683 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
PrnpP04925 Phgr1-201ENSMUST00000061360 538 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
PrnpP04925 Gm10188-201ENSMUST00000086544 720 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
PrnpP04925 Msl2-201ENSMUST00000085177 4889 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
PrnpP04925 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
PrnpP04925 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
PrnpP04925 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
PrnpP04925 Sptlc2-201ENSMUST00000021424 6710 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
PrnpP04925 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
PrnpP04925 Cdon-202ENSMUST00000119129 7503 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
PrnpP04925 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
PrnpP04925 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
PrnpP04925 Dsg2-201ENSMUST00000059787 5766 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
PrnpP04925 Tmem201-201ENSMUST00000054459 4631 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
PrnpP04925 Arhgef9-217ENSMUST00000197364 1796 ntTSL 5 BASIC15.29■□□□□ 0.04
PrnpP04925 Zfp422-203ENSMUST00000112880 2523 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PrnpP04925 Slc9a3r2-202ENSMUST00000019684 1688 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
PrnpP04925 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PrnpP04925 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PrnpP04925 Mapk9-201ENSMUST00000020634 4675 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
PrnpP04925 Vopp1-204ENSMUST00000145608 4590 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
PrnpP04925 Ralgapa2-211ENSMUST00000228797 8245 ntAPPRIS ALT2 BASIC15.28■□□□□ 0.04
PrnpP04925 Cep85l-205ENSMUST00000220443 7425 ntAPPRIS P2 TSL 5 BASIC15.28■□□□□ 0.04
PrnpP04925 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PrnpP04925 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC15.28■□□□□ 0.04
PrnpP04925 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
PrnpP04925 Gm10406-202ENSMUST00000170738 1955 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
PrnpP04925 Gm14928-201ENSMUST00000120198 477 ntBASIC15.28■□□□□ 0.04
PrnpP04925 Gm15294-202ENSMUST00000182079 366 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
PrnpP04925 Olfr286-202ENSMUST00000205305 969 ntBASIC15.28■□□□□ 0.04
PrnpP04925 Gm45195-201ENSMUST00000205597 1008 ntBASIC15.28■□□□□ 0.04
PrnpP04925 Med10-204ENSMUST00000221893 815 ntTSL 2 BASIC15.28■□□□□ 0.04
PrnpP04925 AC154239.3-201ENSMUST00000226933 674 ntBASIC15.28■□□□□ 0.04
PrnpP04925 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC15.28■□□□□ 0.04
PrnpP04925 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PrnpP04925 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
PrnpP04925 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PrnpP04925 Tom1-202ENSMUST00000165630 2267 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PrnpP04925 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PrnpP04925 Esr1-202ENSMUST00000105588 2733 ntTSL 5 BASIC15.28■□□□□ 0.04
PrnpP04925 Exoc6-201ENSMUST00000066439 2729 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PrnpP04925 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PrnpP04925 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
PrnpP04925 Gas2l3-207ENSMUST00000220128 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
PrnpP04925 Cndp2-202ENSMUST00000168419 2088 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PrnpP04925 Nfyb-204ENSMUST00000130911 2554 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PrnpP04925 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
PrnpP04925 Gm27528-202ENSMUST00000222916 2012 ntBASIC15.27■□□□□ 0.04
PrnpP04925 Prob1-201ENSMUST00000097619 3021 ntBASIC15.27■□□□□ 0.04
PrnpP04925 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
PrnpP04925 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC15.27■□□□□ 0.04
PrnpP04925 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
PrnpP04925 Med14-202ENSMUST00000096495 6963 ntAPPRIS P2 TSL 5 BASIC15.27■□□□□ 0.04
PrnpP04925 Zfp868-202ENSMUST00000121886 2259 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
PrnpP04925 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
PrnpP04925 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
PrnpP04925 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
PrnpP04925 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
PrnpP04925 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC15.27■□□□□ 0.04
PrnpP04925 B230359F08Rik-201ENSMUST00000103671 426 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
PrnpP04925 Gm9726-201ENSMUST00000180321 678 ntBASIC15.27■□□□□ 0.04
PrnpP04925 Lamtor1-202ENSMUST00000193465 661 ntTSL 5 BASIC15.27■□□□□ 0.04
PrnpP04925 Ighv5-13-201ENSMUST00000193550 290 ntBASIC15.27■□□□□ 0.04
PrnpP04925 AC087891.2-201ENSMUST00000219293 658 ntTSL 5 BASIC15.27■□□□□ 0.04
PrnpP04925 Mpc1-201ENSMUST00000046754 920 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
PrnpP04925 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
PrnpP04925 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
PrnpP04925 Acbd5-203ENSMUST00000114526 3725 ntAPPRIS P4 TSL 1 (best) BASIC15.27■□□□□ 0.03
PrnpP04925 Prrxl1-203ENSMUST00000187377 1629 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
PrnpP04925 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.03
PrnpP04925 Gpx3-201ENSMUST00000082430 1594 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 32.5 ms