Protein–RNA interactions for Protein: P02301

H3f3c, Histone H3.3C, mousemouse

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3f3cP02301 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC12.73□□□□□ -0.37
H3f3cP02301 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
H3f3cP02301 Car10-205ENSMUST00000107861 2613 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
H3f3cP02301 Adam10-201ENSMUST00000067880 4593 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
H3f3cP02301 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
H3f3cP02301 Fbxo41-203ENSMUST00000161546 6357 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
H3f3cP02301 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
H3f3cP02301 Pla2g10-201ENSMUST00000023364 1423 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
H3f3cP02301 Samd14-201ENSMUST00000055947 3318 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
H3f3cP02301 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
H3f3cP02301 Adamts20-201ENSMUST00000035342 6027 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
H3f3cP02301 AC174678.1-201ENSMUST00000228007 2749 ntBASIC12.72□□□□□ -0.37
H3f3cP02301 Rbfox3-201ENSMUST00000017576 3150 ntAPPRIS P4 TSL 1 (best) BASIC12.72□□□□□ -0.37
H3f3cP02301 Derl1-201ENSMUST00000022993 3175 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
H3f3cP02301 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
H3f3cP02301 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
H3f3cP02301 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
H3f3cP02301 Gsg1-201ENSMUST00000087729 1307 ntAPPRIS P4 TSL 1 (best) BASIC12.72□□□□□ -0.37
H3f3cP02301 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
H3f3cP02301 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
H3f3cP02301 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
H3f3cP02301 Oxtr-201ENSMUST00000053306 4704 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
H3f3cP02301 Tmem254c-202ENSMUST00000100819 1211 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
H3f3cP02301 Dnajc24-201ENSMUST00000102555 1197 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
H3f3cP02301 Cd164l2-201ENSMUST00000105910 986 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
H3f3cP02301 Cyb5rl-204ENSMUST00000106760 840 ntTSL 3 BASIC12.72□□□□□ -0.37
H3f3cP02301 Dlk1-203ENSMUST00000109842 1129 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
H3f3cP02301 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
H3f3cP02301 Mir8117-201ENSMUST00000184773 107 ntBASIC12.72□□□□□ -0.37
H3f3cP02301 1700017L05Rik-201ENSMUST00000201654 558 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
H3f3cP02301 Gm45683-201ENSMUST00000210825 1247 ntBASIC12.72□□□□□ -0.37
H3f3cP02301 AC159295.1-201ENSMUST00000225326 940 ntBASIC12.72□□□□□ -0.37
H3f3cP02301 Tamm41-201ENSMUST00000032461 1168 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
H3f3cP02301 Rpl28-202ENSMUST00000078432 772 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
H3f3cP02301 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC12.72□□□□□ -0.37
H3f3cP02301 Arhgap26-201ENSMUST00000097593 7898 ntAPPRIS P2 TSL 5 BASIC12.72□□□□□ -0.37
H3f3cP02301 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
H3f3cP02301 Phykpl-201ENSMUST00000020625 1609 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
H3f3cP02301 Gpt2-201ENSMUST00000034136 3639 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
H3f3cP02301 Arhgef9-219ENSMUST00000199920 1976 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
H3f3cP02301 Synj1-203ENSMUST00000121759 7090 ntAPPRIS P4 TSL 5 BASIC12.72□□□□□ -0.37
H3f3cP02301 Mief1-202ENSMUST00000166030 2712 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
H3f3cP02301 8030474K03Rik-202ENSMUST00000151231 1940 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
H3f3cP02301 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
H3f3cP02301 Gm5096-201ENSMUST00000091776 1858 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
H3f3cP02301 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
H3f3cP02301 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC12.72□□□□□ -0.37
H3f3cP02301 Agbl5-202ENSMUST00000114700 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
H3f3cP02301 Zfp606-201ENSMUST00000098822 4748 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
H3f3cP02301 Rbm26-201ENSMUST00000022715 3633 ntTSL 5 BASIC12.71□□□□□ -0.37
H3f3cP02301 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
H3f3cP02301 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
H3f3cP02301 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
H3f3cP02301 Tbc1d20-201ENSMUST00000028963 3386 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
H3f3cP02301 Ccny-201ENSMUST00000053917 4017 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
H3f3cP02301 Gm5069-201ENSMUST00000050581 1328 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
H3f3cP02301 Sema3b-204ENSMUST00000102531 2958 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
H3f3cP02301 Dusp15-203ENSMUST00000123121 2993 ntAPPRIS P1 TSL 3 BASIC12.71□□□□□ -0.37
H3f3cP02301 Steap2-202ENSMUST00000115424 3285 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
H3f3cP02301 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
H3f3cP02301 Slc5a5-201ENSMUST00000000809 2928 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
H3f3cP02301 Tbc1d4-209ENSMUST00000161991 6483 ntAPPRIS P2 TSL 5 BASIC12.71□□□□□ -0.37
H3f3cP02301 Snx11-201ENSMUST00000021246 2551 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
H3f3cP02301 Vps25-203ENSMUST00000100414 1220 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
H3f3cP02301 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC12.71□□□□□ -0.37
H3f3cP02301 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
H3f3cP02301 Gm11779-201ENSMUST00000118541 368 ntBASIC12.71□□□□□ -0.37
H3f3cP02301 Mras-202ENSMUST00000119472 1190 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
H3f3cP02301 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.37
H3f3cP02301 Ccer2-201ENSMUST00000178767 1054 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
H3f3cP02301 Gm43767-201ENSMUST00000198933 381 ntBASIC12.71□□□□□ -0.37
H3f3cP02301 Gm44596-201ENSMUST00000204223 647 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
H3f3cP02301 Gm44945-201ENSMUST00000206764 1187 ntBASIC12.71□□□□□ -0.37
H3f3cP02301 CT010506.4-201ENSMUST00000225457 351 ntBASIC12.71□□□□□ -0.37
H3f3cP02301 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
H3f3cP02301 Bex3-201ENSMUST00000053540 930 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
H3f3cP02301 Arl6-202ENSMUST00000099646 1554 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
H3f3cP02301 Nop56-202ENSMUST00000103198 1877 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
H3f3cP02301 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
H3f3cP02301 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
H3f3cP02301 Il11ra1-202ENSMUST00000108040 1837 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.38
H3f3cP02301 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
H3f3cP02301 Rest-202ENSMUST00000113449 6924 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
H3f3cP02301 Klhdc8b-207ENSMUST00000193286 2956 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
H3f3cP02301 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
H3f3cP02301 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
H3f3cP02301 Cul7-201ENSMUST00000043464 5530 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
H3f3cP02301 Usp42-201ENSMUST00000053287 5151 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.38
H3f3cP02301 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC12.71□□□□□ -0.38
H3f3cP02301 Srsf10-202ENSMUST00000097844 3055 ntAPPRIS ALT1 TSL 2 BASIC12.7□□□□□ -0.38
H3f3cP02301 Gm45133-201ENSMUST00000207548 2773 ntBASIC12.7□□□□□ -0.38
H3f3cP02301 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
H3f3cP02301 Rai2-202ENSMUST00000112338 2165 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
H3f3cP02301 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
H3f3cP02301 Cacna2d1-205ENSMUST00000167946 7436 ntAPPRIS ALT1 TSL 5 BASIC12.7□□□□□ -0.38
H3f3cP02301 Mctp1-204ENSMUST00000125209 4715 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
H3f3cP02301 Frmd4b-203ENSMUST00000113355 4913 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
H3f3cP02301 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC12.7□□□□□ -0.38
H3f3cP02301 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
H3f3cP02301 Kdm5c-202ENSMUST00000112584 5900 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 23.8 ms