Protein–RNA interactions for Protein: O88935

Syn1, Synapsin-1, mousemouse

Predictions only

Length 706 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syn1O88935 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Syn1O88935 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Syn1O88935 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Syn1O88935 Tppp3-203ENSMUST00000177126 1396 ntAPPRIS P1 TSL 3 BASIC15.21■□□□□ 0.02
Syn1O88935 Slco3a1-202ENSMUST00000098371 2709 ntAPPRIS ALT1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Syn1O88935 Gm6756-201ENSMUST00000180647 1620 ntBASIC15.21■□□□□ 0.02
Syn1O88935 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.02
Syn1O88935 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
Syn1O88935 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Syn1O88935 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Syn1O88935 P2rx3-203ENSMUST00000111616 1315 ntTSL 5 BASIC15.2■□□□□ 0.02
Syn1O88935 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC15.2■□□□□ 0.02
Syn1O88935 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC15.2■□□□□ 0.02
Syn1O88935 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Syn1O88935 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC15.2■□□□□ 0.02
Syn1O88935 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Syn1O88935 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Syn1O88935 Sirt3-202ENSMUST00000106048 1416 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Syn1O88935 Gm36445-201ENSMUST00000209344 1432 ntTSL 5 BASIC15.2■□□□□ 0.02
Syn1O88935 Fbxl5-207ENSMUST00000124610 2306 ntTSL 5 BASIC15.2■□□□□ 0.02
Syn1O88935 Gm13589-201ENSMUST00000146404 1675 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Syn1O88935 Adora2a-201ENSMUST00000105420 2596 ntAPPRIS P1 TSL 3 BASIC15.2■□□□□ 0.02
Syn1O88935 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Syn1O88935 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Syn1O88935 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Syn1O88935 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
Syn1O88935 Endou-202ENSMUST00000100249 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Syn1O88935 3110009E18Rik-203ENSMUST00000112644 488 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Syn1O88935 Mir1247-201ENSMUST00000116706 82 ntBASIC15.2■□□□□ 0.02
Syn1O88935 E130218I03Rik-203ENSMUST00000125921 666 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
Syn1O88935 E130218I03Rik-207ENSMUST00000143448 591 ntAPPRIS P1 TSL 3 BASIC15.2■□□□□ 0.02
Syn1O88935 Gm17634-201ENSMUST00000181383 1285 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Syn1O88935 Evpl-201ENSMUST00000037007 6384 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
Syn1O88935 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
Syn1O88935 Gm9200-201ENSMUST00000118513 1354 ntBASIC15.2■□□□□ 0.02
Syn1O88935 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Syn1O88935 Zfp647-201ENSMUST00000048854 1608 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Syn1O88935 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Syn1O88935 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Syn1O88935 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Syn1O88935 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Syn1O88935 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Syn1O88935 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Syn1O88935 Rita1-201ENSMUST00000031599 1573 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Syn1O88935 Spryd4-201ENSMUST00000061995 1583 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Syn1O88935 Papd5-202ENSMUST00000118952 4597 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Syn1O88935 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
Syn1O88935 Mark2-209ENSMUST00000165965 2874 ntAPPRIS P4 TSL 1 (best) BASIC15.19■□□□□ 0.02
Syn1O88935 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Syn1O88935 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Syn1O88935 Ap1g1-202ENSMUST00000093157 6899 ntAPPRIS P3 TSL 5 BASIC15.19■□□□□ 0.02
Syn1O88935 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Syn1O88935 Galnt13-203ENSMUST00000112635 7531 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Syn1O88935 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Syn1O88935 Park7-205ENSMUST00000105676 582 ntTSL 5 BASIC15.19■□□□□ 0.02
Syn1O88935 Zfp74-203ENSMUST00000108211 1278 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Syn1O88935 Gm5303-201ENSMUST00000117943 1252 ntBASIC15.19■□□□□ 0.02
Syn1O88935 Syce3-202ENSMUST00000167959 480 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Syn1O88935 Mir3102-201ENSMUST00000175555 104 ntBASIC15.19■□□□□ 0.02
Syn1O88935 C030018K13Rik-202ENSMUST00000196829 712 ntTSL 3 BASIC15.19■□□□□ 0.02
Syn1O88935 Gm44756-201ENSMUST00000206172 1069 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Syn1O88935 Gm40193-201ENSMUST00000209971 237 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
Syn1O88935 AC159474.1-201ENSMUST00000218454 374 ntTSL 3 BASIC15.19■□□□□ 0.02
Syn1O88935 Smim11-201ENSMUST00000063641 517 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Syn1O88935 Prr23a2-201ENSMUST00000071302 881 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
Syn1O88935 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
Syn1O88935 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Syn1O88935 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Syn1O88935 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Syn1O88935 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Syn1O88935 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Syn1O88935 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Syn1O88935 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Syn1O88935 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Syn1O88935 Keap1-201ENSMUST00000049567 3172 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Syn1O88935 Fam149b-211ENSMUST00000224930 2716 ntAPPRIS ALT2 BASIC15.18■□□□□ 0.02
Syn1O88935 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Syn1O88935 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Syn1O88935 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Syn1O88935 Cnot10-206ENSMUST00000216785 1723 ntTSL 5 BASIC15.18■□□□□ 0.02
Syn1O88935 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Syn1O88935 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC15.18■□□□□ 0.02
Syn1O88935 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
Syn1O88935 Aurkaip1-202ENSMUST00000105591 773 ntAPPRIS P1 TSL 3 BASIC15.18■□□□□ 0.02
Syn1O88935 Sumo2-204ENSMUST00000118155 884 ntTSL 2 BASIC15.18■□□□□ 0.02
Syn1O88935 Rps19-ps13-201ENSMUST00000180504 441 ntBASIC15.18■□□□□ 0.02
Syn1O88935 H2-Bl-210ENSMUST00000195833 829 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Syn1O88935 AC154171.1-201ENSMUST00000224610 643 ntBASIC15.18■□□□□ 0.02
Syn1O88935 Tlcd2-201ENSMUST00000043598 1153 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
Syn1O88935 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Syn1O88935 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Syn1O88935 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
Syn1O88935 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Syn1O88935 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Syn1O88935 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
Syn1O88935 Adamts19-201ENSMUST00000052907 4666 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Syn1O88935 AC131743.5-201ENSMUST00000220775 1618 ntBASIC15.17■□□□□ 0.02
Syn1O88935 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Syn1O88935 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Syn1O88935 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 32.8 ms