Protein–RNA interactions for Protein: O88705

Hcn3, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 3, mousemouse

Predictions only

Length 779 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hcn3O88705 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Hcn3O88705 Plch2-208ENSMUST00000145662 1818 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Hcn3O88705 Cpne6-202ENSMUST00000163767 2004 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Hcn3O88705 Irf7-203ENSMUST00000106023 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Hcn3O88705 Hsph1-211ENSMUST00000202361 3802 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Hcn3O88705 Ubiad1-201ENSMUST00000051633 2992 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Hcn3O88705 Cblb-204ENSMUST00000227062 3728 ntAPPRIS P2 BASIC14.22□□□□□ -0.13
Hcn3O88705 AC121805.2-201ENSMUST00000218808 2538 ntBASIC14.21□□□□□ -0.13
Hcn3O88705 Anks1-203ENSMUST00000114842 5610 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
Hcn3O88705 Gars-201ENSMUST00000003572 2380 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Hcn3O88705 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Hcn3O88705 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Hcn3O88705 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Hcn3O88705 Gm9103-201ENSMUST00000119371 405 ntBASIC14.21□□□□□ -0.13
Hcn3O88705 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Hcn3O88705 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC14.21□□□□□ -0.13
Hcn3O88705 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Hcn3O88705 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC14.21□□□□□ -0.13
Hcn3O88705 Ssh3-202ENSMUST00000113852 2735 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Hcn3O88705 Ssh3-201ENSMUST00000037992 2728 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Hcn3O88705 Dnase1l1-201ENSMUST00000019232 1625 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Hcn3O88705 Sufu-203ENSMUST00000118440 2663 ntTSL 5 BASIC14.21□□□□□ -0.13
Hcn3O88705 Rxrb-202ENSMUST00000116612 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
Hcn3O88705 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Hcn3O88705 Ak1-202ENSMUST00000113277 2063 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Hcn3O88705 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Hcn3O88705 Ccnf-201ENSMUST00000115390 3099 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Hcn3O88705 Cdh7-206ENSMUST00000137092 2681 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Hcn3O88705 Mindy3-201ENSMUST00000028105 2344 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Hcn3O88705 Lin54-201ENSMUST00000046154 4451 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Hcn3O88705 Slc4a1ap-213ENSMUST00000202950 2499 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Hcn3O88705 1110008P14Rik-202ENSMUST00000146423 2618 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Hcn3O88705 Gtf2ird1-201ENSMUST00000073161 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Hcn3O88705 Mavs-202ENSMUST00000110199 3057 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Hcn3O88705 Cobl-208ENSMUST00000172919 2566 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Hcn3O88705 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Hcn3O88705 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Hcn3O88705 Gm44454-201ENSMUST00000198541 138 ntBASIC14.2□□□□□ -0.14
Hcn3O88705 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Hcn3O88705 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC14.2□□□□□ -0.14
Hcn3O88705 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Hcn3O88705 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC14.2□□□□□ -0.14
Hcn3O88705 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Hcn3O88705 Gng4-201ENSMUST00000021734 3179 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Hcn3O88705 Lrriq4-202ENSMUST00000108267 2387 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Hcn3O88705 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC14.2□□□□□ -0.14
Hcn3O88705 Prkab2-201ENSMUST00000045743 5006 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Hcn3O88705 Zfp169-203ENSMUST00000176176 2162 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Hcn3O88705 Runx2-202ENSMUST00000113571 5898 ntAPPRIS P3 TSL 5 BASIC14.2□□□□□ -0.14
Hcn3O88705 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Hcn3O88705 Tjap1-211ENSMUST00000225080 2412 ntAPPRIS P2 BASIC14.2□□□□□ -0.14
Hcn3O88705 Hoxa3-201ENSMUST00000114434 2591 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Hcn3O88705 Sept12-201ENSMUST00000170323 2576 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Hcn3O88705 Mtrr-209ENSMUST00000223398 3861 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Hcn3O88705 Klhl12-203ENSMUST00000116528 3277 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Hcn3O88705 Ssr1-204ENSMUST00000225319 1610 ntBASIC14.19□□□□□ -0.14
Hcn3O88705 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC14.19□□□□□ -0.14
Hcn3O88705 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Hcn3O88705 Ripor2-201ENSMUST00000038477 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Hcn3O88705 Psap-202ENSMUST00000105465 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Hcn3O88705 4932422M17Rik-201ENSMUST00000195992 2639 ntBASIC14.19□□□□□ -0.14
Hcn3O88705 Cct4-204ENSMUST00000173867 2484 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Hcn3O88705 S100pbp-204ENSMUST00000106061 4426 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Hcn3O88705 Rps6ka5-201ENSMUST00000043599 4406 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Hcn3O88705 4632428C04Rik-201ENSMUST00000181485 2430 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Hcn3O88705 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC14.19□□□□□ -0.14
Hcn3O88705 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Hcn3O88705 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Hcn3O88705 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC14.19□□□□□ -0.14
Hcn3O88705 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC14.19□□□□□ -0.14
Hcn3O88705 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC14.19□□□□□ -0.14
Hcn3O88705 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC14.19□□□□□ -0.14
Hcn3O88705 AC153889.1-201ENSMUST00000219257 330 ntBASIC14.19□□□□□ -0.14
Hcn3O88705 Neurl1a-201ENSMUST00000111807 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Hcn3O88705 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Hcn3O88705 Zfp865-201ENSMUST00000076251 7503 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Hcn3O88705 Ints3-202ENSMUST00000071488 4038 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Hcn3O88705 Aarsd1-201ENSMUST00000070395 1516 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Hcn3O88705 Sgce-202ENSMUST00000090686 1547 ntTSL 5 BASIC14.19□□□□□ -0.14
Hcn3O88705 Fut7-202ENSMUST00000100320 2076 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Hcn3O88705 Sun1-202ENSMUST00000078690 2608 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Hcn3O88705 Nxpe5-202ENSMUST00000159798 2568 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Hcn3O88705 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Hcn3O88705 Lipe-202ENSMUST00000054301 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Hcn3O88705 Clip2-201ENSMUST00000036999 4893 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Hcn3O88705 Echdc1-202ENSMUST00000160399 1845 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Hcn3O88705 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Hcn3O88705 Gm26840-201ENSMUST00000180784 2980 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Hcn3O88705 Vav1-201ENSMUST00000005889 2963 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Hcn3O88705 Gm21009-201ENSMUST00000197169 1669 ntBASIC14.18□□□□□ -0.14
Hcn3O88705 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC14.18□□□□□ -0.14
Hcn3O88705 Cacnb4-201ENSMUST00000078324 8225 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Hcn3O88705 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Hcn3O88705 Rab9b-201ENSMUST00000058814 3980 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Hcn3O88705 Cbs-202ENSMUST00000078509 2403 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Hcn3O88705 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC14.18□□□□□ -0.14
Hcn3O88705 Gm12895-201ENSMUST00000122214 226 ntBASIC14.18□□□□□ -0.14
Hcn3O88705 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC14.18□□□□□ -0.14
Hcn3O88705 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC14.18□□□□□ -0.14
Hcn3O88705 Gm28033-201ENSMUST00000184224 96 ntBASIC14.18□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 41.6 ms