Protein–RNA interactions for Protein: O88551

Cldn1, Claudin-1, mousemouse

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn1O88551 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Cldn1O88551 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Cldn1O88551 Ttc3-201ENSMUST00000117648 7417 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Cldn1O88551 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Cldn1O88551 Trmu-201ENSMUST00000023019 1526 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cldn1O88551 Slc30a2-201ENSMUST00000081094 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cldn1O88551 Wnk1-223ENSMUST00000177761 11303 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Cldn1O88551 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cldn1O88551 Mfng-201ENSMUST00000018313 1865 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cldn1O88551 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cldn1O88551 Pltp-201ENSMUST00000059954 1809 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cldn1O88551 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cldn1O88551 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cldn1O88551 Rrp8-201ENSMUST00000033179 3053 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cldn1O88551 Syt3-201ENSMUST00000118831 2627 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Cldn1O88551 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cldn1O88551 Gm7488-201ENSMUST00000117148 684 ntBASIC12.72□□□□□ -0.37
Cldn1O88551 Gm8410-201ENSMUST00000117225 605 ntBASIC12.72□□□□□ -0.37
Cldn1O88551 Tpm3-203ENSMUST00000119158 1090 ntTSL 3 BASIC12.72□□□□□ -0.37
Cldn1O88551 Hras-203ENSMUST00000124314 1073 ntTSL 5 BASIC12.72□□□□□ -0.37
Cldn1O88551 Pkig-209ENSMUST00000164399 983 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
Cldn1O88551 Tmem61-202ENSMUST00000177702 561 ntTSL 5 BASIC12.72□□□□□ -0.37
Cldn1O88551 Rpl32-202ENSMUST00000203816 906 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
Cldn1O88551 AC135669.1-201ENSMUST00000213585 412 ntBASIC12.72□□□□□ -0.37
Cldn1O88551 AC151828.1-201ENSMUST00000219552 661 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Cldn1O88551 Myl6b-201ENSMUST00000026428 1026 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cldn1O88551 Lce1g-201ENSMUST00000029527 925 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cldn1O88551 Rnf217-201ENSMUST00000081989 11013 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Cldn1O88551 Mybl1-201ENSMUST00000088658 4980 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cldn1O88551 Ctdp1-201ENSMUST00000036229 3713 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cldn1O88551 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cldn1O88551 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Cldn1O88551 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cldn1O88551 Sept8-202ENSMUST00000117061 4563 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cldn1O88551 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC12.72□□□□□ -0.37
Cldn1O88551 Gm5096-201ENSMUST00000091776 1858 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
Cldn1O88551 Sirpa-202ENSMUST00000099113 3342 ntTSL 3 BASIC12.72□□□□□ -0.37
Cldn1O88551 Mtcl1-211ENSMUST00000177034 5441 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
Cldn1O88551 Adamts7-201ENSMUST00000113059 5379 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
Cldn1O88551 Sbk2-205ENSMUST00000208109 1422 ntTSL 5 BASIC12.71□□□□□ -0.37
Cldn1O88551 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Cldn1O88551 Kif21b-201ENSMUST00000075164 9115 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.37
Cldn1O88551 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Cldn1O88551 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Cldn1O88551 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Cldn1O88551 Fbxo8-202ENSMUST00000110322 1709 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Cldn1O88551 Itfg2-206ENSMUST00000203374 1394 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
Cldn1O88551 Adipor1-202ENSMUST00000112237 3446 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Cldn1O88551 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC12.71□□□□□ -0.37
Cldn1O88551 Scrt1-201ENSMUST00000096365 4010 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Cldn1O88551 AC130669.1-201ENSMUST00000228537 1672 ntBASIC12.71□□□□□ -0.37
Cldn1O88551 Adam23-204ENSMUST00000114103 2655 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
Cldn1O88551 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Cldn1O88551 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Cldn1O88551 Abhd15-201ENSMUST00000094004 2662 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Cldn1O88551 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Cldn1O88551 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Cldn1O88551 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Cldn1O88551 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Cldn1O88551 H60b-201ENSMUST00000105522 1029 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Cldn1O88551 Dusp13-203ENSMUST00000120956 1070 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Cldn1O88551 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Cldn1O88551 Gm16215-201ENSMUST00000161990 637 ntBASIC12.71□□□□□ -0.37
Cldn1O88551 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Cldn1O88551 Mpv17-207ENSMUST00000201491 923 ntTSL 2 BASIC12.71□□□□□ -0.37
Cldn1O88551 Gm44855-201ENSMUST00000205725 362 ntBASIC12.71□□□□□ -0.37
Cldn1O88551 Idh2-207ENSMUST00000206714 392 ntTSL 3 BASIC12.71□□□□□ -0.37
Cldn1O88551 1700128F08Rik-202ENSMUST00000213708 717 ntBASIC12.71□□□□□ -0.37
Cldn1O88551 AC132467.2-202ENSMUST00000227726 559 ntBASIC12.71□□□□□ -0.37
Cldn1O88551 Syt7-205ENSMUST00000224135 1557 ntBASIC12.71□□□□□ -0.37
Cldn1O88551 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Cldn1O88551 Ncf1-201ENSMUST00000016094 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Cldn1O88551 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Cldn1O88551 Chrna4-202ENSMUST00000108851 2071 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.38
Cldn1O88551 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC12.71□□□□□ -0.38
Cldn1O88551 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC12.71□□□□□ -0.38
Cldn1O88551 Gm26560-201ENSMUST00000181240 2619 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Cldn1O88551 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Cldn1O88551 Mesd-201ENSMUST00000094215 4492 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cldn1O88551 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC12.7□□□□□ -0.38
Cldn1O88551 Chd4-203ENSMUST00000112392 6652 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
Cldn1O88551 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cldn1O88551 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cldn1O88551 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cldn1O88551 Akirin2-201ENSMUST00000084299 1397 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cldn1O88551 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Cldn1O88551 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Cldn1O88551 Ccdc154-201ENSMUST00000073277 2417 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
Cldn1O88551 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cldn1O88551 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Cldn1O88551 Anxa3-201ENSMUST00000031447 1595 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cldn1O88551 Tmem88-201ENSMUST00000050140 1582 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cldn1O88551 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cldn1O88551 Hectd1-202ENSMUST00000179265 9012 ntTSL 5 BASIC12.7□□□□□ -0.38
Cldn1O88551 Slpi-201ENSMUST00000109367 876 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cldn1O88551 Dph3-205ENSMUST00000124303 809 ntTSL 2 BASIC12.7□□□□□ -0.38
Cldn1O88551 Med22-201ENSMUST00000015920 973 ntAPPRIS P4 TSL 2 BASIC12.7□□□□□ -0.38
Cldn1O88551 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cldn1O88551 Ift27-201ENSMUST00000016781 1012 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cldn1O88551 Gm9824-201ENSMUST00000178707 561 ntBASIC12.7□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 53.4 ms