Protein–RNA interactions for Protein: O88545

Cops6, COP9 signalosome complex subunit 6, mousemouse

Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cops6O88545 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Cops6O88545 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Cops6O88545 Fam184a-201ENSMUST00000020003 4164 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
Cops6O88545 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Cops6O88545 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Cops6O88545 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Cops6O88545 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Cops6O88545 Vav1-204ENSMUST00000169220 2810 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Cops6O88545 Prkg1-206ENSMUST00000182685 1628 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Cops6O88545 Gfpt1-202ENSMUST00000113655 1255 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Cops6O88545 Gm6222-201ENSMUST00000120787 396 ntBASIC18.03■□□□□ 0.48
Cops6O88545 Mansc4-202ENSMUST00000123367 542 ntAPPRIS ALT2 TSL 2 BASIC18.03■□□□□ 0.48
Cops6O88545 Rpl34-203ENSMUST00000133802 711 ntTSL 2 BASIC18.03■□□□□ 0.48
Cops6O88545 Cd63-ps-201ENSMUST00000145417 875 ntBASIC18.03■□□□□ 0.48
Cops6O88545 H2-Pa-201ENSMUST00000182803 626 ntBASIC18.03■□□□□ 0.48
Cops6O88545 Cartpt-201ENSMUST00000022150 827 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Cops6O88545 Cartpt-202ENSMUST00000224142 1238 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
Cops6O88545 AC149588.3-201ENSMUST00000227515 150 ntBASIC18.03■□□□□ 0.48
Cops6O88545 Mesp1-201ENSMUST00000032760 1275 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Cops6O88545 Casp16-ps-201ENSMUST00000088673 531 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
Cops6O88545 Hps1-201ENSMUST00000026194 2647 ntAPPRIS P3 TSL 5 BASIC18.03■□□□□ 0.48
Cops6O88545 Snx8-205ENSMUST00000196566 1914 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
Cops6O88545 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Cops6O88545 Zkscan3-208ENSMUST00000224820 5398 ntBASIC18.03■□□□□ 0.48
Cops6O88545 Jup-202ENSMUST00000107403 2386 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
Cops6O88545 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Cops6O88545 Tfap2a-203ENSMUST00000223869 2037 ntBASIC18.03■□□□□ 0.48
Cops6O88545 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Cops6O88545 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Cops6O88545 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Cops6O88545 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Cops6O88545 Pla2g2e-202ENSMUST00000105803 381 ntTSL 5 BASIC18.02■□□□□ 0.48
Cops6O88545 Ppcs-202ENSMUST00000106316 954 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Cops6O88545 Aen-201ENSMUST00000107421 2007 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Cops6O88545 Rgs19-203ENSMUST00000108771 1110 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Cops6O88545 Rgs19-205ENSMUST00000108776 1216 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Cops6O88545 Gm4204-201ENSMUST00000110798 1231 ntBASIC18.02■□□□□ 0.48
Cops6O88545 Stra8-202ENSMUST00000114997 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Cops6O88545 Nudcd2-203ENSMUST00000127382 727 ntTSL 2 BASIC18.02■□□□□ 0.48
Cops6O88545 Gm39244-202ENSMUST00000210837 1857 ntTSL 5 BASIC18.02■□□□□ 0.48
Cops6O88545 Dupd1-202ENSMUST00000224735 548 ntBASIC18.02■□□□□ 0.48
Cops6O88545 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Cops6O88545 Pdlim7-203ENSMUST00000069968 1006 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Cops6O88545 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Cops6O88545 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
Cops6O88545 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC18.02■□□□□ 0.47
Cops6O88545 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.47
Cops6O88545 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.47
Cops6O88545 Map3k12-207ENSMUST00000169377 4210 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Cops6O88545 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Cops6O88545 2610028D06Rik-201ENSMUST00000215216 1713 ntBASIC18.01■□□□□ 0.47
Cops6O88545 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Cops6O88545 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Cops6O88545 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Cops6O88545 Gm16011-201ENSMUST00000121567 2662 ntBASIC18.01■□□□□ 0.47
Cops6O88545 Gatsl3-201ENSMUST00000020699 1574 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Cops6O88545 Gale-202ENSMUST00000102541 1430 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Cops6O88545 Sirt3-202ENSMUST00000106048 1416 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Cops6O88545 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Cops6O88545 Tpt1-ps6-201ENSMUST00000121768 523 ntBASIC18.01■□□□□ 0.47
Cops6O88545 Gltpd2-202ENSMUST00000179000 794 ntAPPRIS ALT2 TSL 2 BASIC18.01■□□□□ 0.47
Cops6O88545 Gm5745-201ENSMUST00000183748 313 ntBASIC18.01■□□□□ 0.47
Cops6O88545 Gm44855-201ENSMUST00000205725 362 ntBASIC18.01■□□□□ 0.47
Cops6O88545 Tex12-202ENSMUST00000217236 1003 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Cops6O88545 Gm9182-201ENSMUST00000217829 639 ntBASIC18.01■□□□□ 0.47
Cops6O88545 AC124732.1-201ENSMUST00000221551 910 ntBASIC18.01■□□□□ 0.47
Cops6O88545 Gm12866-201ENSMUST00000128998 1671 ntTSL 2 BASIC18.01■□□□□ 0.47
Cops6O88545 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
Cops6O88545 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Cops6O88545 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Cops6O88545 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
Cops6O88545 Klhl26-204ENSMUST00000209567 2615 ntTSL 3 BASIC18.01■□□□□ 0.47
Cops6O88545 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Cops6O88545 5730559C18Rik-201ENSMUST00000120339 2988 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Cops6O88545 Gpx3-201ENSMUST00000082430 1594 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Cops6O88545 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Cops6O88545 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC18■□□□□ 0.47
Cops6O88545 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Cops6O88545 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC18■□□□□ 0.47
Cops6O88545 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC18■□□□□ 0.47
Cops6O88545 Slc22a7-201ENSMUST00000087012 2007 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Cops6O88545 Tubg2-201ENSMUST00000043654 1754 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Cops6O88545 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Cops6O88545 Gm7488-201ENSMUST00000117148 684 ntBASIC18■□□□□ 0.47
Cops6O88545 Rpl17-ps10-201ENSMUST00000119383 555 ntBASIC18■□□□□ 0.47
Cops6O88545 Rpl17-ps9-201ENSMUST00000119541 555 ntBASIC18■□□□□ 0.47
Cops6O88545 Rpl17-ps4-201ENSMUST00000120241 555 ntBASIC18■□□□□ 0.47
Cops6O88545 1700110K17Rik-202ENSMUST00000156511 927 ntTSL 1 (best) BASIC18■□□□□ 0.47
Cops6O88545 Pfdn6-204ENSMUST00000174048 560 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
Cops6O88545 Gm46209-201ENSMUST00000217912 553 ntBASIC18■□□□□ 0.47
Cops6O88545 Ramp3-201ENSMUST00000045374 1233 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Cops6O88545 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC18■□□□□ 0.47
Cops6O88545 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
Cops6O88545 Dock1-206ENSMUST00000211593 2589 ntTSL 1 (best) BASIC18■□□□□ 0.47
Cops6O88545 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Cops6O88545 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC18■□□□□ 0.47
Cops6O88545 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Cops6O88545 Gtf2e2-201ENSMUST00000167264 1566 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Cops6O88545 Syt7-205ENSMUST00000224135 1557 ntBASIC18■□□□□ 0.47
Cops6O88545 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 32.5 ms