Protein–RNA interactions for Protein: O88509

Dnmt3b, DNA (cytosine-5)-methyltransferase 3B, mousemouse

Predictions only

Length 859 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Dnmt3bO88509 Ppp2r5b-201ENSMUST00000025695 2742 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Dnmt3bO88509 Rasal3-207ENSMUST00000137458 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Dnmt3bO88509 Dnajb12-205ENSMUST00000147914 3041 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Dnmt3bO88509 Gnl3-201ENSMUST00000037739 1947 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Dnmt3bO88509 Lipo3-201ENSMUST00000025694 2768 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Dnmt3bO88509 Cacna1i-202ENSMUST00000160424 9781 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Dnmt3bO88509 Gm17315-201ENSMUST00000181408 2504 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Dnmt3bO88509 Aim2-202ENSMUST00000147604 2839 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Dnmt3bO88509 Alox5-201ENSMUST00000026795 2821 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Dnmt3bO88509 Mapk8ip3-201ENSMUST00000088345 5543 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Dnmt3bO88509 Celf4-207ENSMUST00000225477 2626 ntAPPRIS P3 BASIC14.32□□□□□ -0.12
Dnmt3bO88509 Rgs14-201ENSMUST00000063771 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Dnmt3bO88509 Map4k5-202ENSMUST00000110567 4250 ntTSL 5 BASIC14.32□□□□□ -0.12
Dnmt3bO88509 Flt3-201ENSMUST00000049324 3657 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Dnmt3bO88509 Grid2-201ENSMUST00000095852 5860 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Dnmt3bO88509 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Dnmt3bO88509 Klk7-201ENSMUST00000032955 1895 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Dnmt3bO88509 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Dnmt3bO88509 Nr3c2-203ENSMUST00000109912 5675 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Dnmt3bO88509 Gm7222-201ENSMUST00000117512 906 ntBASIC14.32□□□□□ -0.12
Dnmt3bO88509 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Dnmt3bO88509 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Dnmt3bO88509 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC14.32□□□□□ -0.12
Dnmt3bO88509 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC14.32□□□□□ -0.12
Dnmt3bO88509 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC14.32□□□□□ -0.12
Dnmt3bO88509 AC151286.1-201ENSMUST00000198489 145 ntBASIC14.32□□□□□ -0.12
Dnmt3bO88509 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Dnmt3bO88509 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC14.32□□□□□ -0.12
Dnmt3bO88509 Gm31545-201ENSMUST00000209358 1219 ntTSL 5 BASIC14.32□□□□□ -0.12
Dnmt3bO88509 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Dnmt3bO88509 Evpl-201ENSMUST00000037007 6384 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
Dnmt3bO88509 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Dnmt3bO88509 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Dnmt3bO88509 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Dnmt3bO88509 Col9a2-201ENSMUST00000030372 2924 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Dnmt3bO88509 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Dnmt3bO88509 N4bp3-201ENSMUST00000001080 2367 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Dnmt3bO88509 Tagap1-201ENSMUST00000063683 2358 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Dnmt3bO88509 Tead1-201ENSMUST00000059768 9964 ntAPPRIS P4 TSL 1 (best) BASIC14.32□□□□□ -0.12
Dnmt3bO88509 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Dnmt3bO88509 Eef1e1-201ENSMUST00000001757 2553 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Dnmt3bO88509 Sipa1l1-202ENSMUST00000166429 8215 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Dnmt3bO88509 Nop56-202ENSMUST00000103198 1877 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Dnmt3bO88509 Rnf4-207ENSMUST00000182709 3046 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Dnmt3bO88509 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Dnmt3bO88509 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Dnmt3bO88509 Nfatc4-204ENSMUST00000226357 2680 ntAPPRIS ALT2 BASIC14.31□□□□□ -0.12
Dnmt3bO88509 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Dnmt3bO88509 Slmap-203ENSMUST00000102956 5476 ntAPPRIS P3 TSL 5 BASIC14.31□□□□□ -0.12
Dnmt3bO88509 Hoxc4-201ENSMUST00000100164 1983 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Dnmt3bO88509 Pak1-205ENSMUST00000206984 2794 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Dnmt3bO88509 3110082I17Rik-204ENSMUST00000198474 2030 ntTSL 2 BASIC14.31□□□□□ -0.12
Dnmt3bO88509 Pcsk4-201ENSMUST00000020340 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Dnmt3bO88509 Gm4995-201ENSMUST00000117247 432 ntBASIC14.31□□□□□ -0.12
Dnmt3bO88509 C530008M17Rik-205ENSMUST00000121851 1165 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Dnmt3bO88509 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC14.31□□□□□ -0.12
Dnmt3bO88509 Gm26517-201ENSMUST00000181279 1172 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Dnmt3bO88509 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Dnmt3bO88509 Fam71e1-204ENSMUST00000205422 366 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Dnmt3bO88509 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Dnmt3bO88509 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Dnmt3bO88509 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Dnmt3bO88509 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Dnmt3bO88509 Rhbdl1-202ENSMUST00000183929 1349 ntTSL 5 BASIC14.31□□□□□ -0.12
Dnmt3bO88509 Rasa4-202ENSMUST00000100570 2660 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Dnmt3bO88509 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Dnmt3bO88509 Rnf180-203ENSMUST00000224662 2734 ntAPPRIS ALT2 BASIC14.31□□□□□ -0.12
Dnmt3bO88509 Cadps2-206ENSMUST00000115361 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Dnmt3bO88509 Dnajb5-204ENSMUST00000107973 2300 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Dnmt3bO88509 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC14.31□□□□□ -0.12
Dnmt3bO88509 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Dnmt3bO88509 Marveld3-202ENSMUST00000051430 2447 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Dnmt3bO88509 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Dnmt3bO88509 Rbm47-201ENSMUST00000094756 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Dnmt3bO88509 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Dnmt3bO88509 Pcyox1l-201ENSMUST00000025472 2017 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Dnmt3bO88509 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Dnmt3bO88509 Gtf2ird1-205ENSMUST00000100654 3156 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Dnmt3bO88509 Phactr3-203ENSMUST00000108915 2694 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Dnmt3bO88509 Phactr3-204ENSMUST00000108916 2656 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Dnmt3bO88509 Pxdn-201ENSMUST00000118321 2698 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Dnmt3bO88509 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Dnmt3bO88509 Zfp784-201ENSMUST00000062428 2153 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Dnmt3bO88509 Aste1-201ENSMUST00000035181 2755 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Dnmt3bO88509 Ppp1r15a-202ENSMUST00000167273 2809 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
Dnmt3bO88509 Hnrnpa3-202ENSMUST00000111961 1734 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Dnmt3bO88509 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC14.3□□□□□ -0.12
Dnmt3bO88509 Baz1b-201ENSMUST00000002825 6492 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Dnmt3bO88509 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Dnmt3bO88509 Vsig10-202ENSMUST00000111967 4236 ntAPPRIS P2 TSL 5 BASIC14.3□□□□□ -0.12
Dnmt3bO88509 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Dnmt3bO88509 Gm44081-201ENSMUST00000204406 643 ntTSL 3 BASIC14.3□□□□□ -0.12
Dnmt3bO88509 Vsig2-206ENSMUST00000215957 851 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Dnmt3bO88509 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Dnmt3bO88509 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC14.3□□□□□ -0.12
Dnmt3bO88509 Msantd3-202ENSMUST00000064807 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Dnmt3bO88509 Eda-206ENSMUST00000113779 4955 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Dnmt3bO88509 Kpna6-201ENSMUST00000003828 2195 ntAPPRIS ALT1 TSL 5 BASIC14.3□□□□□ -0.12
Dnmt3bO88509 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Dnmt3bO88509 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 34.6 ms