Protein–RNA interactions for Protein: O88393

Tgfbr3, Transforming growth factor beta receptor type 3, mousemouse

Predictions only

Length 850 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tgfbr3O88393 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Tgfbr3O88393 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Tgfbr3O88393 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Tgfbr3O88393 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Tgfbr3O88393 Tcf21-202ENSMUST00000218002 1788 ntBASIC14.04□□□□□ -0.16
Tgfbr3O88393 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Tgfbr3O88393 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Tgfbr3O88393 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Tgfbr3O88393 Zmym3-201ENSMUST00000063577 6057 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Tgfbr3O88393 Nptn-201ENSMUST00000085651 2024 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Tgfbr3O88393 Gm13425-201ENSMUST00000145389 5391 ntTSL 3 BASIC14.04□□□□□ -0.16
Tgfbr3O88393 Mmab-202ENSMUST00000112245 644 ntTSL 3 BASIC14.04□□□□□ -0.16
Tgfbr3O88393 Cmss1-201ENSMUST00000114371 930 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Tgfbr3O88393 Tmem128-202ENSMUST00000119047 726 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Tgfbr3O88393 Rpl17-ps10-201ENSMUST00000119383 555 ntBASIC14.04□□□□□ -0.16
Tgfbr3O88393 Rpl17-ps9-201ENSMUST00000119541 555 ntBASIC14.04□□□□□ -0.16
Tgfbr3O88393 Rpl17-ps4-201ENSMUST00000120241 555 ntBASIC14.04□□□□□ -0.16
Tgfbr3O88393 BC023719-201ENSMUST00000174728 978 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Tgfbr3O88393 Lamtor1-202ENSMUST00000193465 661 ntTSL 5 BASIC14.04□□□□□ -0.16
Tgfbr3O88393 Letm2-213ENSMUST00000211422 738 ntTSL 5 BASIC14.04□□□□□ -0.16
Tgfbr3O88393 Gm46209-201ENSMUST00000217912 553 ntBASIC14.04□□□□□ -0.16
Tgfbr3O88393 Treml1-204ENSMUST00000224001 1220 ntAPPRIS P2 BASIC14.04□□□□□ -0.16
Tgfbr3O88393 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Tgfbr3O88393 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Tgfbr3O88393 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
Tgfbr3O88393 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC14.04□□□□□ -0.16
Tgfbr3O88393 Fahd1-201ENSMUST00000049642 1407 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
Tgfbr3O88393 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC14.04□□□□□ -0.16
Tgfbr3O88393 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Tgfbr3O88393 Zfp668-201ENSMUST00000054415 5768 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Tgfbr3O88393 Gm17396-201ENSMUST00000172075 1655 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Tgfbr3O88393 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Tgfbr3O88393 Mob4-202ENSMUST00000159311 1816 ntTSL 3 BASIC14.04□□□□□ -0.16
Tgfbr3O88393 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Tgfbr3O88393 3110082I17Rik-204ENSMUST00000198474 2030 ntTSL 2 BASIC14.03□□□□□ -0.16
Tgfbr3O88393 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Tgfbr3O88393 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Tgfbr3O88393 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Tgfbr3O88393 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Tgfbr3O88393 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Tgfbr3O88393 Ablim2-202ENSMUST00000101280 3042 ntTSL 5 BASIC14.03□□□□□ -0.16
Tgfbr3O88393 Ctnnbip1-202ENSMUST00000105692 634 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Tgfbr3O88393 Gm14127-201ENSMUST00000117906 678 ntBASIC14.03□□□□□ -0.16
Tgfbr3O88393 Gm4875-201ENSMUST00000118257 786 ntBASIC14.03□□□□□ -0.16
Tgfbr3O88393 Cdpf1-202ENSMUST00000125947 706 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
Tgfbr3O88393 A530058N18Rik-202ENSMUST00000134129 411 ntTSL 3 BASIC14.03□□□□□ -0.16
Tgfbr3O88393 1700121C08Rik-201ENSMUST00000137546 677 ntTSL 3 BASIC14.03□□□□□ -0.16
Tgfbr3O88393 Ssty1-201ENSMUST00000180056 699 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Tgfbr3O88393 4833428L15Rik-201ENSMUST00000181230 1259 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Tgfbr3O88393 Gm29310-201ENSMUST00000185468 696 ntBASIC14.03□□□□□ -0.16
Tgfbr3O88393 Gm21825-201ENSMUST00000185728 696 ntBASIC14.03□□□□□ -0.16
Tgfbr3O88393 Gm29109-201ENSMUST00000185895 696 ntBASIC14.03□□□□□ -0.16
Tgfbr3O88393 Gm21896-201ENSMUST00000186520 696 ntBASIC14.03□□□□□ -0.16
Tgfbr3O88393 Gm21873-201ENSMUST00000186728 696 ntBASIC14.03□□□□□ -0.16
Tgfbr3O88393 Gm21794-201ENSMUST00000187056 696 ntBASIC14.03□□□□□ -0.16
Tgfbr3O88393 Gm21880-201ENSMUST00000187275 696 ntBASIC14.03□□□□□ -0.16
Tgfbr3O88393 Gm21826-201ENSMUST00000187451 696 ntBASIC14.03□□□□□ -0.16
Tgfbr3O88393 Gm21198-201ENSMUST00000188393 696 ntBASIC14.03□□□□□ -0.16
Tgfbr3O88393 Gm21749-201ENSMUST00000189343 696 ntBASIC14.03□□□□□ -0.16
Tgfbr3O88393 Gm21901-201ENSMUST00000189568 696 ntBASIC14.03□□□□□ -0.16
Tgfbr3O88393 Gm29424-201ENSMUST00000189716 696 ntBASIC14.03□□□□□ -0.16
Tgfbr3O88393 Gm28599-201ENSMUST00000189838 694 ntBASIC14.03□□□□□ -0.16
Tgfbr3O88393 Gm21867-201ENSMUST00000189917 696 ntBASIC14.03□□□□□ -0.16
Tgfbr3O88393 Gm29269-201ENSMUST00000190087 696 ntBASIC14.03□□□□□ -0.16
Tgfbr3O88393 Gm21722-201ENSMUST00000190153 696 ntBASIC14.03□□□□□ -0.16
Tgfbr3O88393 Gm28423-201ENSMUST00000190701 696 ntBASIC14.03□□□□□ -0.16
Tgfbr3O88393 Gm21899-201ENSMUST00000190745 696 ntBASIC14.03□□□□□ -0.16
Tgfbr3O88393 Gm21910-201ENSMUST00000191163 696 ntBASIC14.03□□□□□ -0.16
Tgfbr3O88393 Gm21849-201ENSMUST00000191571 696 ntBASIC14.03□□□□□ -0.16
Tgfbr3O88393 Gm28678-201ENSMUST00000191593 696 ntBASIC14.03□□□□□ -0.16
Tgfbr3O88393 Gm20910-201ENSMUST00000193268 696 ntBASIC14.03□□□□□ -0.16
Tgfbr3O88393 Gm21871-201ENSMUST00000194621 696 ntBASIC14.03□□□□□ -0.16
Tgfbr3O88393 Gm43703-201ENSMUST00000200523 763 ntBASIC14.03□□□□□ -0.16
Tgfbr3O88393 Gm45098-201ENSMUST00000207179 657 ntBASIC14.03□□□□□ -0.16
Tgfbr3O88393 Msgn1-201ENSMUST00000049877 613 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Tgfbr3O88393 Phgr1-201ENSMUST00000061360 538 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Tgfbr3O88393 Hfe-201ENSMUST00000006787 516 ntTSL 5 BASIC14.03□□□□□ -0.16
Tgfbr3O88393 Hfe-203ENSMUST00000091707 816 ntTSL 5 BASIC14.03□□□□□ -0.16
Tgfbr3O88393 Art3-205ENSMUST00000120193 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Tgfbr3O88393 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Tgfbr3O88393 Ccdc90b-201ENSMUST00000032842 1596 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Tgfbr3O88393 Psmc3-202ENSMUST00000067663 1636 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Tgfbr3O88393 Eif4g1-202ENSMUST00000073840 5394 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Tgfbr3O88393 Asic1-205ENSMUST00000228185 1818 ntBASIC14.03□□□□□ -0.16
Tgfbr3O88393 Myh14-204ENSMUST00000207775 6499 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Tgfbr3O88393 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Tgfbr3O88393 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Tgfbr3O88393 Elmo2-202ENSMUST00000074046 3502 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Tgfbr3O88393 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Tgfbr3O88393 Camsap3-201ENSMUST00000057028 4450 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Tgfbr3O88393 Ubn1-201ENSMUST00000052449 6455 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Tgfbr3O88393 Rps6kl1-201ENSMUST00000019379 2304 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Tgfbr3O88393 Phospho2-201ENSMUST00000028494 2260 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Tgfbr3O88393 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Tgfbr3O88393 Otol1-201ENSMUST00000053013 2161 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Tgfbr3O88393 Snx1-201ENSMUST00000034946 2073 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Tgfbr3O88393 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Tgfbr3O88393 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Tgfbr3O88393 Dmkn-204ENSMUST00000085691 2007 ntAPPRIS P4 TSL 1 (best) BASIC14.02□□□□□ -0.16
Tgfbr3O88393 A530083I20Rik-203ENSMUST00000214426 1855 ntTSL 5 BASIC14.02□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 24.4 ms