Protein–RNA interactions for Protein: O88351

Ikbkb, Inhibitor of nuclear factor kappa-B kinase subunit beta, mousemouse

Predictions only

Length 757 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IkbkbO88351 Slc7a10-203ENSMUST00000135452 629 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
IkbkbO88351 Oaz2-204ENSMUST00000136166 700 ntTSL 5 BASIC16.4■□□□□ 0.22
IkbkbO88351 Gm5177-201ENSMUST00000183092 997 ntBASIC16.4■□□□□ 0.22
IkbkbO88351 1700030N18Rik-201ENSMUST00000202497 966 ntBASIC16.4■□□□□ 0.22
IkbkbO88351 Usp30-201ENSMUST00000031588 4604 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
IkbkbO88351 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
IkbkbO88351 Carlr-201ENSMUST00000181515 2574 ntBASIC16.4■□□□□ 0.22
IkbkbO88351 Sorbs3-204ENSMUST00000227929 2460 ntBASIC16.4■□□□□ 0.22
IkbkbO88351 Slc18b1-206ENSMUST00000179321 2843 ntTSL 5 BASIC16.4■□□□□ 0.22
IkbkbO88351 Sirpa-202ENSMUST00000099113 3342 ntTSL 3 BASIC16.4■□□□□ 0.22
IkbkbO88351 Arap3-201ENSMUST00000042944 5224 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
IkbkbO88351 Tbc1d22b-201ENSMUST00000048677 3592 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
IkbkbO88351 Moxd1-201ENSMUST00000095784 3090 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
IkbkbO88351 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
IkbkbO88351 Ccdc181-201ENSMUST00000027867 1909 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
IkbkbO88351 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
IkbkbO88351 Galnt13-202ENSMUST00000112634 7639 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
IkbkbO88351 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
IkbkbO88351 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
IkbkbO88351 Dr1-201ENSMUST00000031190 3085 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
IkbkbO88351 Paqr9-201ENSMUST00000079597 8367 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
IkbkbO88351 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC16.39■□□□□ 0.21
IkbkbO88351 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
IkbkbO88351 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC16.39■□□□□ 0.21
IkbkbO88351 Rpl26-206ENSMUST00000167436 606 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
IkbkbO88351 Gm45747-201ENSMUST00000212203 999 ntBASIC16.39■□□□□ 0.21
IkbkbO88351 Tpd52l1-202ENSMUST00000213528 969 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
IkbkbO88351 Higd1a-206ENSMUST00000215300 605 ntAPPRIS P1 TSL 3 BASIC16.39■□□□□ 0.21
IkbkbO88351 Gm15500-202ENSMUST00000071641 1019 ntBASIC16.39■□□□□ 0.21
IkbkbO88351 Tmx4-201ENSMUST00000038228 5488 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
IkbkbO88351 Twsg1-201ENSMUST00000024906 4046 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
IkbkbO88351 Garem2-201ENSMUST00000058045 3865 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
IkbkbO88351 Lix1l-201ENSMUST00000062058 3312 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
IkbkbO88351 Flt1-202ENSMUST00000031653 6895 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
IkbkbO88351 Rnase10-202ENSMUST00000164632 1521 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
IkbkbO88351 Zbtb14-201ENSMUST00000062369 3625 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
IkbkbO88351 Mark2-209ENSMUST00000165965 2874 ntAPPRIS P4 TSL 1 (best) BASIC16.39■□□□□ 0.21
IkbkbO88351 Anxa3-201ENSMUST00000031447 1595 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
IkbkbO88351 Arl5c-201ENSMUST00000042971 1571 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
IkbkbO88351 Wwp2-205ENSMUST00000212543 1996 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
IkbkbO88351 Hip1r-201ENSMUST00000000939 6735 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
IkbkbO88351 Pard3-202ENSMUST00000079777 3394 ntTSL 5 BASIC16.38■□□□□ 0.21
IkbkbO88351 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
IkbkbO88351 Chtf18-201ENSMUST00000048054 3214 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
IkbkbO88351 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
IkbkbO88351 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
IkbkbO88351 Arid3c-201ENSMUST00000084698 1417 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
IkbkbO88351 Prrg4-201ENSMUST00000028593 2872 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
IkbkbO88351 Gspt2-201ENSMUST00000096368 2491 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
IkbkbO88351 Kif3a-201ENSMUST00000057330 2290 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
IkbkbO88351 Cacna1i-202ENSMUST00000160424 9781 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
IkbkbO88351 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC16.38■□□□□ 0.21
IkbkbO88351 Grip1os3-202ENSMUST00000146294 957 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
IkbkbO88351 Mzb1-201ENSMUST00000025211 905 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
IkbkbO88351 Ptprs-211ENSMUST00000223859 5588 ntBASIC16.38■□□□□ 0.21
IkbkbO88351 Tle3-205ENSMUST00000159630 4065 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
IkbkbO88351 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
IkbkbO88351 Pdzrn3-201ENSMUST00000075994 4104 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
IkbkbO88351 Vps53-201ENSMUST00000056601 2833 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
IkbkbO88351 Slc24a3-201ENSMUST00000081121 1788 ntAPPRIS P2 TSL 5 BASIC16.38■□□□□ 0.21
IkbkbO88351 Eif4g3-205ENSMUST00000105831 6235 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
IkbkbO88351 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
IkbkbO88351 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
IkbkbO88351 Tmem237-201ENSMUST00000087475 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
IkbkbO88351 Gm12689-201ENSMUST00000094955 1359 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
IkbkbO88351 Rdx-201ENSMUST00000000590 4380 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
IkbkbO88351 Gm8237-201ENSMUST00000164484 2051 ntAPPRIS P5 TSL 5 BASIC16.38■□□□□ 0.21
IkbkbO88351 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
IkbkbO88351 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
IkbkbO88351 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
IkbkbO88351 Coro6-201ENSMUST00000021190 1418 ntAPPRIS P5 TSL 1 (best) BASIC16.37■□□□□ 0.21
IkbkbO88351 Efcab14-202ENSMUST00000106522 2636 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
IkbkbO88351 Rgs6-216ENSMUST00000200911 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
IkbkbO88351 Ralgds-203ENSMUST00000113893 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
IkbkbO88351 Klf15-203ENSMUST00000203039 2482 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
IkbkbO88351 Nyap1-204ENSMUST00000212152 2499 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
IkbkbO88351 Pak2-201ENSMUST00000023467 5741 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
IkbkbO88351 Bag6-202ENSMUST00000166426 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
IkbkbO88351 Gm20708-201ENSMUST00000132298 1780 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
IkbkbO88351 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
IkbkbO88351 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC16.37■□□□□ 0.21
IkbkbO88351 Gm16151-201ENSMUST00000129696 639 ntTSL 3 BASIC16.37■□□□□ 0.21
IkbkbO88351 Fam71e1-204ENSMUST00000205422 366 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
IkbkbO88351 Msantd1-204ENSMUST00000212362 798 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
IkbkbO88351 Tspyl-ps-201ENSMUST00000220692 1117 ntBASIC16.37■□□□□ 0.21
IkbkbO88351 Msrb2-201ENSMUST00000023856 1196 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
IkbkbO88351 1110038F14Rik-201ENSMUST00000071792 1010 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
IkbkbO88351 Tbx15-201ENSMUST00000029462 3566 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
IkbkbO88351 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
IkbkbO88351 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
IkbkbO88351 Dlc1-203ENSMUST00000098826 6241 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
IkbkbO88351 Btbd3-202ENSMUST00000091556 4657 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
IkbkbO88351 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
IkbkbO88351 Ctdp1-201ENSMUST00000036229 3713 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
IkbkbO88351 Pola2-201ENSMUST00000025752 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
IkbkbO88351 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
IkbkbO88351 Cc2d1b-201ENSMUST00000030320 3303 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
IkbkbO88351 F2-201ENSMUST00000028681 1988 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
IkbkbO88351 Gm9856-201ENSMUST00000217077 2578 ntBASIC16.36■□□□□ 0.21
IkbkbO88351 Pxylp1-204ENSMUST00000120101 3189 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 34 ms