Protein–RNA interactions for Protein: O88207

Col5a1, Collagen alpha-1(V) chain, mousemouse

Predictions only

Length 1,838 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col5a1O88207 H2-Bl-210ENSMUST00000195833 829 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Col5a1O88207 Gm46209-201ENSMUST00000217912 553 ntBASIC13.2□□□□□ -0.3
Col5a1O88207 AC159474.1-201ENSMUST00000218454 374 ntTSL 3 BASIC13.2□□□□□ -0.3
Col5a1O88207 Eaf2-201ENSMUST00000023537 849 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Col5a1O88207 Cnpy2-201ENSMUST00000026446 763 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Col5a1O88207 Eapp-201ENSMUST00000067272 590 ntTSL 3 BASIC13.2□□□□□ -0.3
Col5a1O88207 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Col5a1O88207 Anapc2-201ENSMUST00000028341 3004 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Col5a1O88207 Arhgef1-201ENSMUST00000047873 3212 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Col5a1O88207 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Col5a1O88207 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Col5a1O88207 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC13.2□□□□□ -0.3
Col5a1O88207 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC13.2□□□□□ -0.3
Col5a1O88207 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Col5a1O88207 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Col5a1O88207 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Col5a1O88207 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Col5a1O88207 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC13.2□□□□□ -0.3
Col5a1O88207 Acp6-201ENSMUST00000090759 1754 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Col5a1O88207 Tmem204-201ENSMUST00000024984 1846 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Col5a1O88207 Chaf1b-202ENSMUST00000117099 1894 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Col5a1O88207 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC13.2□□□□□ -0.3
Col5a1O88207 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Col5a1O88207 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Col5a1O88207 Gm13496-201ENSMUST00000141133 1165 ntTSL 2 BASIC13.2□□□□□ -0.3
Col5a1O88207 Mir3102-201ENSMUST00000175555 104 ntBASIC13.2□□□□□ -0.3
Col5a1O88207 Spag7-201ENSMUST00000018431 1159 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Col5a1O88207 Agrp-202ENSMUST00000194091 734 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
Col5a1O88207 C030018K13Rik-202ENSMUST00000196829 712 ntTSL 3 BASIC13.2□□□□□ -0.3
Col5a1O88207 Zfp936-202ENSMUST00000200973 578 ntTSL 3 BASIC13.2□□□□□ -0.3
Col5a1O88207 Mobp-207ENSMUST00000215512 498 ntTSL 2 BASIC13.2□□□□□ -0.3
Col5a1O88207 H2bfm-201ENSMUST00000059808 1052 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
Col5a1O88207 Gm9867-201ENSMUST00000192212 2647 ntBASIC13.2□□□□□ -0.3
Col5a1O88207 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Col5a1O88207 Tppp3-203ENSMUST00000177126 1396 ntAPPRIS P1 TSL 3 BASIC13.2□□□□□ -0.3
Col5a1O88207 Phospho2-202ENSMUST00000112266 2194 ntAPPRIS P1 TSL 3 BASIC13.2□□□□□ -0.3
Col5a1O88207 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Col5a1O88207 BC001981-202ENSMUST00000191393 1545 ntBASIC13.19□□□□□ -0.3
Col5a1O88207 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC13.19□□□□□ -0.3
Col5a1O88207 Gatsl3-201ENSMUST00000020699 1574 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Col5a1O88207 Slc25a47-201ENSMUST00000057026 1580 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Col5a1O88207 Gtf2ird1-208ENSMUST00000167084 3283 ntTSL 5 BASIC13.19□□□□□ -0.3
Col5a1O88207 Zc3hc1-210ENSMUST00000152391 1673 ntTSL 5 BASIC13.19□□□□□ -0.3
Col5a1O88207 Mier2-201ENSMUST00000062855 2562 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Col5a1O88207 Fgfr1op2-203ENSMUST00000067404 2766 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Col5a1O88207 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Col5a1O88207 Gm39244-202ENSMUST00000210837 1857 ntTSL 5 BASIC13.19□□□□□ -0.3
Col5a1O88207 Fbxl8-201ENSMUST00000036221 1901 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Col5a1O88207 Sphk1-205ENSMUST00000106387 1957 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Col5a1O88207 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Col5a1O88207 Wee1-201ENSMUST00000033326 3419 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Col5a1O88207 Plod1-202ENSMUST00000105712 1059 ntTSL 2 BASIC13.19□□□□□ -0.3
Col5a1O88207 Gm13226-201ENSMUST00000117838 404 ntBASIC13.19□□□□□ -0.3
Col5a1O88207 Ube2j2-206ENSMUST00000118192 922 ntTSL 5 BASIC13.19□□□□□ -0.3
Col5a1O88207 4933427G23Rik-202ENSMUST00000126393 544 ntBASIC13.19□□□□□ -0.3
Col5a1O88207 Ly6g6e-204ENSMUST00000172959 501 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Col5a1O88207 Flg-208ENSMUST00000180308 1076 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Col5a1O88207 Gm42693-201ENSMUST00000196779 631 ntBASIC13.19□□□□□ -0.3
Col5a1O88207 4930500L23Rik-201ENSMUST00000198000 747 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Col5a1O88207 Mpv17-203ENSMUST00000200833 1171 ntTSL 5 BASIC13.19□□□□□ -0.3
Col5a1O88207 9430007M09Rik-201ENSMUST00000201947 804 ntBASIC13.19□□□□□ -0.3
Col5a1O88207 Gm40193-201ENSMUST00000209971 237 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Col5a1O88207 Gm7619-201ENSMUST00000210649 1282 ntBASIC13.19□□□□□ -0.3
Col5a1O88207 Gm7390-201ENSMUST00000212452 1216 ntBASIC13.19□□□□□ -0.3
Col5a1O88207 AC155286.1-201ENSMUST00000218632 448 ntBASIC13.19□□□□□ -0.3
Col5a1O88207 Rps21-201ENSMUST00000059080 394 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Col5a1O88207 Gm10478-201ENSMUST00000084451 396 ntBASIC13.19□□□□□ -0.3
Col5a1O88207 Kcnip2-203ENSMUST00000086993 1005 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Col5a1O88207 Ccdc33-202ENSMUST00000098681 1093 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Col5a1O88207 Gm10584-201ENSMUST00000207036 2628 ntBASIC13.19□□□□□ -0.3
Col5a1O88207 4930423C22Rik-201ENSMUST00000193863 1311 ntBASIC13.19□□□□□ -0.3
Col5a1O88207 Pdss2-202ENSMUST00000159139 1467 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Col5a1O88207 Prrxl1-203ENSMUST00000187377 1629 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Col5a1O88207 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Col5a1O88207 Elovl1-201ENSMUST00000006557 1811 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Col5a1O88207 Orai3-203ENSMUST00000121504 2141 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Col5a1O88207 Tmem241-202ENSMUST00000055447 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Col5a1O88207 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Col5a1O88207 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Col5a1O88207 Rps3-202ENSMUST00000107096 952 ntTSL 3 BASIC13.18□□□□□ -0.3
Col5a1O88207 Rnaseh2a-206ENSMUST00000128972 1141 ntTSL 2 BASIC13.18□□□□□ -0.3
Col5a1O88207 Gm13185-201ENSMUST00000131044 944 ntTSL 3 BASIC13.18□□□□□ -0.3
Col5a1O88207 Ube2i-211ENSMUST00000173713 890 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Col5a1O88207 AI606473-201ENSMUST00000177201 1731 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Col5a1O88207 CN725425-202ENSMUST00000190436 2041 ntAPPRIS P5 TSL 5 BASIC13.18□□□□□ -0.3
Col5a1O88207 Klhl26-204ENSMUST00000209567 2615 ntTSL 3 BASIC13.18□□□□□ -0.3
Col5a1O88207 Gp9-201ENSMUST00000032133 881 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Col5a1O88207 Ndufa4l2-201ENSMUST00000035735 934 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Col5a1O88207 Gm9797-201ENSMUST00000052902 613 ntBASIC13.18□□□□□ -0.3
Col5a1O88207 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Col5a1O88207 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Col5a1O88207 Ttll5-204ENSMUST00000110220 2655 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Col5a1O88207 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC13.18□□□□□ -0.3
Col5a1O88207 Snx8-205ENSMUST00000196566 1914 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Col5a1O88207 AI467606-201ENSMUST00000056288 1932 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Col5a1O88207 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Col5a1O88207 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Col5a1O88207 Hsd3b3-201ENSMUST00000090743 1492 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Col5a1O88207 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Col5a1O88207 9430015G10Rik-208ENSMUST00000169550 2660 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 31.9 ms