Protein–RNA interactions for Protein: O70591

Pfdn2, Prefoldin subunit 2, mousemouse

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pfdn2O70591 Ccnt2-202ENSMUST00000112570 4511 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Pfdn2O70591 B3gnt7-201ENSMUST00000113306 2582 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Pfdn2O70591 Rad18-201ENSMUST00000068487 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Pfdn2O70591 Aldh3b1-201ENSMUST00000051803 1875 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Pfdn2O70591 Sde2-201ENSMUST00000038091 3213 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Pfdn2O70591 Gm26850-201ENSMUST00000181653 2669 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Pfdn2O70591 Nup160-201ENSMUST00000057481 5684 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Pfdn2O70591 Gm29724-201ENSMUST00000214688 3062 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Pfdn2O70591 Gm9947-201ENSMUST00000067599 2920 ntBASIC12.4□□□□□ -0.42
Pfdn2O70591 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Pfdn2O70591 Srr-204ENSMUST00000121738 3183 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Pfdn2O70591 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Pfdn2O70591 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Pfdn2O70591 Gm6257-201ENSMUST00000163864 910 ntBASIC12.4□□□□□ -0.42
Pfdn2O70591 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC12.4□□□□□ -0.42
Pfdn2O70591 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC12.4□□□□□ -0.42
Pfdn2O70591 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Pfdn2O70591 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Pfdn2O70591 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Pfdn2O70591 Rab11fip2-201ENSMUST00000051996 4482 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Pfdn2O70591 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC12.4□□□□□ -0.42
Pfdn2O70591 Rbbp8nl-201ENSMUST00000038529 2319 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Pfdn2O70591 Phf24-201ENSMUST00000069184 6392 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Pfdn2O70591 Kif1c-202ENSMUST00000094499 5168 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Pfdn2O70591 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Pfdn2O70591 Tacc3-201ENSMUST00000074849 2669 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Pfdn2O70591 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Pfdn2O70591 Utp23-203ENSMUST00000137116 2921 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Pfdn2O70591 Tln1-201ENSMUST00000030187 8393 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Pfdn2O70591 Plcb2-202ENSMUST00000102524 5145 ntAPPRIS P3 TSL 2 BASIC12.4□□□□□ -0.42
Pfdn2O70591 Ptdss1-201ENSMUST00000021990 3424 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Pfdn2O70591 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.43
Pfdn2O70591 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Pfdn2O70591 Olfml2a-201ENSMUST00000057279 5579 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Pfdn2O70591 Fnbp1-209ENSMUST00000113562 4515 ntTSL 1 (best) BASIC12.4□□□□□ -0.43
Pfdn2O70591 Rims1-205ENSMUST00000097811 6446 ntAPPRIS P5 TSL 5 BASIC12.39□□□□□ -0.43
Pfdn2O70591 Gnpat-201ENSMUST00000034466 2984 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Pfdn2O70591 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Pfdn2O70591 Fbxl12-205ENSMUST00000140702 1555 ntBASIC12.39□□□□□ -0.43
Pfdn2O70591 E430024P14Rik-202ENSMUST00000160177 2050 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Pfdn2O70591 Sept12-201ENSMUST00000170323 2576 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Pfdn2O70591 G2e3-201ENSMUST00000054308 6803 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Pfdn2O70591 Drd5-201ENSMUST00000041646 3152 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
Pfdn2O70591 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Pfdn2O70591 Gm4755-201ENSMUST00000181803 2647 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Pfdn2O70591 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC12.39□□□□□ -0.43
Pfdn2O70591 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC12.39□□□□□ -0.43
Pfdn2O70591 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC12.39□□□□□ -0.43
Pfdn2O70591 5033426O07Rik-202ENSMUST00000212635 2110 ntTSL 5 BASIC12.39□□□□□ -0.43
Pfdn2O70591 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Pfdn2O70591 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Pfdn2O70591 Gpr146-202ENSMUST00000053120 1040 ntBASIC12.39□□□□□ -0.43
Pfdn2O70591 Catip-201ENSMUST00000097697 2101 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Pfdn2O70591 Vps26b-201ENSMUST00000034470 3575 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Pfdn2O70591 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Pfdn2O70591 Ablim2-202ENSMUST00000101280 3042 ntTSL 5 BASIC12.39□□□□□ -0.43
Pfdn2O70591 Gpsm1-203ENSMUST00000078616 3127 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Pfdn2O70591 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Pfdn2O70591 Peli3-202ENSMUST00000120475 2988 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Pfdn2O70591 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Pfdn2O70591 March8-213ENSMUST00000203193 4245 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Pfdn2O70591 Gckr-201ENSMUST00000072228 2014 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Pfdn2O70591 Rfc2-201ENSMUST00000023867 4995 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Pfdn2O70591 Klhl32-204ENSMUST00000108218 7143 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Pfdn2O70591 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Pfdn2O70591 Fam192a-201ENSMUST00000034226 2873 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Pfdn2O70591 Trio-201ENSMUST00000090247 11495 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Pfdn2O70591 Prkcz-201ENSMUST00000030922 2641 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Pfdn2O70591 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Pfdn2O70591 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC12.38□□□□□ -0.43
Pfdn2O70591 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Pfdn2O70591 Efs-201ENSMUST00000022813 2705 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Pfdn2O70591 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Pfdn2O70591 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Pfdn2O70591 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Pfdn2O70591 Gm15565-201ENSMUST00000118890 427 ntBASIC12.38□□□□□ -0.43
Pfdn2O70591 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC12.38□□□□□ -0.43
Pfdn2O70591 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Pfdn2O70591 Gm6623-201ENSMUST00000173570 544 ntBASIC12.38□□□□□ -0.43
Pfdn2O70591 Mir6404-201ENSMUST00000183699 94 ntBASIC12.38□□□□□ -0.43
Pfdn2O70591 Mir6982-201ENSMUST00000184354 68 ntBASIC12.38□□□□□ -0.43
Pfdn2O70591 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC12.38□□□□□ -0.43
Pfdn2O70591 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC12.38□□□□□ -0.43
Pfdn2O70591 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Pfdn2O70591 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
Pfdn2O70591 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Pfdn2O70591 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC12.38□□□□□ -0.43
Pfdn2O70591 B4galt2-203ENSMUST00000106421 1801 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Pfdn2O70591 Nap1l5-201ENSMUST00000059539 1844 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
Pfdn2O70591 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Pfdn2O70591 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Pfdn2O70591 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Pfdn2O70591 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Pfdn2O70591 Sh3bp5-201ENSMUST00000091903 2684 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Pfdn2O70591 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Pfdn2O70591 Gm9889-202ENSMUST00000206983 1577 ntBASIC12.38□□□□□ -0.43
Pfdn2O70591 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Pfdn2O70591 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Pfdn2O70591 Adamts20-204ENSMUST00000155907 6886 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Pfdn2O70591 Ntn4-201ENSMUST00000020204 3646 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 68 ms