Protein–RNA interactions for Protein: O70480

Vamp4, Vesicle-associated membrane protein 4, mousemouse

Predictions only

Length 141 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vamp4O70480 Slc35c2-201ENSMUST00000017808 1843 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Vamp4O70480 Zfp688-201ENSMUST00000106300 1015 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
Vamp4O70480 Romo1-203ENSMUST00000109598 362 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
Vamp4O70480 AC155937.1-202ENSMUST00000156229 621 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
Vamp4O70480 Repin1-207ENSMUST00000163452 2959 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
Vamp4O70480 Cd3g-201ENSMUST00000002101 1023 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Vamp4O70480 1700128F08Rik-202ENSMUST00000213708 717 ntBASIC18.66■□□□□ 0.58
Vamp4O70480 Il31-201ENSMUST00000031389 806 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Vamp4O70480 Sybu-209ENSMUST00000228639 4113 ntBASIC18.66■□□□□ 0.58
Vamp4O70480 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Vamp4O70480 Derl1-201ENSMUST00000022993 3175 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Vamp4O70480 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Vamp4O70480 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Vamp4O70480 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Vamp4O70480 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Vamp4O70480 Myog-201ENSMUST00000027730 1495 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Vamp4O70480 Poli-201ENSMUST00000043286 2591 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Vamp4O70480 Washc1-201ENSMUST00000072383 2904 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Vamp4O70480 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Vamp4O70480 Fam3a-205ENSMUST00000114142 1586 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
Vamp4O70480 Hist1h3e-201ENSMUST00000105107 836 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
Vamp4O70480 Mettl23-201ENSMUST00000106370 1276 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Vamp4O70480 Cmc2-202ENSMUST00000128304 394 ntTSL 5 BASIC18.65■□□□□ 0.58
Vamp4O70480 Hpca-207ENSMUST00000139450 812 ntAPPRIS P1 TSL 3 BASIC18.65■□□□□ 0.58
Vamp4O70480 Runx2os2-201ENSMUST00000161664 818 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Vamp4O70480 Gm17455-201ENSMUST00000164428 855 ntAPPRIS P1 TSL 3 BASIC18.65■□□□□ 0.58
Vamp4O70480 AC158529.1-201ENSMUST00000223618 239 ntBASIC18.65■□□□□ 0.58
Vamp4O70480 AC140397.2-201ENSMUST00000224213 834 ntBASIC18.65■□□□□ 0.58
Vamp4O70480 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Vamp4O70480 4933434E20Rik-204ENSMUST00000159064 1344 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Vamp4O70480 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Vamp4O70480 Cdhr5-201ENSMUST00000080654 2133 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
Vamp4O70480 Pld5-202ENSMUST00000111166 1370 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Vamp4O70480 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Vamp4O70480 Usp51-201ENSMUST00000095755 2204 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Vamp4O70480 Rapgef6-205ENSMUST00000108895 1829 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Vamp4O70480 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Vamp4O70480 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC18.64■□□□□ 0.58
Vamp4O70480 Slc8b1-201ENSMUST00000068326 2898 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.58
Vamp4O70480 3110082I17Rik-204ENSMUST00000198474 2030 ntTSL 2 BASIC18.64■□□□□ 0.58
Vamp4O70480 Prkg1-206ENSMUST00000182685 1628 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Vamp4O70480 Dpp7-201ENSMUST00000028332 1682 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Vamp4O70480 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
Vamp4O70480 Tex44-201ENSMUST00000046004 1724 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
Vamp4O70480 Arpin-201ENSMUST00000048731 2277 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Vamp4O70480 Gm14701-201ENSMUST00000117156 348 ntBASIC18.64■□□□□ 0.57
Vamp4O70480 Mvk-206ENSMUST00000137167 1049 ntTSL 2 BASIC18.64■□□□□ 0.57
Vamp4O70480 Gm27164-201ENSMUST00000184359 723 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Vamp4O70480 Gm29541-201ENSMUST00000191351 678 ntBASIC18.64■□□□□ 0.57
Vamp4O70480 9230114J08Rik-201ENSMUST00000200375 350 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Vamp4O70480 Gm34964-201ENSMUST00000207398 417 ntTSL 5 BASIC18.64■□□□□ 0.57
Vamp4O70480 Prg3-201ENSMUST00000028466 949 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Vamp4O70480 Orc6-201ENSMUST00000034132 1287 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Vamp4O70480 Taf6-201ENSMUST00000048698 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Vamp4O70480 Gm42466-201ENSMUST00000202099 1301 ntBASIC18.64■□□□□ 0.57
Vamp4O70480 Zmym3-208ENSMUST00000121429 1890 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Vamp4O70480 Hspa1a-201ENSMUST00000087328 2967 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
Vamp4O70480 Aanat-205ENSMUST00000153476 1353 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Vamp4O70480 Gm17315-201ENSMUST00000181408 2504 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Vamp4O70480 Slc30a5-201ENSMUST00000067246 3179 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Vamp4O70480 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Vamp4O70480 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Vamp4O70480 Prdm4-201ENSMUST00000037646 3877 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Vamp4O70480 B3gnt7-201ENSMUST00000113306 2582 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Vamp4O70480 Unc93b1-204ENSMUST00000165711 1991 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
Vamp4O70480 Mfsd6l-201ENSMUST00000053211 2060 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
Vamp4O70480 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Vamp4O70480 Tmsb10-203ENSMUST00000114050 570 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Vamp4O70480 Hoga1-204ENSMUST00000172244 631 ntTSL 5 BASIC18.63■□□□□ 0.57
Vamp4O70480 4933437G19Rik-201ENSMUST00000197910 1178 ntBASIC18.63■□□□□ 0.57
Vamp4O70480 Gm42560-201ENSMUST00000201216 1023 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Vamp4O70480 Commd9-201ENSMUST00000028584 1191 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Vamp4O70480 Krtap9-3-201ENSMUST00000062683 759 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
Vamp4O70480 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Vamp4O70480 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
Vamp4O70480 Pcp2-202ENSMUST00000128566 1447 ntAPPRIS ALT2 TSL 2 BASIC18.63■□□□□ 0.57
Vamp4O70480 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
Vamp4O70480 Vwa5b2-203ENSMUST00000100074 2512 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
Vamp4O70480 Gpank1-202ENSMUST00000165306 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Vamp4O70480 Cyp2t4-201ENSMUST00000108385 1599 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
Vamp4O70480 Gm37305-201ENSMUST00000195714 4279 ntBASIC18.63■□□□□ 0.57
Vamp4O70480 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Vamp4O70480 Cct6b-202ENSMUST00000100722 1871 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Vamp4O70480 Rnf138-201ENSMUST00000052396 3110 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
Vamp4O70480 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Vamp4O70480 Chuk-201ENSMUST00000026217 3502 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Vamp4O70480 Pcsk4-201ENSMUST00000020340 2539 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Vamp4O70480 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC18.62■□□□□ 0.57
Vamp4O70480 Gm9913-201ENSMUST00000066157 2793 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
Vamp4O70480 Zfp184-202ENSMUST00000102978 3198 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
Vamp4O70480 Tnfrsf13b-202ENSMUST00000101103 750 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Vamp4O70480 Taf3-202ENSMUST00000114906 583 ntTSL 2 BASIC18.62■□□□□ 0.57
Vamp4O70480 Cdk2ap2-204ENSMUST00000174514 669 ntTSL 2 BASIC18.62■□□□□ 0.57
Vamp4O70480 Gm8116-201ENSMUST00000182917 1201 ntBASIC18.62■□□□□ 0.57
Vamp4O70480 Elof1-203ENSMUST00000213233 810 ntAPPRIS P1 TSL 3 BASIC18.62■□□□□ 0.57
Vamp4O70480 Gzma-201ENSMUST00000023897 878 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Vamp4O70480 Rhbdl1-202ENSMUST00000183929 1349 ntTSL 5 BASIC18.62■□□□□ 0.57
Vamp4O70480 Capg-203ENSMUST00000114072 1388 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Vamp4O70480 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Vamp4O70480 Gm6756-201ENSMUST00000180647 1620 ntBASIC18.62■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 65.8 ms