Protein–RNA interactions for Protein: O55176

Pja1, E3 ubiquitin-protein ligase Praja-1, mousemouse

Predictions only

Length 578 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pja1O55176 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Pja1O55176 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC15.66■□□□□ 0.1
Pja1O55176 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC15.66■□□□□ 0.1
Pja1O55176 Gnptg-201ENSMUST00000038973 1234 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Pja1O55176 Tmem30b-201ENSMUST00000042975 2991 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
Pja1O55176 Efcab14-202ENSMUST00000106522 2636 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Pja1O55176 Syne3-201ENSMUST00000067005 5097 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Pja1O55176 Adgrb2-201ENSMUST00000030571 4734 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
Pja1O55176 Tbrg4-201ENSMUST00000000394 2290 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Pja1O55176 Slc39a3-202ENSMUST00000117276 3796 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Pja1O55176 Slc16a9-201ENSMUST00000046807 3756 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Pja1O55176 Pdia2-202ENSMUST00000120333 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Pja1O55176 Krt14-201ENSMUST00000007272 1698 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Pja1O55176 Bbs7-203ENSMUST00000108156 2687 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Pja1O55176 Emp2-201ENSMUST00000078357 3440 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Pja1O55176 Rspry1-207ENSMUST00000212729 2800 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Pja1O55176 Tle3-210ENSMUST00000161207 2592 ntTSL 5 BASIC15.66■□□□□ 0.1
Pja1O55176 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Pja1O55176 Cgn-202ENSMUST00000107273 5016 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
Pja1O55176 Bcan-201ENSMUST00000090971 3141 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Pja1O55176 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
Pja1O55176 Tex13b-201ENSMUST00000044179 2116 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Pja1O55176 Arhgap44-201ENSMUST00000047463 4074 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Pja1O55176 Plekha1-201ENSMUST00000048180 3321 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Pja1O55176 Fam76b-201ENSMUST00000059579 3702 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Pja1O55176 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Pja1O55176 Ftcd-201ENSMUST00000001183 1933 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Pja1O55176 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC15.65■□□□□ 0.1
Pja1O55176 Mdk-204ENSMUST00000111309 771 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
Pja1O55176 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Pja1O55176 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC15.65■□□□□ 0.1
Pja1O55176 Kcnk16-201ENSMUST00000024155 916 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
Pja1O55176 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Pja1O55176 Trmt10c-201ENSMUST00000059052 3002 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Pja1O55176 Gm4081-201ENSMUST00000195287 1838 ntBASIC15.65■□□□□ 0.1
Pja1O55176 Opn5-201ENSMUST00000068355 1824 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Pja1O55176 Itpk1-201ENSMUST00000046518 2918 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Pja1O55176 Trmt1-205ENSMUST00000125370 2114 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
Pja1O55176 Psma3-202ENSMUST00000160027 2846 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Pja1O55176 Kdm4b-202ENSMUST00000086835 4360 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
Pja1O55176 Lrch4-202ENSMUST00000175968 2036 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
Pja1O55176 Cyb561a3-201ENSMUST00000168445 1474 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
Pja1O55176 Dnase1l2-202ENSMUST00000119932 1629 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Pja1O55176 2310011J03Rik-201ENSMUST00000020341 1649 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Pja1O55176 Npnt-204ENSMUST00000117164 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.1
Pja1O55176 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Pja1O55176 Ints14-201ENSMUST00000037504 2837 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Pja1O55176 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
Pja1O55176 4921513I03Rik-201ENSMUST00000056994 1534 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Pja1O55176 Gm32591-204ENSMUST00000208679 1806 ntTSL 5 BASIC15.64■□□□□ 0.09
Pja1O55176 Eif2a-201ENSMUST00000029387 2299 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Pja1O55176 Psmd5-201ENSMUST00000028225 4397 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Pja1O55176 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Pja1O55176 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC15.64■□□□□ 0.09
Pja1O55176 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
Pja1O55176 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
Pja1O55176 Gm37500-201ENSMUST00000192059 1443 ntBASIC15.64■□□□□ 0.09
Pja1O55176 A530083I20Rik-203ENSMUST00000214426 1855 ntTSL 5 BASIC15.64■□□□□ 0.09
Pja1O55176 Lancl3-201ENSMUST00000069763 3991 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Pja1O55176 H13-202ENSMUST00000089059 1743 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Pja1O55176 Kcnq2-217ENSMUST00000149964 8209 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Pja1O55176 Sh2b1-205ENSMUST00000205733 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Pja1O55176 Rlf-201ENSMUST00000056635 6242 ntAPPRIS P2 TSL 5 BASIC15.64■□□□□ 0.09
Pja1O55176 Rcn3-201ENSMUST00000019683 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Pja1O55176 Rcn3-208ENSMUST00000211352 1453 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Pja1O55176 Gm43951-201ENSMUST00000204457 2889 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
Pja1O55176 Gtf2h1-201ENSMUST00000006774 2736 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Pja1O55176 Btbd10-201ENSMUST00000047091 2581 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Pja1O55176 Bet1l-201ENSMUST00000026557 2268 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Pja1O55176 Dnm1l-201ENSMUST00000023477 4017 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Pja1O55176 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Pja1O55176 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Pja1O55176 Selenon-201ENSMUST00000060435 3445 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
Pja1O55176 Vsig10-202ENSMUST00000111967 4236 ntAPPRIS P2 TSL 5 BASIC15.64■□□□□ 0.09
Pja1O55176 Itga8-201ENSMUST00000028106 5812 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Pja1O55176 Cdk8-205ENSMUST00000161181 2467 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Pja1O55176 Fam163b-201ENSMUST00000151224 2959 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Pja1O55176 Eef2kmt-201ENSMUST00000064635 2170 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Pja1O55176 Cpne1-203ENSMUST00000109608 3492 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Pja1O55176 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Pja1O55176 Pja1-205ENSMUST00000167246 2666 ntAPPRIS P4 TSL 1 (best) BASIC15.63■□□□□ 0.09
Pja1O55176 Limk1-201ENSMUST00000015137 3331 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Pja1O55176 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Pja1O55176 Skap1-205ENSMUST00000107662 1861 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Pja1O55176 Rabggta-202ENSMUST00000163889 1886 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Pja1O55176 Rfx5-207ENSMUST00000137088 4333 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
Pja1O55176 Wdr90-201ENSMUST00000079461 5991 ntAPPRIS P2 TSL 5 BASIC15.63■□□□□ 0.09
Pja1O55176 Dlat-201ENSMUST00000034567 4035 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Pja1O55176 Dimt1-201ENSMUST00000022203 2051 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Pja1O55176 Sept8-202ENSMUST00000117061 4563 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
Pja1O55176 Psmc4-201ENSMUST00000032824 1440 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Pja1O55176 Zfp668-204ENSMUST00000106263 3132 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Pja1O55176 Hoxb8-201ENSMUST00000052650 2635 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Pja1O55176 Trav13-3-201ENSMUST00000117226 336 ntBASIC15.63■□□□□ 0.09
Pja1O55176 Gm11764-201ENSMUST00000120221 623 ntBASIC15.63■□□□□ 0.09
Pja1O55176 4930481B07Rik-201ENSMUST00000128160 1089 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Pja1O55176 Tmem9-205ENSMUST00000165125 901 ntAPPRIS P1 TSL 3 BASIC15.63■□□□□ 0.09
Pja1O55176 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
Pja1O55176 Ank2-226ENSMUST00000189368 339 ntBASIC15.63■□□□□ 0.09
Pja1O55176 Hnrnpr-204ENSMUST00000131671 2543 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 27.9 ms