Protein–RNA interactions for Protein: O54943

Per2, Period circadian protein homolog 2, mousemouse

Predictions only

Length 1,257 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Per2O54943 Rogdi-202ENSMUST00000090453 652 ntTSL 5 BASIC15.45■□□□□ 0.06
Per2O54943 Fam149b-211ENSMUST00000224930 2716 ntAPPRIS ALT2 BASIC15.45■□□□□ 0.06
Per2O54943 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC15.45■□□□□ 0.06
Per2O54943 Phldb1-201ENSMUST00000034611 5461 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Per2O54943 Gm3373-202ENSMUST00000177556 1955 ntAPPRIS P5 TSL 5 BASIC15.45■□□□□ 0.06
Per2O54943 Gm3500-201ENSMUST00000177986 1955 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
Per2O54943 Rcn3-201ENSMUST00000019683 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Per2O54943 Rcn3-208ENSMUST00000211352 1453 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Per2O54943 Klhl9-201ENSMUST00000094993 4174 ntAPPRIS P1 BASIC15.45■□□□□ 0.06
Per2O54943 Myrf-201ENSMUST00000088013 5674 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
Per2O54943 Fbxl12-205ENSMUST00000140702 1555 ntBASIC15.45■□□□□ 0.06
Per2O54943 Piezo1-209ENSMUST00000156333 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Per2O54943 Cacna2d3-201ENSMUST00000022567 3695 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Per2O54943 Piezo1-201ENSMUST00000067252 8216 ntAPPRIS P2 TSL 5 BASIC15.45■□□□□ 0.06
Per2O54943 Col4a1-201ENSMUST00000033898 6615 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Per2O54943 Gm17108-201ENSMUST00000168625 2877 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Per2O54943 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Per2O54943 Ss18l1-201ENSMUST00000041126 4343 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Per2O54943 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC15.44■□□□□ 0.06
Per2O54943 2310011J03Rik-201ENSMUST00000020341 1649 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Per2O54943 Idh3b-201ENSMUST00000028892 1616 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Per2O54943 Pax7-201ENSMUST00000030508 5854 ntAPPRIS P2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Per2O54943 Pwwp2a-201ENSMUST00000061070 3277 ntAPPRIS P2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Per2O54943 Rab10os-206ENSMUST00000179908 746 ntTSL 5 BASIC15.44■□□□□ 0.06
Per2O54943 2010010A06Rik-203ENSMUST00000190465 650 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Per2O54943 Timm9-205ENSMUST00000221178 529 ntTSL 3 BASIC15.44■□□□□ 0.06
Per2O54943 1700080E11Rik-201ENSMUST00000035180 883 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Per2O54943 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Per2O54943 Lce3c-201ENSMUST00000055375 567 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Per2O54943 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Per2O54943 Kif17-201ENSMUST00000030539 3453 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
Per2O54943 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
Per2O54943 Sorbs1-208ENSMUST00000224247 2688 ntAPPRIS ALT2 BASIC15.44■□□□□ 0.06
Per2O54943 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Per2O54943 Slc4a2-201ENSMUST00000080067 4179 ntAPPRIS P2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Per2O54943 Dnmt3b-202ENSMUST00000072997 4208 ntAPPRIS P4 TSL 1 (best) BASIC15.44■□□□□ 0.06
Per2O54943 Wnt11-201ENSMUST00000067495 3451 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
Per2O54943 Psmb10-201ENSMUST00000034369 1311 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Per2O54943 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC15.43■□□□□ 0.06
Per2O54943 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC15.43■□□□□ 0.06
Per2O54943 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Per2O54943 Wdr31-203ENSMUST00000120095 2549 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
Per2O54943 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
Per2O54943 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Per2O54943 Robo4-205ENSMUST00000214185 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Per2O54943 Tbk1-201ENSMUST00000020316 3024 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Per2O54943 Enkd1-201ENSMUST00000013299 1275 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Per2O54943 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Per2O54943 Ccer2-201ENSMUST00000178767 1054 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
Per2O54943 Gm26695-201ENSMUST00000180920 1251 ntTSL 5 BASIC15.43■□□□□ 0.06
Per2O54943 Mzt1-203ENSMUST00000227948 952 ntBASIC15.43■□□□□ 0.06
Per2O54943 Fancm-201ENSMUST00000058889 7775 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Per2O54943 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Per2O54943 Gm13344-201ENSMUST00000137714 1557 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Per2O54943 Cct6b-202ENSMUST00000100722 1871 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Per2O54943 Lap3-201ENSMUST00000046122 2267 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Per2O54943 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Per2O54943 Ralgds-201ENSMUST00000028170 3590 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
Per2O54943 Ankrd13b-202ENSMUST00000092892 3336 ntAPPRIS P2 TSL 5 BASIC15.43■□□□□ 0.06
Per2O54943 Lpcat2-201ENSMUST00000046290 2811 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Per2O54943 Glis1-202ENSMUST00000106738 2744 ntAPPRIS ALT2 TSL 5 BASIC15.43■□□□□ 0.06
Per2O54943 Klhl26-202ENSMUST00000166976 2734 ntTSL 2 BASIC15.43■□□□□ 0.06
Per2O54943 Rsbn1l-201ENSMUST00000036489 5550 ntAPPRIS P2 TSL 5 BASIC15.43■□□□□ 0.06
Per2O54943 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Per2O54943 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Per2O54943 Nfya-206ENSMUST00000160319 1407 ntTSL 5 BASIC15.43■□□□□ 0.06
Per2O54943 Ptk7-201ENSMUST00000044442 4255 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Per2O54943 Pigv-201ENSMUST00000062118 3979 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Per2O54943 Syvn1-203ENSMUST00000134667 3159 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Per2O54943 Trib1-201ENSMUST00000067543 4330 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Per2O54943 Lrriq4-202ENSMUST00000108267 2387 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
Per2O54943 Pde4dip-202ENSMUST00000090750 8376 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Per2O54943 Cobll1-201ENSMUST00000090896 4867 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Per2O54943 Psmd13-201ENSMUST00000026560 1989 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Per2O54943 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Per2O54943 Dnajc28-201ENSMUST00000049244 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Per2O54943 Tomm70a-201ENSMUST00000166897 3778 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Per2O54943 Kat8-201ENSMUST00000033070 1579 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Per2O54943 Kirrel-202ENSMUST00000107618 7278 ntAPPRIS P2 TSL 5 BASIC15.42■□□□□ 0.06
Per2O54943 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Per2O54943 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC15.42■□□□□ 0.06
Per2O54943 Gm45799-202ENSMUST00000106786 409 ntAPPRIS ALT2 TSL 3 BASIC15.42■□□□□ 0.06
Per2O54943 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC15.42■□□□□ 0.06
Per2O54943 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Per2O54943 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Per2O54943 Tma7-203ENSMUST00000192801 386 ntTSL 3 BASIC15.42■□□□□ 0.06
Per2O54943 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Per2O54943 Gm44107-201ENSMUST00000203242 573 ntTSL 2 BASIC15.42■□□□□ 0.06
Per2O54943 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC15.42■□□□□ 0.06
Per2O54943 Gm16845-202ENSMUST00000216270 567 ntTSL 2 BASIC15.42■□□□□ 0.06
Per2O54943 Vkorc1-201ENSMUST00000033074 748 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Per2O54943 Bsx-201ENSMUST00000067375 2960 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Per2O54943 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Per2O54943 Spns1-202ENSMUST00000119754 2001 ntTSL 5 BASIC15.42■□□□□ 0.06
Per2O54943 Tinf2-205ENSMUST00000227842 2001 ntAPPRIS ALT2 BASIC15.42■□□□□ 0.06
Per2O54943 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Per2O54943 Fen1-204ENSMUST00000156291 2373 ntAPPRIS P1 TSL 2 BASIC15.42■□□□□ 0.06
Per2O54943 Spcs2-210ENSMUST00000209032 1610 ntTSL 5 BASIC15.42■□□□□ 0.06
Per2O54943 Aph1a-202ENSMUST00000056710 1601 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Per2O54943 Slc33a1-202ENSMUST00000160883 1978 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
Retrieved 100 of 76,532 protein–RNA pairs in 47.8 ms