Protein–RNA interactions for Protein: O54785

Limk2, LIM domain kinase 2, mousemouse

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Limk2O54785 Kif26a-201ENSMUST00000128402 6918 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Limk2O54785 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC15.03■□□□□ -0
Limk2O54785 Tfeb-201ENSMUST00000024786 2296 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
Limk2O54785 Ctnna2-204ENSMUST00000160894 4162 ntTSL 1 (best) BASIC15.03■□□□□ -0
Limk2O54785 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Limk2O54785 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
Limk2O54785 Gm16425-201ENSMUST00000118143 3130 ntBASIC15.02■□□□□ -0
Limk2O54785 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC15.02■□□□□ -0
Limk2O54785 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC15.02■□□□□ -0
Limk2O54785 Pou2f3-202ENSMUST00000176636 2522 ntAPPRIS P2 TSL 1 (best) BASIC15.02■□□□□ -0
Limk2O54785 Evpl-201ENSMUST00000037007 6384 ntAPPRIS P1 TSL 2 BASIC15.02■□□□□ -0
Limk2O54785 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC15.02■□□□□ -0
Limk2O54785 Klk10-201ENSMUST00000014058 1373 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Limk2O54785 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC15.02■□□□□ -0
Limk2O54785 Sik1-201ENSMUST00000024839 4511 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Limk2O54785 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC15.02■□□□□ -0
Limk2O54785 Rdx-201ENSMUST00000000590 4380 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Limk2O54785 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC15.02■□□□□ -0
Limk2O54785 Gm6226-201ENSMUST00000117765 1146 ntBASIC15.02■□□□□ -0
Limk2O54785 1810032O08Rik-206ENSMUST00000144049 966 ntAPPRIS P5 TSL 2 BASIC15.02■□□□□ -0
Limk2O54785 Nespas-202ENSMUST00000150276 1262 ntTSL 1 (best) BASIC15.02■□□□□ -0
Limk2O54785 Zdhhc23-202ENSMUST00000165648 1278 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Limk2O54785 Pde6g-201ENSMUST00000026452 900 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Limk2O54785 Aga-201ENSMUST00000033920 1181 ntAPPRIS P3 TSL 1 (best) BASIC15.02■□□□□ -0
Limk2O54785 Tfdp2-201ENSMUST00000034982 7354 ntAPPRIS P3 TSL 1 (best) BASIC15.02□□□□□ -0.01
Limk2O54785 Slc24a3-201ENSMUST00000081121 1788 ntAPPRIS P2 TSL 5 BASIC15.02□□□□□ -0.01
Limk2O54785 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC15.02□□□□□ -0.01
Limk2O54785 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC15.02□□□□□ -0.01
Limk2O54785 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Limk2O54785 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Limk2O54785 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Limk2O54785 St3gal3-202ENSMUST00000097912 2143 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Limk2O54785 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC15.02□□□□□ -0.01
Limk2O54785 Krt74-201ENSMUST00000088018 1648 ntAPPRIS P1 TSL 2 BASIC15.02□□□□□ -0.01
Limk2O54785 Gm26578-201ENSMUST00000181702 4611 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Limk2O54785 Lrr1-201ENSMUST00000110621 1500 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Limk2O54785 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Limk2O54785 Rbm15-201ENSMUST00000061772 4343 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Limk2O54785 Gm13410-201ENSMUST00000117058 1415 ntBASIC15.01□□□□□ -0.01
Limk2O54785 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Limk2O54785 Dnajc1-209ENSMUST00000166495 5497 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Limk2O54785 Tmem201-201ENSMUST00000054459 4631 ntAPPRIS ALT2 TSL 2 BASIC15.01□□□□□ -0.01
Limk2O54785 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Limk2O54785 4933412A08Rik-201ENSMUST00000061046 1343 ntBASIC15.01□□□□□ -0.01
Limk2O54785 Mok-202ENSMUST00000070565 1693 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Limk2O54785 Nup88-202ENSMUST00000108530 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Limk2O54785 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Limk2O54785 Ltc4s-202ENSMUST00000102772 649 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Limk2O54785 Cops9-202ENSMUST00000112999 653 ntTSL 3 BASIC15.01□□□□□ -0.01
Limk2O54785 Ube2v2-202ENSMUST00000115776 1236 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Limk2O54785 Gm8597-201ENSMUST00000191525 1109 ntBASIC15.01□□□□□ -0.01
Limk2O54785 Nmur1-202ENSMUST00000212058 1287 ntAPPRIS P3 TSL 5 BASIC15.01□□□□□ -0.01
Limk2O54785 Lce1f-201ENSMUST00000047153 728 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Limk2O54785 Pcna-ps2-201ENSMUST00000088040 1257 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
Limk2O54785 Pdzd11-201ENSMUST00000015812 1626 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Limk2O54785 Acsl3-201ENSMUST00000035779 3950 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Limk2O54785 Spsb1-203ENSMUST00000105685 1537 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Limk2O54785 Grk5-201ENSMUST00000003313 3165 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Limk2O54785 Slc27a5-202ENSMUST00000120903 1468 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Limk2O54785 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC15.01□□□□□ -0.01
Limk2O54785 Abhd16b-201ENSMUST00000069649 1775 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
Limk2O54785 Tbc1d20-201ENSMUST00000028963 3386 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Limk2O54785 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Limk2O54785 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC15□□□□□ -0.01
Limk2O54785 Adarb1-202ENSMUST00000098374 6584 ntTSL 1 (best) BASIC15□□□□□ -0.01
Limk2O54785 Akirin2-201ENSMUST00000084299 1397 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Limk2O54785 Gm5105-201ENSMUST00000053318 1665 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Limk2O54785 Rab23-201ENSMUST00000088287 4322 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Limk2O54785 2510009E07Rik-201ENSMUST00000053336 5164 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Limk2O54785 Ghdc-201ENSMUST00000017891 2462 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Limk2O54785 Ntng2-204ENSMUST00000102873 1593 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Limk2O54785 Pnliprp2-201ENSMUST00000026081 1567 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Limk2O54785 Trav13-3-201ENSMUST00000117226 336 ntBASIC15□□□□□ -0.01
Limk2O54785 Gm9385-201ENSMUST00000117563 472 ntBASIC15□□□□□ -0.01
Limk2O54785 Gm11745-201ENSMUST00000121669 448 ntBASIC15□□□□□ -0.01
Limk2O54785 Gm27321-201ENSMUST00000185021 205 ntBASIC15□□□□□ -0.01
Limk2O54785 Hnrnpa1l2-ps2-201ENSMUST00000022493 963 ntBASIC15□□□□□ -0.01
Limk2O54785 Alkbh7-201ENSMUST00000002737 917 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Limk2O54785 C1qtnf2-201ENSMUST00000057679 1211 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
Limk2O54785 Smim4-202ENSMUST00000064032 791 ntTSL 3 BASIC15□□□□□ -0.01
Limk2O54785 Lrriq4-202ENSMUST00000108267 2387 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
Limk2O54785 Gm9768-201ENSMUST00000206007 2861 ntBASIC15□□□□□ -0.01
Limk2O54785 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC15□□□□□ -0.01
Limk2O54785 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Limk2O54785 Arhgap11a-204ENSMUST00000110949 4458 ntAPPRIS P2 TSL 5 BASIC15□□□□□ -0.01
Limk2O54785 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Limk2O54785 Eif2d-202ENSMUST00000068805 2009 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Limk2O54785 Cyp4f18-201ENSMUST00000003574 1702 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Limk2O54785 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Limk2O54785 Csnk2a2-201ENSMUST00000056919 3773 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Limk2O54785 Upk1a-201ENSMUST00000006476 1421 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Limk2O54785 Gm3252-201ENSMUST00000165619 1949 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
Limk2O54785 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Limk2O54785 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Limk2O54785 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Limk2O54785 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Limk2O54785 Sp2-203ENSMUST00000107624 3055 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Limk2O54785 Crmp1-202ENSMUST00000114158 3051 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Limk2O54785 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Limk2O54785 P2rx3-203ENSMUST00000111616 1315 ntTSL 5 BASIC14.99□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 28.9 ms