Protein–RNA interactions for Protein: O35604

Npc1, Niemann-Pick C1 protein, mousemouse

Predictions only

Length 1,277 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Npc1O35604 Hs3st3a1-201ENSMUST00000058652 3939 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Npc1O35604 Mpped1-201ENSMUST00000046168 3265 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Npc1O35604 Map4k5-202ENSMUST00000110567 4250 ntTSL 5 BASIC14.47□□□□□ -0.09
Npc1O35604 Itgav-202ENSMUST00000111740 6788 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
Npc1O35604 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Npc1O35604 Mlec-201ENSMUST00000112121 5955 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Npc1O35604 Camk2d-204ENSMUST00000106400 2722 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
Npc1O35604 Dbn1-203ENSMUST00000109923 2940 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
Npc1O35604 Hs3st3b1-201ENSMUST00000094103 4911 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Npc1O35604 Bri3bp-201ENSMUST00000049040 6473 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Npc1O35604 Map4-201ENSMUST00000035055 6091 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
Npc1O35604 Dok7-201ENSMUST00000050709 2498 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Npc1O35604 Slc39a14-201ENSMUST00000022688 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Npc1O35604 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
Npc1O35604 Adrb3-203ENSMUST00000121838 1864 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Npc1O35604 Gm23935-201ENSMUST00000102303 57 ntBASIC14.47□□□□□ -0.09
Npc1O35604 Gm24270-201ENSMUST00000102326 57 ntBASIC14.47□□□□□ -0.09
Npc1O35604 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Npc1O35604 Gm12892-201ENSMUST00000117367 1146 ntBASIC14.47□□□□□ -0.09
Npc1O35604 Gm16151-201ENSMUST00000129696 639 ntTSL 3 BASIC14.47□□□□□ -0.09
Npc1O35604 Nudt6-208ENSMUST00000146324 1264 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Npc1O35604 Gm24245-201ENSMUST00000157318 57 ntBASIC14.47□□□□□ -0.09
Npc1O35604 Gm26308-201ENSMUST00000157768 69 ntBASIC14.47□□□□□ -0.09
Npc1O35604 AC121788.1-202ENSMUST00000218801 871 ntTSL 5 BASIC14.47□□□□□ -0.09
Npc1O35604 AC124549.3-201ENSMUST00000225541 367 ntBASIC14.47□□□□□ -0.09
Npc1O35604 Ndufb6-201ENSMUST00000095128 659 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Npc1O35604 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
Npc1O35604 Kdm4b-202ENSMUST00000086835 4360 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
Npc1O35604 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Npc1O35604 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC14.47□□□□□ -0.09
Npc1O35604 Nfya-206ENSMUST00000160319 1407 ntTSL 5 BASIC14.47□□□□□ -0.09
Npc1O35604 Cdkn1b-201ENSMUST00000003115 2393 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Npc1O35604 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Npc1O35604 Btaf1-201ENSMUST00000099494 7204 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Npc1O35604 Ahctf1-201ENSMUST00000027768 8506 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Npc1O35604 Nrn1-204ENSMUST00000224323 1779 ntBASIC14.47□□□□□ -0.09
Npc1O35604 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Npc1O35604 Lrp4-201ENSMUST00000028689 7926 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Npc1O35604 Ltv1-201ENSMUST00000019950 2297 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Npc1O35604 Plxnc1-201ENSMUST00000099337 7302 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Npc1O35604 Txnrd1-206ENSMUST00000219442 3531 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
Npc1O35604 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Npc1O35604 Aarsd1-201ENSMUST00000070395 1516 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Npc1O35604 Zbtb33-202ENSMUST00000115142 2567 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Npc1O35604 Pcyt1a-202ENSMUST00000104893 4951 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
Npc1O35604 Chtf8-202ENSMUST00000175940 2890 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Npc1O35604 Sfta3-ps-205ENSMUST00000220379 2187 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Npc1O35604 4930513N10Rik-203ENSMUST00000145562 2803 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Npc1O35604 Etfrf1-204ENSMUST00000111723 842 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
Npc1O35604 Gm16198-201ENSMUST00000118766 670 ntBASIC14.46□□□□□ -0.09
Npc1O35604 Ms4a6d-202ENSMUST00000125291 679 ntTSL 3 BASIC14.46□□□□□ -0.09
Npc1O35604 Haghl-211ENSMUST00000150324 1267 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Npc1O35604 Fam71e1-204ENSMUST00000205422 366 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Npc1O35604 Golim4-201ENSMUST00000038563 5546 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
Npc1O35604 C1qa-201ENSMUST00000046285 1040 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Npc1O35604 Epc1-202ENSMUST00000050542 565 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Npc1O35604 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Npc1O35604 Prdm5-203ENSMUST00000081219 984 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Npc1O35604 Msi1-208ENSMUST00000150779 3133 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Npc1O35604 Brd7-201ENSMUST00000034085 3625 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Npc1O35604 Rexo4-201ENSMUST00000064244 2281 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Npc1O35604 Tomm70a-201ENSMUST00000166897 3778 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Npc1O35604 Zfp12-201ENSMUST00000032591 5265 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Npc1O35604 Sept8-202ENSMUST00000117061 4563 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
Npc1O35604 Ralgds-201ENSMUST00000028170 3590 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
Npc1O35604 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Npc1O35604 Adora2a-201ENSMUST00000105420 2596 ntAPPRIS P1 TSL 3 BASIC14.46□□□□□ -0.09
Npc1O35604 Vsig10-202ENSMUST00000111967 4236 ntAPPRIS P2 TSL 5 BASIC14.46□□□□□ -0.09
Npc1O35604 Cacna2d3-201ENSMUST00000022567 3695 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Npc1O35604 CN725425-202ENSMUST00000190436 2041 ntAPPRIS P5 TSL 5 BASIC14.46□□□□□ -0.1
Npc1O35604 Ccdc42-203ENSMUST00000154294 1384 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.1
Npc1O35604 Pycrl-201ENSMUST00000053918 1353 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Npc1O35604 Acot10-201ENSMUST00000052910 1537 ntAPPRIS P1 BASIC14.46□□□□□ -0.1
Npc1O35604 Map6d1-201ENSMUST00000040880 3273 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Npc1O35604 Ankhd1-214ENSMUST00000155329 8223 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Npc1O35604 Ube2o-201ENSMUST00000082152 5205 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Npc1O35604 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Npc1O35604 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Npc1O35604 Slc22a18-202ENSMUST00000105917 1552 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Npc1O35604 Flrt2-202ENSMUST00000110117 3223 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Npc1O35604 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Npc1O35604 Gm10244-202ENSMUST00000156905 474 ntTSL 3 BASIC14.45□□□□□ -0.1
Npc1O35604 Gm17455-201ENSMUST00000164428 855 ntAPPRIS P1 TSL 3 BASIC14.45□□□□□ -0.1
Npc1O35604 Gm43397-201ENSMUST00000196422 481 ntTSL 3 BASIC14.45□□□□□ -0.1
Npc1O35604 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Npc1O35604 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Npc1O35604 Chchd1-203ENSMUST00000224633 557 ntBASIC14.45□□□□□ -0.1
Npc1O35604 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Npc1O35604 Pde6g-201ENSMUST00000026452 900 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Npc1O35604 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Npc1O35604 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC14.45□□□□□ -0.1
Npc1O35604 Las1l-201ENSMUST00000079987 2530 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Npc1O35604 Zbtb20-202ENSMUST00000114690 2759 ntAPPRIS ALT1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Npc1O35604 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Npc1O35604 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Npc1O35604 Stxbp1-201ENSMUST00000050000 3892 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Npc1O35604 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Npc1O35604 Crb2-201ENSMUST00000050372 6372 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Npc1O35604 Mospd2-201ENSMUST00000004715 2015 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Npc1O35604 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 25.8 ms