Protein–RNA interactions for Protein: O35449

Prrt1, Proline-rich transmembrane protein 1, mousemouse

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prrt1O35449 Tuft1-203ENSMUST00000196655 2156 ntTSL 5 BASIC12.55□□□□□ -0.4
Prrt1O35449 Zfp57-211ENSMUST00000174524 1747 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Prrt1O35449 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Prrt1O35449 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Prrt1O35449 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC12.55□□□□□ -0.4
Prrt1O35449 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC12.55□□□□□ -0.4
Prrt1O35449 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
Prrt1O35449 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC12.55□□□□□ -0.4
Prrt1O35449 AC158538.2-201ENSMUST00000225455 906 ntBASIC12.55□□□□□ -0.4
Prrt1O35449 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Prrt1O35449 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Prrt1O35449 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Prrt1O35449 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
Prrt1O35449 Hoxc4-201ENSMUST00000100164 1983 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Prrt1O35449 Vta1-205ENSMUST00000154132 1974 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Prrt1O35449 Myo19-202ENSMUST00000093969 4091 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Prrt1O35449 Gucy2e-201ENSMUST00000021259 8331 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Prrt1O35449 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Prrt1O35449 Kcnj12-201ENSMUST00000041944 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Prrt1O35449 Erg-206ENSMUST00000122199 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Prrt1O35449 Adck5-214ENSMUST00000162503 2040 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Prrt1O35449 3110082I17Rik-204ENSMUST00000198474 2030 ntTSL 2 BASIC12.55□□□□□ -0.4
Prrt1O35449 Slc7a7-206ENSMUST00000197440 2278 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Prrt1O35449 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Prrt1O35449 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Prrt1O35449 Dnajb5-204ENSMUST00000107973 2300 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Prrt1O35449 Tspyl1-201ENSMUST00000061372 3086 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
Prrt1O35449 Rtkn-202ENSMUST00000087938 3080 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Prrt1O35449 Lzts3-203ENSMUST00000110260 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Prrt1O35449 Trappc9-203ENSMUST00000168191 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Prrt1O35449 Yap1-201ENSMUST00000065353 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Prrt1O35449 Neurl1a-201ENSMUST00000111807 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Prrt1O35449 Kpna6-201ENSMUST00000003828 2195 ntAPPRIS ALT1 TSL 5 BASIC12.54□□□□□ -0.4
Prrt1O35449 Cdk19-202ENSMUST00000095743 3973 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Prrt1O35449 Fam174a-202ENSMUST00000186780 3460 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Prrt1O35449 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC12.54□□□□□ -0.4
Prrt1O35449 Ccdc8-201ENSMUST00000094805 4809 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Prrt1O35449 Abl2-201ENSMUST00000027888 3549 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Prrt1O35449 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Prrt1O35449 Igha-202ENSMUST00000194738 2540 ntAPPRIS P5 BASIC12.54□□□□□ -0.4
Prrt1O35449 Fam46a-201ENSMUST00000034802 5479 ntAPPRIS P3 TSL 3 BASIC12.54□□□□□ -0.4
Prrt1O35449 Iffo1-201ENSMUST00000117675 2833 ntAPPRIS P4 TSL 1 (best) BASIC12.54□□□□□ -0.4
Prrt1O35449 Dysf-214ENSMUST00000204354 6432 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Prrt1O35449 Igsf8-204ENSMUST00000139528 2866 ntTSL 2 BASIC12.54□□□□□ -0.4
Prrt1O35449 Alg10b-201ENSMUST00000100309 3727 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Prrt1O35449 Ubc-202ENSMUST00000136312 2618 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Prrt1O35449 Zmym4-201ENSMUST00000106108 7102 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Prrt1O35449 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Prrt1O35449 Gm45293-201ENSMUST00000209754 1812 ntBASIC12.54□□□□□ -0.4
Prrt1O35449 Ncor2-206ENSMUST00000111402 8862 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Prrt1O35449 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC12.54□□□□□ -0.4
Prrt1O35449 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC12.54□□□□□ -0.4
Prrt1O35449 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC12.54□□□□□ -0.4
Prrt1O35449 Gm8344-201ENSMUST00000119813 856 ntBASIC12.54□□□□□ -0.4
Prrt1O35449 Gm13559-201ENSMUST00000120476 863 ntBASIC12.54□□□□□ -0.4
Prrt1O35449 AC117588.1-201ENSMUST00000228510 999 ntBASIC12.54□□□□□ -0.4
Prrt1O35449 Ctps-201ENSMUST00000030381 2705 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Prrt1O35449 Wsb1-201ENSMUST00000017821 2476 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Prrt1O35449 Yes1-201ENSMUST00000072311 4586 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Prrt1O35449 Zfp639-205ENSMUST00000193287 2211 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Prrt1O35449 Ndufv1-201ENSMUST00000042497 1661 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Prrt1O35449 Cbln4-201ENSMUST00000087950 2902 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Prrt1O35449 Zfp566-201ENSMUST00000088785 1709 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Prrt1O35449 Supt6-201ENSMUST00000002121 6488 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Prrt1O35449 Aatk-201ENSMUST00000064307 5336 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Prrt1O35449 9330182L06Rik-202ENSMUST00000115348 3403 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Prrt1O35449 Fkbp10-202ENSMUST00000107400 1467 ntTSL 5 BASIC12.53□□□□□ -0.4
Prrt1O35449 Hdac5-203ENSMUST00000107151 4852 ntTSL 5 BASIC12.53□□□□□ -0.4
Prrt1O35449 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Prrt1O35449 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Prrt1O35449 Zfp36l1-201ENSMUST00000021552 2990 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Prrt1O35449 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Prrt1O35449 Zfp109-201ENSMUST00000037448 1935 ntAPPRIS P2 TSL 5 BASIC12.53□□□□□ -0.4
Prrt1O35449 Ick-203ENSMUST00000117330 2698 ntAPPRIS ALT2 TSL 2 BASIC12.53□□□□□ -0.4
Prrt1O35449 Atp2a3-203ENSMUST00000108485 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Prrt1O35449 Mir770-201ENSMUST00000103252 94 ntBASIC12.53□□□□□ -0.4
Prrt1O35449 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Prrt1O35449 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC12.53□□□□□ -0.4
Prrt1O35449 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Prrt1O35449 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC12.53□□□□□ -0.4
Prrt1O35449 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Prrt1O35449 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
Prrt1O35449 Nrp2-204ENSMUST00000102822 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Prrt1O35449 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Prrt1O35449 Mtif2-202ENSMUST00000093239 2741 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Prrt1O35449 Dzip1-202ENSMUST00000047208 4476 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.4
Prrt1O35449 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC12.52□□□□□ -0.4
Prrt1O35449 Mpped1-203ENSMUST00000109470 3281 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Prrt1O35449 Map7d1-201ENSMUST00000061143 3351 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.4
Prrt1O35449 Ceacam16-201ENSMUST00000014830 1635 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Prrt1O35449 Lrp8os2-204ENSMUST00000188737 3078 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Prrt1O35449 Mllt10-203ENSMUST00000114671 5063 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Prrt1O35449 Arhgef25-202ENSMUST00000167353 2189 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Prrt1O35449 Gm19863-201ENSMUST00000192480 2218 ntBASIC12.52□□□□□ -0.41
Prrt1O35449 Usp51-201ENSMUST00000095755 2204 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Prrt1O35449 Angel2-202ENSMUST00000066632 3714 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Prrt1O35449 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Prrt1O35449 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC12.52□□□□□ -0.41
Prrt1O35449 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC12.52□□□□□ -0.41
Prrt1O35449 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC12.52□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 25.6 ms