Protein–RNA interactions for Protein: O35350

Capn1, Calpain-1 catalytic subunit, mousemouse

Predictions only

Length 713 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Capn1O35350 Ptprk-201ENSMUST00000166468 6177 ntAPPRIS P2 TSL 2 BASIC13.75□□□□□ -0.21
Capn1O35350 Kif21b-201ENSMUST00000075164 9115 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
Capn1O35350 Fam126b-201ENSMUST00000038372 2385 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Capn1O35350 Zgpat-201ENSMUST00000029105 2293 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Capn1O35350 Mief1-202ENSMUST00000166030 2712 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Capn1O35350 Gm7669-201ENSMUST00000210184 1603 ntBASIC13.75□□□□□ -0.21
Capn1O35350 Ing4-201ENSMUST00000032480 1629 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Capn1O35350 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC13.75□□□□□ -0.21
Capn1O35350 Car10-205ENSMUST00000107861 2613 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Capn1O35350 Gm29361-201ENSMUST00000183323 2000 ntBASIC13.74□□□□□ -0.21
Capn1O35350 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Capn1O35350 Susd3-202ENSMUST00000058196 1418 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
Capn1O35350 Mst1-201ENSMUST00000035211 2262 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Capn1O35350 Acd-201ENSMUST00000042608 3154 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Capn1O35350 Apc-202ENSMUST00000079362 8867 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Capn1O35350 Mef2b-204ENSMUST00000110146 1342 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
Capn1O35350 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Capn1O35350 Phospho2-202ENSMUST00000112266 2194 ntAPPRIS P1 TSL 3 BASIC13.74□□□□□ -0.21
Capn1O35350 Ifna12-201ENSMUST00000102806 797 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
Capn1O35350 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Capn1O35350 Znhit1-204ENSMUST00000111091 1070 ntTSL 5 BASIC13.74□□□□□ -0.21
Capn1O35350 Gm6226-201ENSMUST00000117765 1146 ntBASIC13.74□□□□□ -0.21
Capn1O35350 Gm14722-201ENSMUST00000118943 689 ntBASIC13.74□□□□□ -0.21
Capn1O35350 Pfn2-203ENSMUST00000120289 905 ntTSL 2 BASIC13.74□□□□□ -0.21
Capn1O35350 Lgals3-204ENSMUST00000150290 1298 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Capn1O35350 Bcl2l2-204ENSMUST00000172844 498 ntTSL 5 BASIC13.74□□□□□ -0.21
Capn1O35350 Cldn25-ps-201ENSMUST00000197641 693 ntBASIC13.74□□□□□ -0.21
Capn1O35350 Gm30684-201ENSMUST00000205632 600 ntTSL 3 BASIC13.74□□□□□ -0.21
Capn1O35350 9430081H08Rik-201ENSMUST00000217460 818 ntBASIC13.74□□□□□ -0.21
Capn1O35350 3110079O15Rik-201ENSMUST00000027476 478 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Capn1O35350 Lce1f-201ENSMUST00000047153 728 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Capn1O35350 Gopc-201ENSMUST00000020008 4216 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Capn1O35350 Ids-201ENSMUST00000101509 4972 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Capn1O35350 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Capn1O35350 Dcaf17-201ENSMUST00000064141 1905 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Capn1O35350 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Capn1O35350 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Capn1O35350 Rnd1-201ENSMUST00000003451 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Capn1O35350 Pcdh7-203ENSMUST00000191837 8785 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Capn1O35350 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Capn1O35350 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Capn1O35350 Siglece-201ENSMUST00000032667 1849 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Capn1O35350 Tmem237-201ENSMUST00000087475 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Capn1O35350 Ptger1-201ENSMUST00000019608 4694 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Capn1O35350 D1Pas1-201ENSMUST00000045108 3212 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
Capn1O35350 Arid3c-201ENSMUST00000084698 1417 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
Capn1O35350 Zswim8-204ENSMUST00000223840 5674 ntAPPRIS ALT2 BASIC13.73□□□□□ -0.21
Capn1O35350 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Capn1O35350 Stk33-202ENSMUST00000106745 2410 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Capn1O35350 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Capn1O35350 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Capn1O35350 Ablim2-202ENSMUST00000101280 3042 ntTSL 5 BASIC13.73□□□□□ -0.21
Capn1O35350 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Capn1O35350 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Capn1O35350 Gm26517-201ENSMUST00000181279 1172 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Capn1O35350 Psmg3-202ENSMUST00000182602 733 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Capn1O35350 Arfgap1-213ENSMUST00000184394 1209 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
Capn1O35350 Gm10576-201ENSMUST00000191927 825 ntBASIC13.73□□□□□ -0.21
Capn1O35350 Lmo4-207ENSMUST00000196264 1263 ntTSL 5 BASIC13.73□□□□□ -0.21
Capn1O35350 Gm20553-201ENSMUST00000204205 844 ntBASIC13.73□□□□□ -0.21
Capn1O35350 Sbk2-201ENSMUST00000032598 1139 ntAPPRIS P1 TSL 3 BASIC13.73□□□□□ -0.21
Capn1O35350 Erich4-201ENSMUST00000098663 911 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Capn1O35350 Hsp90b1-201ENSMUST00000020238 2825 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Capn1O35350 Tpgs2-202ENSMUST00000148255 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Capn1O35350 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Capn1O35350 Mms22l-201ENSMUST00000050446 4261 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Capn1O35350 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Capn1O35350 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Capn1O35350 Sall2-202ENSMUST00000135523 4773 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Capn1O35350 Steap2-202ENSMUST00000115424 3285 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Capn1O35350 Sorbs1-208ENSMUST00000224247 2688 ntAPPRIS ALT2 BASIC13.73□□□□□ -0.21
Capn1O35350 Fam133b-201ENSMUST00000115527 1491 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Capn1O35350 Slc8a2-202ENSMUST00000211649 5261 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
Capn1O35350 G2e3-202ENSMUST00000119211 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Capn1O35350 Clec16a-211ENSMUST00000155633 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Capn1O35350 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Capn1O35350 Hps5-201ENSMUST00000014562 4953 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
Capn1O35350 Gm13332-201ENSMUST00000120451 1398 ntBASIC13.72□□□□□ -0.21
Capn1O35350 Tex264-201ENSMUST00000046735 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Capn1O35350 Rhbdl1-202ENSMUST00000183929 1349 ntTSL 5 BASIC13.72□□□□□ -0.21
Capn1O35350 Xylt2-201ENSMUST00000116349 3442 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Capn1O35350 Cant1-201ENSMUST00000017620 4182 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Capn1O35350 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
Capn1O35350 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
Capn1O35350 Enah-204ENSMUST00000111030 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Capn1O35350 Gm12008-201ENSMUST00000117791 755 ntBASIC13.72□□□□□ -0.21
Capn1O35350 Gm13365-201ENSMUST00000121188 973 ntBASIC13.72□□□□□ -0.21
Capn1O35350 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Capn1O35350 Gm15758-201ENSMUST00000161681 695 ntTSL 5 BASIC13.72□□□□□ -0.21
Capn1O35350 Gm10605-201ENSMUST00000182342 665 ntTSL 3 BASIC13.72□□□□□ -0.21
Capn1O35350 Rian-216ENSMUST00000183215 880 ntTSL 3 BASIC13.72□□□□□ -0.21
Capn1O35350 Nckipsd-206ENSMUST00000195323 467 ntTSL 3 BASIC13.72□□□□□ -0.21
Capn1O35350 AC160980.1-201ENSMUST00000224136 970 ntBASIC13.72□□□□□ -0.21
Capn1O35350 Lin37-201ENSMUST00000043975 998 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Capn1O35350 Crygn-201ENSMUST00000047119 768 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Capn1O35350 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Capn1O35350 Gm9789-201ENSMUST00000062524 397 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
Capn1O35350 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC13.72□□□□□ -0.21
Capn1O35350 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Capn1O35350 Nrn1-204ENSMUST00000224323 1779 ntBASIC13.72□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 54.6 ms