Protein–RNA interactions for Protein: O09111

Ndufb11, NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 11, mitochondrial, mousemouse

Predictions only

Length 151 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ndufb11O09111 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Ndufb11O09111 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Ndufb11O09111 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Ndufb11O09111 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Ndufb11O09111 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Ndufb11O09111 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
Ndufb11O09111 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
Ndufb11O09111 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Ndufb11O09111 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Ndufb11O09111 Sept4-201ENSMUST00000018544 1726 ntAPPRIS P2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Ndufb11O09111 Ablim1-202ENSMUST00000099294 6232 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
Ndufb11O09111 Sfpq-201ENSMUST00000030623 3465 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Ndufb11O09111 Kcna5-201ENSMUST00000060972 2862 ntAPPRIS P1 BASIC11.88□□□□□ -0.51
Ndufb11O09111 Szrd1-203ENSMUST00000102487 3244 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Ndufb11O09111 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Ndufb11O09111 Hoxa7-201ENSMUST00000048715 2009 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ndufb11O09111 Ly6h-207ENSMUST00000163116 2801 ntAPPRIS ALT1 TSL 2 BASIC11.87□□□□□ -0.51
Ndufb11O09111 Nol10-201ENSMUST00000046011 3021 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ndufb11O09111 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Ndufb11O09111 Catip-204ENSMUST00000191010 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ndufb11O09111 Ilvbl-201ENSMUST00000105384 2329 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ndufb11O09111 Ilvbl-203ENSMUST00000218215 2331 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Ndufb11O09111 Fundc1-201ENSMUST00000026016 1983 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ndufb11O09111 Ptpn1-201ENSMUST00000029053 4213 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ndufb11O09111 Ints7-201ENSMUST00000045450 5347 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ndufb11O09111 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ndufb11O09111 Tmprss11d-202ENSMUST00000122377 2256 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Ndufb11O09111 Mir6404-201ENSMUST00000183699 94 ntBASIC11.87□□□□□ -0.51
Ndufb11O09111 Gm38027-201ENSMUST00000192315 235 ntBASIC11.87□□□□□ -0.51
Ndufb11O09111 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ndufb11O09111 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC11.87□□□□□ -0.51
Ndufb11O09111 Gm7791-201ENSMUST00000219066 539 ntBASIC11.87□□□□□ -0.51
Ndufb11O09111 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC11.87□□□□□ -0.51
Ndufb11O09111 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ndufb11O09111 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Ndufb11O09111 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ndufb11O09111 Bhmt-201ENSMUST00000099309 2490 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ndufb11O09111 Gpsm1-204ENSMUST00000114134 2043 ntTSL 3 BASIC11.87□□□□□ -0.51
Ndufb11O09111 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Ndufb11O09111 Phactr3-202ENSMUST00000103066 2680 ntAPPRIS P4 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ndufb11O09111 Mllt10-203ENSMUST00000114671 5063 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Ndufb11O09111 Acap2-201ENSMUST00000058033 6493 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ndufb11O09111 Rab37-201ENSMUST00000021076 2210 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ndufb11O09111 Fzd1-201ENSMUST00000054294 4197 ntAPPRIS P1 BASIC11.87□□□□□ -0.51
Ndufb11O09111 Dido1-202ENSMUST00000087517 8723 ntAPPRIS P4 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ndufb11O09111 Ppp4r3b-202ENSMUST00000102856 2410 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Ndufb11O09111 Trim32-202ENSMUST00000107366 3191 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ndufb11O09111 Bcl11b-201ENSMUST00000066060 8111 ntAPPRIS P4 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ndufb11O09111 AC126250.1-201ENSMUST00000228343 1768 ntBASIC11.87□□□□□ -0.51
Ndufb11O09111 Gsdmd-201ENSMUST00000023238 1776 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ndufb11O09111 Ube2g1-203ENSMUST00000138247 3931 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Ndufb11O09111 Ahcy-201ENSMUST00000054607 2543 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ndufb11O09111 Nop56-202ENSMUST00000103198 1877 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ndufb11O09111 Vwc2-202ENSMUST00000109681 3371 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ndufb11O09111 Rubcn-204ENSMUST00000119810 3371 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
Ndufb11O09111 Sbk1-201ENSMUST00000056028 4109 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ndufb11O09111 Mief1-201ENSMUST00000023048 5081 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ndufb11O09111 Grk6-203ENSMUST00000224118 1997 ntAPPRIS ALT2 BASIC11.87□□□□□ -0.51
Ndufb11O09111 Crybg2-213ENSMUST00000227683 5578 ntAPPRIS ALT2 BASIC11.86□□□□□ -0.51
Ndufb11O09111 Kcnj9-202ENSMUST00000194204 2265 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ndufb11O09111 Ints8-203ENSMUST00000108319 3220 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ndufb11O09111 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ndufb11O09111 Klhl8-203ENSMUST00000112815 2898 ntTSL 5 BASIC11.86□□□□□ -0.51
Ndufb11O09111 Kbtbd6-202ENSMUST00000226192 2984 ntAPPRIS P2 BASIC11.86□□□□□ -0.51
Ndufb11O09111 Zfp639-205ENSMUST00000193287 2211 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ndufb11O09111 Shmt2-206ENSMUST00000219239 2238 ntAPPRIS ALT1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ndufb11O09111 Sarm1-201ENSMUST00000061174 4083 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ndufb11O09111 Tnpo2-202ENSMUST00000166592 4884 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
Ndufb11O09111 Il7-205ENSMUST00000194279 4858 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ndufb11O09111 Pgghg-204ENSMUST00000164580 3001 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
Ndufb11O09111 Map6-201ENSMUST00000068973 3430 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ndufb11O09111 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ndufb11O09111 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC11.86□□□□□ -0.51
Ndufb11O09111 Gm7556-201ENSMUST00000201178 1084 ntBASIC11.86□□□□□ -0.51
Ndufb11O09111 Gm10493-201ENSMUST00000097270 612 ntBASIC11.86□□□□□ -0.51
Ndufb11O09111 Larp4b-202ENSMUST00000188211 5610 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ndufb11O09111 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ndufb11O09111 Fcgr1-201ENSMUST00000029748 2589 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ndufb11O09111 Lysmd4-201ENSMUST00000058771 2898 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ndufb11O09111 Ntrk2-204ENSMUST00000224259 3049 ntBASIC11.86□□□□□ -0.51
Ndufb11O09111 Traf2-201ENSMUST00000028311 3044 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ndufb11O09111 Sh3bp5-202ENSMUST00000100730 2633 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ndufb11O09111 Spata21-201ENSMUST00000051907 2526 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ndufb11O09111 Gdap1l1-201ENSMUST00000018087 2220 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ndufb11O09111 Il20ra-201ENSMUST00000020185 2105 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ndufb11O09111 Elovl1-201ENSMUST00000006557 1811 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ndufb11O09111 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ndufb11O09111 Rinl-201ENSMUST00000059857 2871 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Ndufb11O09111 Chd1-202ENSMUST00000024627 7916 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Ndufb11O09111 Cfap69-201ENSMUST00000054865 4956 ntAPPRIS P2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Ndufb11O09111 Map10-201ENSMUST00000053078 3542 ntAPPRIS P1 BASIC11.85□□□□□ -0.51
Ndufb11O09111 Tcf4-210ENSMUST00000128706 2066 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Ndufb11O09111 AC121801.1-201ENSMUST00000225363 1899 ntBASIC11.85□□□□□ -0.51
Ndufb11O09111 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC11.85□□□□□ -0.51
Ndufb11O09111 Spock3-201ENSMUST00000093480 3024 ntAPPRIS P3 TSL 5 BASIC11.85□□□□□ -0.51
Ndufb11O09111 Acaa1b-201ENSMUST00000010795 1689 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Ndufb11O09111 Edil3-203ENSMUST00000118731 2721 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Ndufb11O09111 Lpcat1-201ENSMUST00000022099 3675 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Ndufb11O09111 Dhx58-201ENSMUST00000017974 2412 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Ndufb11O09111 Hps3-202ENSMUST00000108321 3385 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 38.9 ms