Protein–RNA interactions for Protein: O08811

Ercc2, General transcription and DNA repair factor IIH helicase subunit XPD, mousemouse

Known RBP Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ercc2O08811 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Ercc2O08811 Guca1b-201ENSMUST00000024774 1668 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ercc2O08811 Morc4-201ENSMUST00000033811 4412 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ercc2O08811 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
Ercc2O08811 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ercc2O08811 Zdhhc25-201ENSMUST00000066949 1368 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
Ercc2O08811 Ifna12-201ENSMUST00000102806 797 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
Ercc2O08811 A230065H16Rik-201ENSMUST00000150384 670 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ercc2O08811 Cby3-202ENSMUST00000164067 731 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
Ercc2O08811 H2-Bl-211ENSMUST00000195838 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ercc2O08811 Irs3-202ENSMUST00000196511 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ercc2O08811 Msrb2-201ENSMUST00000023856 1196 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ercc2O08811 Rbpms-202ENSMUST00000033995 1039 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ercc2O08811 Gm10175-201ENSMUST00000086013 645 ntBASIC15.17■□□□□ 0.02
Ercc2O08811 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC15.17■□□□□ 0.02
Ercc2O08811 Arhgap44-203ENSMUST00000093002 3982 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
Ercc2O08811 Slc25a19-201ENSMUST00000021089 2307 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ercc2O08811 Hsph1-209ENSMUST00000202089 3054 ntTSL 5 BASIC15.17■□□□□ 0.02
Ercc2O08811 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Ercc2O08811 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ercc2O08811 Carlr-201ENSMUST00000181515 2574 ntBASIC15.17■□□□□ 0.02
Ercc2O08811 Tgfbr2-202ENSMUST00000061101 8092 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Ercc2O08811 Gsg1-201ENSMUST00000087729 1307 ntAPPRIS P4 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ercc2O08811 Mfsd2a-201ENSMUST00000030408 2151 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ercc2O08811 Dnajc27-202ENSMUST00000049584 2934 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
Ercc2O08811 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ercc2O08811 Trim63-201ENSMUST00000030638 1855 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
Ercc2O08811 D17Wsu92e-202ENSMUST00000114859 3522 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ercc2O08811 P4ha2-201ENSMUST00000019050 2230 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
Ercc2O08811 Inha-201ENSMUST00000037330 1475 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ercc2O08811 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ercc2O08811 Zufsp-205ENSMUST00000218880 2005 ntTSL 5 BASIC15.16■□□□□ 0.02
Ercc2O08811 Poli-201ENSMUST00000043286 2591 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Ercc2O08811 Cxcl10-202ENSMUST00000118006 1353 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Ercc2O08811 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ercc2O08811 4930513N10Rik-203ENSMUST00000145562 2803 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Ercc2O08811 Park7-204ENSMUST00000105675 882 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
Ercc2O08811 Sfxn5-203ENSMUST00000113787 638 ntTSL 2 BASIC15.16■□□□□ 0.02
Ercc2O08811 Gm29909-201ENSMUST00000214500 922 ntTSL 5 BASIC15.16■□□□□ 0.02
Ercc2O08811 Zfp707-202ENSMUST00000109967 1703 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ercc2O08811 Zfp184-202ENSMUST00000102978 3198 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
Ercc2O08811 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ercc2O08811 Chaf1b-202ENSMUST00000117099 1894 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
Ercc2O08811 Neurod2-201ENSMUST00000041685 3142 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ercc2O08811 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
Ercc2O08811 Luc7l-203ENSMUST00000119928 1441 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
Ercc2O08811 Lypd1-201ENSMUST00000027582 1447 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Ercc2O08811 Upk1a-201ENSMUST00000006476 1421 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ercc2O08811 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ercc2O08811 Arhgap44-201ENSMUST00000047463 4074 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ercc2O08811 Igdcc4-202ENSMUST00000077696 6361 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
Ercc2O08811 Fam126b-201ENSMUST00000038372 2385 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ercc2O08811 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
Ercc2O08811 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ercc2O08811 Rhpn1-201ENSMUST00000023244 1932 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ercc2O08811 Wdr31-203ENSMUST00000120095 2549 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ercc2O08811 Gm11738-201ENSMUST00000134069 2158 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Ercc2O08811 Edem3-202ENSMUST00000187951 3115 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Ercc2O08811 Oser1-202ENSMUST00000104954 1702 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ercc2O08811 Washc1-201ENSMUST00000072383 2904 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ercc2O08811 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC15.15■□□□□ 0.02
Ercc2O08811 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ercc2O08811 Ceacam16-201ENSMUST00000014830 1635 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ercc2O08811 Tpi1-205ENSMUST00000172132 1607 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ercc2O08811 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC15.15■□□□□ 0.02
Ercc2O08811 Prmt7-203ENSMUST00000109297 1094 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Ercc2O08811 Gm15427-201ENSMUST00000117288 531 ntBASIC15.15■□□□□ 0.02
Ercc2O08811 Rpl18-ps1-201ENSMUST00000121555 525 ntBASIC15.15■□□□□ 0.02
Ercc2O08811 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Ercc2O08811 Edn3-203ENSMUST00000140908 731 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
Ercc2O08811 1600014C10Rik-209ENSMUST00000179992 568 ntTSL 3 BASIC15.15■□□□□ 0.02
Ercc2O08811 Idh2-207ENSMUST00000206714 392 ntTSL 3 BASIC15.15■□□□□ 0.02
Ercc2O08811 CT025555.1-201ENSMUST00000225901 1217 ntBASIC15.15■□□□□ 0.02
Ercc2O08811 Pde6g-201ENSMUST00000026452 900 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ercc2O08811 Rab33a-201ENSMUST00000033430 1158 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ercc2O08811 Timm10b-201ENSMUST00000058333 694 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ercc2O08811 Gm9945-201ENSMUST00000067523 932 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
Ercc2O08811 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ercc2O08811 Olah-201ENSMUST00000027955 1533 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ercc2O08811 Gjd2-201ENSMUST00000090275 2879 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ercc2O08811 Senp6-202ENSMUST00000164859 3853 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ercc2O08811 Usp53-201ENSMUST00000090379 6185 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ercc2O08811 Cab39-202ENSMUST00000113360 3805 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ercc2O08811 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ercc2O08811 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ercc2O08811 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Ercc2O08811 Syndig1-201ENSMUST00000109934 2081 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
Ercc2O08811 Syk-203ENSMUST00000120135 5363 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ercc2O08811 Zfp639-205ENSMUST00000193287 2211 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ercc2O08811 Slc39a4-201ENSMUST00000073428 2224 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ercc2O08811 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ercc2O08811 Sema4c-203ENSMUST00000191677 3779 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
Ercc2O08811 Rgs6-216ENSMUST00000200911 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ercc2O08811 Snx19-201ENSMUST00000164099 5762 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ercc2O08811 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ercc2O08811 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ercc2O08811 Adam9-202ENSMUST00000084035 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ercc2O08811 Dzip3-201ENSMUST00000114516 3331 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ercc2O08811 Crb2-201ENSMUST00000050372 6372 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
Ercc2O08811 6030408B16Rik-202ENSMUST00000191426 1947 ntAPPRIS P5 TSL 1 (best) BASIC15.14■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 29.8 ms