Protein–RNA interactions for Protein: O08791

Ebf3, Transcription factor COE3, mousemouse

Predictions only

Length 596 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf3O08791 Emx2-201ENSMUST00000062216 2916 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Ebf3O08791 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Ebf3O08791 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Ebf3O08791 1700022A21Rik-202ENSMUST00000182910 1448 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Ebf3O08791 Rogdi-201ENSMUST00000023191 1431 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Ebf3O08791 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Ebf3O08791 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Ebf3O08791 Tmem116-204ENSMUST00000111795 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Ebf3O08791 BC037039-201ENSMUST00000192003 2205 ntBASIC15.41■□□□□ 0.06
Ebf3O08791 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Ebf3O08791 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Ebf3O08791 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Ebf3O08791 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
Ebf3O08791 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC15.41■□□□□ 0.06
Ebf3O08791 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Ebf3O08791 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Ebf3O08791 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Ebf3O08791 Sfmbt1-201ENSMUST00000054230 7837 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
Ebf3O08791 Lurap1l-201ENSMUST00000055922 3066 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Ebf3O08791 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Ebf3O08791 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Ebf3O08791 Klhl12-202ENSMUST00000112232 3220 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Ebf3O08791 Spag1-202ENSMUST00000171205 3219 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Ebf3O08791 Mrto4-202ENSMUST00000102503 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Ebf3O08791 Gm25287-201ENSMUST00000103846 110 ntBASIC15.41■□□□□ 0.06
Ebf3O08791 Gm22918-201ENSMUST00000103855 110 ntBASIC15.41■□□□□ 0.06
Ebf3O08791 Dnajc8-205ENSMUST00000105939 746 ntTSL 5 BASIC15.41■□□□□ 0.06
Ebf3O08791 Ppil3-203ENSMUST00000114348 1033 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Ebf3O08791 Gm6973-201ENSMUST00000117080 721 ntBASIC15.41■□□□□ 0.06
Ebf3O08791 Serpinf1-202ENSMUST00000125982 605 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Ebf3O08791 Mvk-206ENSMUST00000137167 1049 ntTSL 2 BASIC15.41■□□□□ 0.06
Ebf3O08791 Gm35911-201ENSMUST00000198837 677 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
Ebf3O08791 Gm39228-201ENSMUST00000212456 301 ntTSL 5 BASIC15.41■□□□□ 0.06
Ebf3O08791 Wdyhv1-206ENSMUST00000227142 786 ntBASIC15.41■□□□□ 0.06
Ebf3O08791 Atad3aos-201ENSMUST00000067628 971 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Ebf3O08791 Gm9768-201ENSMUST00000206007 2861 ntBASIC15.41■□□□□ 0.06
Ebf3O08791 Psmc5-201ENSMUST00000021049 1316 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Ebf3O08791 Zbtb20-202ENSMUST00000114690 2759 ntAPPRIS ALT1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Ebf3O08791 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Ebf3O08791 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Ebf3O08791 Pcdha9-201ENSMUST00000115659 5341 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Ebf3O08791 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Ebf3O08791 Six3os1-212ENSMUST00000177220 5601 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Ebf3O08791 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Ebf3O08791 Ralgds-201ENSMUST00000028170 3590 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
Ebf3O08791 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Ebf3O08791 Gm2788-204ENSMUST00000209288 1966 ntTSL 5 BASIC15.4■□□□□ 0.06
Ebf3O08791 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Ebf3O08791 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Ebf3O08791 Coq6-203ENSMUST00000110278 1354 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
Ebf3O08791 Gm13425-201ENSMUST00000145389 5391 ntTSL 3 BASIC15.4■□□□□ 0.06
Ebf3O08791 Cyp2d10-201ENSMUST00000072776 1647 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Ebf3O08791 Mcm9-201ENSMUST00000075540 4882 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
Ebf3O08791 Rasgef1c-202ENSMUST00000093141 2120 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Ebf3O08791 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
Ebf3O08791 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC15.4■□□□□ 0.06
Ebf3O08791 Gm42893-201ENSMUST00000198035 1502 ntTSL 3 BASIC15.4■□□□□ 0.06
Ebf3O08791 Zfp90-203ENSMUST00000212606 2685 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Ebf3O08791 Tex22-202ENSMUST00000109729 735 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Ebf3O08791 Gm10044-204ENSMUST00000170177 659 ntTSL 3 BASIC15.4■□□□□ 0.06
Ebf3O08791 Styxl1-207ENSMUST00000177559 1236 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
Ebf3O08791 Gpx4-207ENSMUST00000183037 735 ntTSL 2 BASIC15.4■□□□□ 0.06
Ebf3O08791 AC166341.4-201ENSMUST00000220625 123 ntBASIC15.4■□□□□ 0.06
Ebf3O08791 AC126408.1-201ENSMUST00000225184 523 ntBASIC15.4■□□□□ 0.06
Ebf3O08791 1700018B24Rik-201ENSMUST00000036023 593 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Ebf3O08791 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Ebf3O08791 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Ebf3O08791 Nfya-206ENSMUST00000160319 1407 ntTSL 5 BASIC15.4■□□□□ 0.06
Ebf3O08791 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Ebf3O08791 Tbc1d20-201ENSMUST00000028963 3386 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Ebf3O08791 Klhl26-204ENSMUST00000209567 2615 ntTSL 3 BASIC15.4■□□□□ 0.06
Ebf3O08791 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC15.4■□□□□ 0.06
Ebf3O08791 Osr2-201ENSMUST00000022952 1724 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Ebf3O08791 G2e3-202ENSMUST00000119211 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Ebf3O08791 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Ebf3O08791 Myog-201ENSMUST00000027730 1495 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Ebf3O08791 Mus81-202ENSMUST00000124334 2067 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Ebf3O08791 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Ebf3O08791 Spcs2-201ENSMUST00000036274 2909 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Ebf3O08791 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
Ebf3O08791 Ttc14-202ENSMUST00000108210 2684 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
Ebf3O08791 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC15.39■□□□□ 0.05
Ebf3O08791 Gm7336-201ENSMUST00000107041 1232 ntBASIC15.39■□□□□ 0.05
Ebf3O08791 Cops9-202ENSMUST00000112999 653 ntTSL 3 BASIC15.39■□□□□ 0.05
Ebf3O08791 Tpm3-203ENSMUST00000119158 1090 ntTSL 3 BASIC15.39■□□□□ 0.05
Ebf3O08791 Pam16-201ENSMUST00000014445 596 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Ebf3O08791 2210408F21Rik-210ENSMUST00000151076 539 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Ebf3O08791 Med22-201ENSMUST00000015920 973 ntAPPRIS P4 TSL 2 BASIC15.39■□□□□ 0.05
Ebf3O08791 Gm17399-201ENSMUST00000181824 1181 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Ebf3O08791 Gm34964-201ENSMUST00000207398 417 ntTSL 5 BASIC15.39■□□□□ 0.05
Ebf3O08791 Gzma-201ENSMUST00000023897 878 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Ebf3O08791 Mrpl4-201ENSMUST00000003386 1288 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Ebf3O08791 Dnal1-201ENSMUST00000046340 790 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Ebf3O08791 Zgpat-201ENSMUST00000029105 2293 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Ebf3O08791 Tmod2-207ENSMUST00000215462 1564 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Ebf3O08791 Trim63-201ENSMUST00000030638 1855 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
Ebf3O08791 Fkbp10-202ENSMUST00000107400 1467 ntTSL 5 BASIC15.39■□□□□ 0.05
Ebf3O08791 Cpz-201ENSMUST00000038676 2245 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Ebf3O08791 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
Ebf3O08791 Syn1-202ENSMUST00000115345 3261 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 24.5 ms