Protein–RNA interactions for Protein: O08602

Raet1a, Retinoic acid early-inducible protein 1-alpha, mousemouse

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Raet1aO08602 9330121J05Rik-201ENSMUST00000192267 3009 ntBASIC13.15□□□□□ -0.3
Raet1aO08602 Poli-201ENSMUST00000043286 2591 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Raet1aO08602 Synm-204ENSMUST00000208231 4457 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Raet1aO08602 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Raet1aO08602 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Raet1aO08602 Col7a1-202ENSMUST00000112070 9250 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Raet1aO08602 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.31
Raet1aO08602 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Raet1aO08602 Rxra-202ENSMUST00000100251 1952 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Raet1aO08602 4930402H24Rik-202ENSMUST00000110243 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Raet1aO08602 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Raet1aO08602 Klc1-203ENSMUST00000120544 2261 ntAPPRIS ALT1 TSL 5 BASIC13.14□□□□□ -0.31
Raet1aO08602 Mbtd1-202ENSMUST00000063718 3785 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Raet1aO08602 Ldlrap1-201ENSMUST00000037828 6549 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Raet1aO08602 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Raet1aO08602 Meig1-203ENSMUST00000115082 603 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Raet1aO08602 Pcp2-205ENSMUST00000142431 524 ntTSL 2 BASIC13.14□□□□□ -0.31
Raet1aO08602 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Raet1aO08602 Vmn2r-ps89-201ENSMUST00000209195 1010 ntBASIC13.14□□□□□ -0.31
Raet1aO08602 Tmem116-204ENSMUST00000111795 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Raet1aO08602 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Raet1aO08602 Gm42632-201ENSMUST00000201707 2411 ntBASIC13.14□□□□□ -0.31
Raet1aO08602 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Raet1aO08602 Pim1-201ENSMUST00000024811 2638 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Raet1aO08602 Wdr90-201ENSMUST00000079461 5991 ntAPPRIS P2 TSL 5 BASIC13.14□□□□□ -0.31
Raet1aO08602 4930513N10Rik-203ENSMUST00000145562 2803 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Raet1aO08602 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
Raet1aO08602 Map7d1-203ENSMUST00000122129 3249 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Raet1aO08602 Fbxl19-201ENSMUST00000033081 3410 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Raet1aO08602 Sympk-201ENSMUST00000023882 4116 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Raet1aO08602 C2cd2l-201ENSMUST00000065080 4337 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Raet1aO08602 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC13.14□□□□□ -0.31
Raet1aO08602 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Raet1aO08602 2810474O19Rik-202ENSMUST00000100765 5356 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Raet1aO08602 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Raet1aO08602 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
Raet1aO08602 Lrriq4-202ENSMUST00000108267 2387 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
Raet1aO08602 Cdkn1b-201ENSMUST00000003115 2393 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Raet1aO08602 Csnk1g1-212ENSMUST00000206048 2073 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
Raet1aO08602 Fam167a-201ENSMUST00000121288 4231 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Raet1aO08602 Mras-202ENSMUST00000119472 1190 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Raet1aO08602 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC13.13□□□□□ -0.31
Raet1aO08602 Gm13375-201ENSMUST00000126967 854 ntTSL 2 BASIC13.13□□□□□ -0.31
Raet1aO08602 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC13.13□□□□□ -0.31
Raet1aO08602 Ino80dos-204ENSMUST00000188602 678 ntTSL 2 BASIC13.13□□□□□ -0.31
Raet1aO08602 Psmb5-202ENSMUST00000227257 622 ntBASIC13.13□□□□□ -0.31
Raet1aO08602 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Raet1aO08602 Neurl2-201ENSMUST00000042775 1014 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Raet1aO08602 Klk15-201ENSMUST00000068625 845 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Raet1aO08602 Mdk-202ENSMUST00000069423 773 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Raet1aO08602 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC13.13□□□□□ -0.31
Raet1aO08602 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC13.13□□□□□ -0.31
Raet1aO08602 Dnajc27-202ENSMUST00000049584 2934 ntAPPRIS P1 TSL 2 BASIC13.13□□□□□ -0.31
Raet1aO08602 Adamts2-201ENSMUST00000040523 7266 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Raet1aO08602 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC13.13□□□□□ -0.31
Raet1aO08602 Mccc2-201ENSMUST00000022148 2123 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Raet1aO08602 Zfp606-201ENSMUST00000098822 4748 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
Raet1aO08602 Gm10605-202ENSMUST00000183019 3198 ntBASIC13.13□□□□□ -0.31
Raet1aO08602 Arid3a-203ENSMUST00000105377 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Raet1aO08602 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Raet1aO08602 Gm5069-201ENSMUST00000050581 1328 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Raet1aO08602 Garem2-201ENSMUST00000058045 3865 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
Raet1aO08602 Syndig1-201ENSMUST00000109934 2081 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
Raet1aO08602 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Raet1aO08602 Rgs20-201ENSMUST00000002533 1778 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Raet1aO08602 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Raet1aO08602 Vopp1-204ENSMUST00000145608 4590 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Raet1aO08602 Cadm2-203ENSMUST00000120898 2768 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Raet1aO08602 Reps2-202ENSMUST00000112334 7675 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Raet1aO08602 Gm45546-201ENSMUST00000211053 2394 ntBASIC13.12□□□□□ -0.31
Raet1aO08602 Mcidas-201ENSMUST00000092089 2377 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Raet1aO08602 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Raet1aO08602 Nkd2-202ENSMUST00000118096 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Raet1aO08602 Lpcat2-201ENSMUST00000046290 2811 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Raet1aO08602 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC13.12□□□□□ -0.31
Raet1aO08602 Naa10-203ENSMUST00000114387 979 ntAPPRIS ALT2 TSL 2 BASIC13.12□□□□□ -0.31
Raet1aO08602 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC13.12□□□□□ -0.31
Raet1aO08602 Mir7036b-201ENSMUST00000184791 63 ntBASIC13.12□□□□□ -0.31
Raet1aO08602 Gm29202-201ENSMUST00000191263 422 ntTSL 5 BASIC13.12□□□□□ -0.31
Raet1aO08602 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC13.12□□□□□ -0.31
Raet1aO08602 Bpifa3-201ENSMUST00000028984 1107 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Raet1aO08602 Chac1-201ENSMUST00000028780 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Raet1aO08602 Aph1a-202ENSMUST00000056710 1601 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Raet1aO08602 Mfsd6l-201ENSMUST00000053211 2060 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
Raet1aO08602 Kdm6b-201ENSMUST00000094077 6654 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
Raet1aO08602 Wdr31-203ENSMUST00000120095 2549 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Raet1aO08602 Pou2f3-202ENSMUST00000176636 2522 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Raet1aO08602 Gm17108-201ENSMUST00000168625 2877 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Raet1aO08602 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Raet1aO08602 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Raet1aO08602 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Raet1aO08602 Zyg11b-201ENSMUST00000043616 8691 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Raet1aO08602 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Raet1aO08602 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Raet1aO08602 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Raet1aO08602 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Raet1aO08602 Fam76b-201ENSMUST00000059579 3702 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Raet1aO08602 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Raet1aO08602 Ghdc-201ENSMUST00000017891 2462 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Raet1aO08602 Rhoj-202ENSMUST00000118602 2396 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 45.4 ms