Protein–RNA interactions for Protein: J3QP07

B020004C17Rik, RIKEN cDNA B020004C17 gene, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
B020004C17RikJ3QP07 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
B020004C17RikJ3QP07 Jakmip1-212ENSMUST00000174629 1941 ntTSL 5 BASIC16.45■□□□□ 0.22
B020004C17RikJ3QP07 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
B020004C17RikJ3QP07 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
B020004C17RikJ3QP07 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
B020004C17RikJ3QP07 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
B020004C17RikJ3QP07 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
B020004C17RikJ3QP07 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
B020004C17RikJ3QP07 Zfp422-203ENSMUST00000112880 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
B020004C17RikJ3QP07 Gm21981-201ENSMUST00000143789 2721 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
B020004C17RikJ3QP07 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
B020004C17RikJ3QP07 Gm15460-201ENSMUST00000118147 391 ntBASIC16.45■□□□□ 0.22
B020004C17RikJ3QP07 Sec11a-203ENSMUST00000119980 903 ntTSL 2 BASIC16.45■□□□□ 0.22
B020004C17RikJ3QP07 Tmem109-207ENSMUST00000147699 1096 ntTSL 2 BASIC16.45■□□□□ 0.22
B020004C17RikJ3QP07 Gm9002-201ENSMUST00000178437 499 ntBASIC16.45■□□□□ 0.22
B020004C17RikJ3QP07 Gm26600-201ENSMUST00000181637 1256 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
B020004C17RikJ3QP07 Mir7085-201ENSMUST00000184353 66 ntBASIC16.45■□□□□ 0.22
B020004C17RikJ3QP07 Ffar3-202ENSMUST00000185748 1234 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
B020004C17RikJ3QP07 Gm38293-201ENSMUST00000193209 600 ntTSL 2 BASIC16.45■□□□□ 0.22
B020004C17RikJ3QP07 9230114J08Rik-201ENSMUST00000200375 350 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
B020004C17RikJ3QP07 AC158987.1-201ENSMUST00000214586 961 ntTSL 5 BASIC16.45■□□□□ 0.22
B020004C17RikJ3QP07 Fkbp2-201ENSMUST00000070878 642 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
B020004C17RikJ3QP07 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
B020004C17RikJ3QP07 Pou5f1-201ENSMUST00000025271 1362 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
B020004C17RikJ3QP07 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC16.45■□□□□ 0.22
B020004C17RikJ3QP07 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
B020004C17RikJ3QP07 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
B020004C17RikJ3QP07 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
B020004C17RikJ3QP07 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
B020004C17RikJ3QP07 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
B020004C17RikJ3QP07 Esr1-202ENSMUST00000105588 2733 ntTSL 5 BASIC16.45■□□□□ 0.22
B020004C17RikJ3QP07 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
B020004C17RikJ3QP07 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC16.44■□□□□ 0.22
B020004C17RikJ3QP07 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
B020004C17RikJ3QP07 Ablim2-202ENSMUST00000101280 3042 ntTSL 5 BASIC16.44■□□□□ 0.22
B020004C17RikJ3QP07 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
B020004C17RikJ3QP07 Exoc6-201ENSMUST00000066439 2729 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
B020004C17RikJ3QP07 Pla2g2e-203ENSMUST00000105804 786 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
B020004C17RikJ3QP07 Sumo2-204ENSMUST00000118155 884 ntTSL 2 BASIC16.44■□□□□ 0.22
B020004C17RikJ3QP07 Gm17150-201ENSMUST00000165577 381 ntBASIC16.44■□□□□ 0.22
B020004C17RikJ3QP07 Gm5354-201ENSMUST00000182417 973 ntBASIC16.44■□□□□ 0.22
B020004C17RikJ3QP07 Platr12-202ENSMUST00000189722 549 ntTSL 3 BASIC16.44■□□□□ 0.22
B020004C17RikJ3QP07 Mir124-2hg-206ENSMUST00000189754 525 ntTSL 3 BASIC16.44■□□□□ 0.22
B020004C17RikJ3QP07 Blvra-201ENSMUST00000002064 1160 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
B020004C17RikJ3QP07 Il13-201ENSMUST00000020650 1205 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
B020004C17RikJ3QP07 AC238811.3-201ENSMUST00000225422 709 ntBASIC16.44■□□□□ 0.22
B020004C17RikJ3QP07 AC154846.1-201ENSMUST00000226278 862 ntBASIC16.44■□□□□ 0.22
B020004C17RikJ3QP07 Pla2g2e-201ENSMUST00000030531 854 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
B020004C17RikJ3QP07 Wdr74-201ENSMUST00000049424 1204 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
B020004C17RikJ3QP07 Hist1h3b-201ENSMUST00000091703 620 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
B020004C17RikJ3QP07 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
B020004C17RikJ3QP07 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
B020004C17RikJ3QP07 Ralb-201ENSMUST00000004565 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
B020004C17RikJ3QP07 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
B020004C17RikJ3QP07 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
B020004C17RikJ3QP07 Clcc1-201ENSMUST00000029483 2224 ntAPPRIS P3 TSL 5 BASIC16.43■□□□□ 0.22
B020004C17RikJ3QP07 Gatsl3-201ENSMUST00000020699 1574 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
B020004C17RikJ3QP07 Lrriq4-202ENSMUST00000108267 2387 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
B020004C17RikJ3QP07 Gm40765-201ENSMUST00000218612 1469 ntTSL 5 BASIC16.43■□□□□ 0.22
B020004C17RikJ3QP07 Tmem59l-201ENSMUST00000045286 1491 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
B020004C17RikJ3QP07 Zgpat-201ENSMUST00000029105 2293 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
B020004C17RikJ3QP07 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
B020004C17RikJ3QP07 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC16.43■□□□□ 0.22
B020004C17RikJ3QP07 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
B020004C17RikJ3QP07 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC16.43■□□□□ 0.22
B020004C17RikJ3QP07 Gm15824-201ENSMUST00000119516 955 ntBASIC16.43■□□□□ 0.22
B020004C17RikJ3QP07 Chchd7-207ENSMUST00000121210 548 ntTSL 2 BASIC16.43■□□□□ 0.22
B020004C17RikJ3QP07 Gm16175-201ENSMUST00000128181 248 ntTSL 3 BASIC16.43■□□□□ 0.22
B020004C17RikJ3QP07 Gm11574-201ENSMUST00000139752 946 ntTSL 5 BASIC16.43■□□□□ 0.22
B020004C17RikJ3QP07 Ighv1-25-201ENSMUST00000195638 345 ntBASIC16.43■□□□□ 0.22
B020004C17RikJ3QP07 AC153872.1-201ENSMUST00000199539 128 ntBASIC16.43■□□□□ 0.22
B020004C17RikJ3QP07 Gm6266-201ENSMUST00000203844 806 ntBASIC16.43■□□□□ 0.22
B020004C17RikJ3QP07 Tnfrsf19-205ENSMUST00000225730 744 ntAPPRIS ALT2 BASIC16.43■□□□□ 0.22
B020004C17RikJ3QP07 Akr1b7-201ENSMUST00000007449 1281 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
B020004C17RikJ3QP07 Disp2-202ENSMUST00000063975 1505 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
B020004C17RikJ3QP07 Zic4-209ENSMUST00000173933 1764 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
B020004C17RikJ3QP07 Hadh-201ENSMUST00000029610 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
B020004C17RikJ3QP07 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
B020004C17RikJ3QP07 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
B020004C17RikJ3QP07 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
B020004C17RikJ3QP07 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC16.43■□□□□ 0.22
B020004C17RikJ3QP07 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC16.43■□□□□ 0.22
B020004C17RikJ3QP07 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
B020004C17RikJ3QP07 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
B020004C17RikJ3QP07 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC16.42■□□□□ 0.22
B020004C17RikJ3QP07 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
B020004C17RikJ3QP07 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
B020004C17RikJ3QP07 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC16.42■□□□□ 0.22
B020004C17RikJ3QP07 Defb30-203ENSMUST00000111208 503 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
B020004C17RikJ3QP07 Defb30-204ENSMUST00000111209 721 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
B020004C17RikJ3QP07 Flg-208ENSMUST00000180308 1076 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
B020004C17RikJ3QP07 Gm28198-201ENSMUST00000190938 471 ntTSL 3 BASIC16.42■□□□□ 0.22
B020004C17RikJ3QP07 2900092O11Rik-201ENSMUST00000191770 755 ntBASIC16.42■□□□□ 0.22
B020004C17RikJ3QP07 Tmem107-201ENSMUST00000075980 779 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
B020004C17RikJ3QP07 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
B020004C17RikJ3QP07 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
B020004C17RikJ3QP07 Gapdh-203ENSMUST00000118875 1420 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
B020004C17RikJ3QP07 Wisp3-201ENSMUST00000076713 1419 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
B020004C17RikJ3QP07 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC16.42■□□□□ 0.22
B020004C17RikJ3QP07 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 30.1 ms